The impact of fungi on soil protist communities in European cereal croplands.


Journal

Environmental microbiology
ISSN: 1462-2920
Titre abrégé: Environ Microbiol
Pays: England
ID NLM: 100883692

Informations de publication

Date de publication:
Jul 2024
Historique:
received: 04 05 2023
accepted: 04 06 2024
medline: 13 7 2024
pubmed: 13 7 2024
entrez: 13 7 2024
Statut: ppublish

Résumé

Protists, a crucial part of the soil food web, are increasingly acknowledged as significant influencers of nutrient cycling and plant performance in farmlands. While topographical and climatic factors are often considered to drive microbial communities on a continental scale, higher trophic levels like heterotrophic protists also rely on their food sources. In this context, bacterivores have received more attention than fungivores. Our study explored the connection between the community composition of protists (specifically Rhizaria and Cercozoa) and fungi across 156 cereal fields in Europe, spanning a latitudinal gradient of 3000 km. We employed a machine-learning approach to measure the significance of fungal communities in comparison to bacterial communities, soil abiotic factors, and climate as determinants of the Cercozoa community composition. Our findings indicate that climatic variables and fungal communities are the primary drivers of cercozoan communities, accounting for 70% of their community composition. Structural equation modelling (SEM) unveiled indirect climatic effects on the cercozoan communities through a change in the composition of the fungal communities. Our data also imply that fungivory might be more prevalent among protists than generally believed. This study uncovers a hidden facet of the soil food web, suggesting that the benefits of microbial diversity could be more effectively integrated into sustainable agriculture practices.

Identifiants

pubmed: 39001572
doi: 10.1111/1462-2920.16673
doi:

Substances chimiques

Soil 0

Types de publication

Journal Article

Langues

eng

Sous-ensembles de citation

IM

Pagination

e16673

Subventions

Organisme : Swiss National Science Foundation
ID : 31BD30-172462
Pays : Switzerland
Organisme : Deutsche Forschungsgemeinschaft
ID : 317895346
Organisme : Deutsche Forschungsgemeinschaft
ID : 403635931
Organisme : Swedish Research Council FORMAS
ID : 2016-0194
Organisme : Ministerio de Economía y Competitividad
ID : PCIN-2016-028
Organisme : Agence Nationale de la Recherche in France
ID : ANR-16-EBI3-0004-01

Informations de copyright

© 2024 The Author(s). Environmental Microbiology published by John Wiley & Sons Ltd.

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Auteurs

Florine Degrune (F)

Institute of Biology, Freie Universität Berlin, Berlin, Germany.
Berlin-Brandenburg Institute of Advanced Biodiversity Research, Berlin, Germany.
Eco&Sols, Univ Montpellier, CIRAD, INRAE, Institut Agro, IRD, Montpellier, France.
CIRAD, UMR Eco&Sols, Montpellier, France.

Kenneth Dumack (K)

Terrestrial Ecology, Institute of Zoology, University of Cologne, Köln, Germany.
Cluster of Excellence on Plant Sciences (CEPLAS), University of Cologne, Cologne, Germany.

Masahiro Ryo (M)

Leibniz Centre for Agricultural Landscape Research (ZALF), Müncheberg, Germany.
Brandenburg University of Technology Cottbus-Senftenberg, Cottbus, Germany.

Gina Garland (G)

Agroscope, Plant-Soil Interactions Group, Zurich, Switzerland.
Agroscope, Soil Quality and Use Group, Zurich, Switzerland.
Department of Environmental System Sciences, Soil Resources Group, ETH Zurich, Zurich, Switzerland.

Sana Romdhane (S)

Department of Agroecology, University of Bourgogne Franche-Comté, INRAE, AgroSup Dijon, Dijon, France.

Aurélien Saghaï (A)

Department of Forest Mycology and Plant Pathology, Swedish University of Agricultural Sciences, Uppsala, Sweden.

Samiran Banerjee (S)

Department of Microbiological Sciences, North Dakota State University, Fargo, North Dakota, USA.

Anna Edlinger (A)

Agroscope, Plant-Soil Interactions Group, Zurich, Switzerland.
Wageningen Environmental Research, Wageningen University & Research, Wageningen, The Netherlands.

Chantal Herzog (C)

Agroscope, Plant-Soil Interactions Group, Zurich, Switzerland.
Department of Plant and Microbial Biology, University of Zurich, Zurich, Switzerland.

David S Pescador (DS)

Departamento de Farmacología, Farmacognosia y Botánica, Facultad de Farmacia, Universidad Complutense de Madrid, Madrid, Spain.
Departamento de Biología y Geología, Física y Química Inorgánica, Escuela Superior de Ciencias Experimentales y Tecnología, Universidad Rey Juan Carlos, Móstoles, Spain.

Pablo García-Palacios (P)

Instituto de Ciencias Agrarias, Consejo Superior de Investigaciones Científicas, Madrid, Spain.

Anna Maria Fiore-Donno (AM)

Terrestrial Ecology, Institute of Zoology, University of Cologne, Köln, Germany.
Cluster of Excellence on Plant Sciences (CEPLAS), University of Cologne, Cologne, Germany.

Michael Bonkowski (M)

Terrestrial Ecology, Institute of Zoology, University of Cologne, Köln, Germany.
Cluster of Excellence on Plant Sciences (CEPLAS), University of Cologne, Cologne, Germany.

Sara Hallin (S)

Department of Forest Mycology and Plant Pathology, Swedish University of Agricultural Sciences, Uppsala, Sweden.

Marcel G A van der Heijden (MGA)

Agroscope, Plant-Soil Interactions Group, Zurich, Switzerland.
Department of Plant and Microbial Biology, University of Zurich, Zurich, Switzerland.

Fernando T Maestre (FT)

Environmental Sciences and Engineering, Biological and Environmental Science and Engineering Division, King Abdullah University of Science and Technology, Thuwal, Kingdom of Saudi Arabia.

Laurent Philippot (L)

Department of Agroecology, University of Bourgogne Franche-Comté, INRAE, AgroSup Dijon, Dijon, France.

Michael Glemnitz (M)

Leibniz Centre for Agricultural Landscape Research (ZALF), Müncheberg, Germany.

Klaus Sieling (K)

Institute of Crop Science and Plant Breeding, Christian-Albrechts-University, Kiel, Germany.

Matthias C Rillig (MC)

Institute of Biology, Freie Universität Berlin, Berlin, Germany.
Berlin-Brandenburg Institute of Advanced Biodiversity Research, Berlin, Germany.

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