Feasibility and Impact of Embedding an Extended DNA and RNA Tissue-Based Sequencing Panel for the Routine Care of Patients with Advanced Melanoma in Spain.


Journal

International journal of molecular sciences
ISSN: 1422-0067
Titre abrégé: Int J Mol Sci
Pays: Switzerland
ID NLM: 101092791

Informations de publication

Date de publication:
25 Jun 2024
Historique:
received: 09 05 2024
revised: 18 06 2024
accepted: 21 06 2024
medline: 13 7 2024
pubmed: 13 7 2024
entrez: 13 7 2024
Statut: epublish

Résumé

Targeted NGS allows a fast and efficient multi-gene analysis and the detection of key gene aberrations in melanoma. In this study, we aim to describe the genetic alterations in a series of 87 melanoma cases using the oncomine focus assay (OFA), relate these results with the clinicopathological features of the patients, and compare them with our previous study results in which we used a smaller panel, the oncomine solid tumor (OST) DNA kit. Patients diagnosed with advanced melanoma at our center from 2020 to 2022 were included and DNA and RNA were extracted for sequencing. Common mutated genes were

Identifiants

pubmed: 39000050
pii: ijms25136942
doi: 10.3390/ijms25136942
pii:
doi:

Substances chimiques

Proto-Oncogene Proteins B-raf EC 2.7.11.1
BRAF protein, human EC 2.7.11.1
Biomarkers, Tumor 0

Types de publication

Journal Article

Langues

eng

Sous-ensembles de citation

IM

Déclaration de conflit d'intérêts

C.T. declared no competing non-financial interests but reported advisory and consulting fees from Merck Sharp and Dohme (MSD), Novartis, and AstraZeneca, lecture fees from Roche, Pfizer, Biocartis, and MSD, and research from Novartis and AstraZeneca. Other authors declare no conflicts of interest.

Auteurs

Natalia Castrejon (N)

Department of Pathology, Hospital Clinic, University of Barcelona, 08036 Barcelona, Spain.
August Pi i Sunyer Biomedical Research Institute (IDIBAPS), Rosselló 149, 08036 Barcelona, Spain.

Roberto Martin (R)

Department of Medical Oncology, Hospital Clinic, University of Barcelona, 08036 Barcelona, Spain.

Antonio Carrasco (A)

Department of Pathology, Hospital Clinic, University of Barcelona, 08036 Barcelona, Spain.

Paola Castillo (P)

Department of Pathology, Hospital Clinic, University of Barcelona, 08036 Barcelona, Spain.
August Pi i Sunyer Biomedical Research Institute (IDIBAPS), Rosselló 149, 08036 Barcelona, Spain.

Adriana Garcia (A)

Department of Pathology, Hospital Clinic, University of Barcelona, 08036 Barcelona, Spain.
August Pi i Sunyer Biomedical Research Institute (IDIBAPS), Rosselló 149, 08036 Barcelona, Spain.

Raquel Albero-González (R)

Department of Pathology, Hospital Clinic, University of Barcelona, 08036 Barcelona, Spain.
August Pi i Sunyer Biomedical Research Institute (IDIBAPS), Rosselló 149, 08036 Barcelona, Spain.

Mireia García (M)

Department of Pathology, Hospital Clinic, University of Barcelona, 08036 Barcelona, Spain.

Marta Marginet (M)

Department of Pathology, Hospital Clinic, University of Barcelona, 08036 Barcelona, Spain.

Núria Palau (N)

Molecular Biology Core Facility, Hospital Clínic, 08036 Barcelona, Spain.

Mónica Hernández (M)

Department of Pathology, Hospital Clinic, University of Barcelona, 08036 Barcelona, Spain.

Carla Montironi (C)

Department of Pathology, Hospital Clinic, University of Barcelona, 08036 Barcelona, Spain.
August Pi i Sunyer Biomedical Research Institute (IDIBAPS), Rosselló 149, 08036 Barcelona, Spain.
Molecular Biology Core Facility, Hospital Clínic, 08036 Barcelona, Spain.

Guillem Clot (G)

August Pi i Sunyer Biomedical Research Institute (IDIBAPS), Rosselló 149, 08036 Barcelona, Spain.
Department of Basic Clinical Practice, Faculty of Medicine and Health Sciences, University of Barcelona, 08036 Barcelona, Spain.

Ana Arance (A)

August Pi i Sunyer Biomedical Research Institute (IDIBAPS), Rosselló 149, 08036 Barcelona, Spain.
Department of Medical Oncology, Hospital Clinic, University of Barcelona, 08036 Barcelona, Spain.

Llucia Alos (L)

Department of Pathology, Hospital Clinic, University of Barcelona, 08036 Barcelona, Spain.
August Pi i Sunyer Biomedical Research Institute (IDIBAPS), Rosselló 149, 08036 Barcelona, Spain.

Cristina Teixido (C)

Department of Pathology, Hospital Clinic, University of Barcelona, 08036 Barcelona, Spain.
August Pi i Sunyer Biomedical Research Institute (IDIBAPS), Rosselló 149, 08036 Barcelona, Spain.
Molecular Biology Core Facility, Hospital Clínic, 08036 Barcelona, Spain.

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Classifications MeSH