Quantitative trait loci analysis for molecular markers linked to agricultural traits of Pleurotus ostreatus.


Journal

PloS one
ISSN: 1932-6203
Titre abrégé: PLoS One
Pays: United States
ID NLM: 101285081

Informations de publication

Date de publication:
2024
Historique:
received: 04 02 2024
accepted: 29 07 2024
medline: 12 8 2024
pubmed: 12 8 2024
entrez: 12 8 2024
Statut: epublish

Résumé

Pleurotus ostreatus is a global mushroom crop with nutritional and medicinal benefits. However, the genetic basis of several commercial traits remains unknown. To address this, we analyzed the quantitative trait loci (QTLs) for two representative cultivars, "Heuktari" and "Miso," with apparently distinct alleles. A genetic map with 11 linkage groups was constructed, in which 27 QTLs were assigned to 14 traits. The explained phenotypic variations in QTLs ranged from 7.8% to 22.0%. Relatively high LOD values of 6.190 and 5.485 were estimated for the pinheading period and the number of valid stipes, respectively. Some QTL-derived molecular markers showed potential enhancement rates of selection precision in inbred lines, especially for cap shape (50%) and cap thickness (30%). Candidate genes were inferred from the QTL regions and validated using qRT-PCR, particularly for the cysteine and glutathione pathway, in relation to cap yellowness. The molecular markers in this study are expected to facilitate the breeding of the Heuktari and Miso lines and provide probes to identify related genes in P. ostreatus.

Identifiants

pubmed: 39133731
doi: 10.1371/journal.pone.0308832
pii: PONE-D-24-04740
doi:

Substances chimiques

Genetic Markers 0

Types de publication

Journal Article

Langues

eng

Sous-ensembles de citation

IM

Pagination

e0308832

Informations de copyright

Copyright: © 2024 Ryu et al. This is an open access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.

Déclaration de conflit d'intérêts

The authors have declared that no competing interests exist.

Auteurs

Jae-San Ryu (JS)

Department of Mushroom Science, Korea National University of Agriculture and Fisheries, Jeonju, Jeonju-si, Jeollabuk-do, South Korea.

Bokyung Park (B)

Gyeongsangnam-do Agricultural Research and Extension Services, Jinju, Republic of Korea.

Arend F van Peer (AF)

Plant Breeding, Wageningen University and Research, PB Wageningen, The Netherlands.

Kyeong Sook Na (KS)

Department of Mushroom Science, Korea National University of Agriculture and Fisheries, Jeonju, Jeonju-si, Jeollabuk-do, South Korea.

Song Hee Lee (SH)

Plant Immunity Research Center, Seoul National University, Seoul, Republic of Korea.

Articles similaires

Genome, Chloroplast Phylogeny Genetic Markers Base Composition High-Throughput Nucleotide Sequencing
Capsicum Disease Resistance Plant Diseases Polymorphism, Single Nucleotide Ralstonia solanacearum
Animals Natural Killer T-Cells Mice Adipose Tissue Lipid Metabolism
Zea mays Triticum China Seasons Crops, Agricultural

Classifications MeSH