Studying the dynamics of the drug processing of pyrazinamide in Mycobacterium tuberculosis.


Journal

PloS one
ISSN: 1932-6203
Titre abrégé: PLoS One
Pays: United States
ID NLM: 101285081

Informations de publication

Date de publication:
2024
Historique:
received: 31 12 2023
accepted: 09 08 2024
medline: 31 8 2024
pubmed: 31 8 2024
entrez: 29 8 2024
Statut: epublish

Résumé

Pyrazinamide (PZA) is a key drug in the treatment of Mycobacterium tuberculosis. Although not completely understood yet, the bactericidal mechanism of PZA starts with its diffusion into the cell and subsequent conversion into pyrazinoic acid (POA) after the hydrolysis of ammonia group. This leads to the acidification cycle, which involves: (1) POA extrusion into the extracellular environment, (2) reentry of protonated POA, and (3) release of a proton into the cytoplasm, resulting in acidification of the cytoplasm and accumulation of intracellular POA. To better understand this process, we developed a system of coupled non-linear differential equations, which successfully recapitulates the kinetics of PZA/POA observed in M. tuberculosis. The parametric space was explored, assessing the impact of different PZA and pH concentrations and variations in the kinetic parameters, finding scenarios of PZA susceptibility and resistance. Furthermore, our predictions show that the acidification cycle alone is not enough to result in significant intracellular accumulation of POA in experimental time scales when compared to other neutral pH scenarios. Thus, revealing the need of novel hypotheses and experimental evidence to determine the missing mechanisms that may explain the pH-dependent intracellular accumulation of POA and their subsequent effects.

Identifiants

pubmed: 39208342
doi: 10.1371/journal.pone.0309352
pii: PONE-D-23-44222
doi:

Substances chimiques

Pyrazinamide 2KNI5N06TI
Antitubercular Agents 0
pyrazinoic acid 2WB23298SP

Types de publication

Journal Article

Langues

eng

Sous-ensembles de citation

IM

Pagination

e0309352

Informations de copyright

Copyright: © 2024 Requena et al. This is an open access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.

Déclaration de conflit d'intérêts

The authors have declared that no competing interests exist.

Auteurs

David Requena (D)

Laboratory of Bioinformatics and Molecular Biology, Laboratorios de Investigación y Desarrollo, Facultad de Ciencias e Ingeniería, Universidad Peruana Cayetano Heredia, Lima, San Martín de Porres, Peru.
Bioinformatics Group in Multi-Omics and Immunology, New York, NY, United States of America.

Rydberg R Supo-Escalante (RR)

Laboratory of Bioinformatics and Molecular Biology, Laboratorios de Investigación y Desarrollo, Facultad de Ciencias e Ingeniería, Universidad Peruana Cayetano Heredia, Lima, San Martín de Porres, Peru.
Bioinformatics Group in Multi-Omics and Immunology, New York, NY, United States of America.
Department of Systems Biology, Columbia University, New York, NY, United States of America.

Patricia Sheen (P)

Laboratory of Bioinformatics and Molecular Biology, Laboratorios de Investigación y Desarrollo, Facultad de Ciencias e Ingeniería, Universidad Peruana Cayetano Heredia, Lima, San Martín de Porres, Peru.

Mirko Zimic (M)

Laboratory of Bioinformatics and Molecular Biology, Laboratorios de Investigación y Desarrollo, Facultad de Ciencias e Ingeniería, Universidad Peruana Cayetano Heredia, Lima, San Martín de Porres, Peru.

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Classifications MeSH