Daniel Nettels

Affiliations

Department of Biochemistry, University of Zurich, 8057 Zurich, Switzerland.

Publications (21)

Depletion interactions modulate the binding between disordered proteins in crowded environments.

Proceedings of the National Academy of Sciences of the United States of America

Avec: Franziska Zosel , Andrea Soranno , Karin J Buholzer , Daniel Nettels , Benjamin Schuler

FRET-based dynamic structural biology: Challenges, perspectives and an appeal for open-science practices.

eLife

Avec: Eitan Lerner , Anders Barth , Jelle Hendrix , Benjamin Ambrose , Victoria Birkedal , Scott C Blanchard , Richard Börner , Hoi Sung Chung , Thorben Cordes , Timothy D Craggs , Ashok A Deniz , Jiajie Diao , Jingyi Fei , Ruben L Gonzalez , Irina V Gopich , Taekjip Ha , Christian A Hanke , Gilad Haran , Nikos S Hatzakis , Sungchul Hohng , Seok-Cheol Hong , Thorsten Hugel , Antonino Ingargiola , Chirlmin Joo , Achillefs N Kapanidis , Harold D Kim , Ted Laurence , Nam Ki Lee , Tae-Hee Lee , Edward A Lemke , Emmanuel Margeat , Jens Michaelis , Xavier Michalet , Sua Myong , Daniel Nettels , Thomas-Otavio Peulen , Evelyn Ploetz , Yair Razvag , Nicole C Robb , Benjamin Schuler , Hamid Soleimaninejad , Chun Tang , Reza Vafabakhsh , Don C Lamb , Claus Am Seidel , Shimon Weiss

Single-molecule Detection of Ultrafast Biomolecular Dynamics with Nanophotonics.

Journal of the American Chemical Society

Avec: Mark F Nüesch , Miloš T Ivanović , Jean-Benoît Claude , Daniel Nettels , Robert B Best , Jérôme Wenger , Benjamin Schuler

Rapid droplet-based mixing for single-molecule spectroscopy.

Nature methods

Avec: Tianjin Yang , Karin J Buholzer , Andrea Sottini , Xiaobao Cao , Andrew deMello , Daniel Nettels , Benjamin Schuler

Disordered RNA chaperones can enhance nucleic acid folding via local charge screening.

Nature communications

Avec: Erik D Holmstrom , Zhaowei Liu , Daniel Nettels , Robert B Best , Benjamin Schuler

Interaction Dynamics of Intrinsically Disordered Proteins from Single-Molecule Spectroscopy.

Annual review of biophysics

Avec: Aritra Chowdhury , Daniel Nettels , Benjamin Schuler

Multilayered allosteric modulation of coupled folding and binding by phosphorylation, peptidyl-prolyl cis/trans isomerization, and diversity of interaction partners.

The Journal of chemical physics

Avec: Karin J Buholzer , Jordan McIvor , Franziska Zosel , Christian Teppich , Daniel Nettels , Davide Mercadante , Benjamin Schuler

Extreme dynamics in a biomolecular condensate.

Nature

Avec: Nicola Galvanetto , Miloš T Ivanović , Aritra Chowdhury , Andrea Sottini , Mark F Nüesch , Daniel Nettels , Robert B Best , Benjamin Schuler

Binding without folding - the biomolecular function of disordered polyelectrolyte complexes.

Current opinion in structural biology

Avec: Benjamin Schuler , Alessandro Borgia , Madeleine B Borgia , Pétur O Heidarsson , Erik D Holmstrom , Daniel Nettels , Andrea Sottini

Structure-Guided Design of a Peptide Lock for Modular Peptide Binders.

ACS chemical biology

Avec: Patrick Ernst , Franziska Zosel , Christian Reichen , Daniel Nettels , Benjamin Schuler , Andreas Plückthun

Transition Path Dynamics of a Dielectric Particle in a Bistable Optical Trap.

Physical review letters

Avec: Niels Zijlstra , Daniel Nettels , Rohit Satija , Dmitrii E Makarov , Benjamin Schuler

Combining Rapid Microfluidic Mixing and Three-Color Single-Molecule FRET for Probing the Kinetics of Protein Conformational Changes.

The journal of physical chemistry. B

Avec: Stephan Benke , Andrea Holla , Bengt Wunderlich , Andrea Soranno , Daniel Nettels , Benjamin Schuler

Slow Escape from a Helical Misfolded State of the Pore-Forming Toxin Cytolysin A.

JACS Au

Avec: Fabian Dingfelder , Iuri Macocco , Stephan Benke , Daniel Nettels , Pietro Faccioli , Benjamin Schuler

Mesoscale properties of biomolecular condensates emerging from protein chain dynamics.

ArXiv

Avec: Nicola Galvanetto , Miloš T Ivanović , Simone A Del Grosso , Aritra Chowdhury , Andrea Sottini , Daniel Nettels , Robert B Best , Benjamin Schuler

Resolving distance variations by single-molecule FRET and EPR spectroscopy using rotamer libraries.

Biophysical journal

Avec: Daniel Klose , Andrea Holla , Christoph Gmeiner , Daniel Nettels , Irina Ritsch , Nadja Bross , Maxim Yulikov , Frédéric H-T Allain , Benjamin Schuler , Gunnar Jeschke

Impact of In-Cell and In-Vitro Crowding on the Conformations and Dynamics of an Intrinsically Disordered Protein.

Angewandte Chemie (International ed. in English)

Avec: Iwo König , Andrea Soranno , Daniel Nettels , Benjamin Schuler

Polyelectrolyte interactions enable rapid association and dissociation in high-affinity disordered protein complexes.

Nature communications

Avec: Andrea Sottini , Alessandro Borgia , Madeleine B Borgia , Katrine Bugge , Daniel Nettels , Aritra Chowdhury , Pétur O Heidarsson , Franziska Zosel , Robert B Best , Birthe B Kragelund , Benjamin Schuler

Release of linker histone from the nucleosome driven by polyelectrolyte competition with a disordered protein.

Nature chemistry

Avec: Pétur O Heidarsson , Davide Mercadante , Andrea Sottini , Daniel Nettels , Madeleine B Borgia , Alessandro Borgia , Sinan Kilic , Beat Fierz , Robert B Best , Benjamin Schuler

Driving forces of the complex formation between highly charged disordered proteins.

Proceedings of the National Academy of Sciences of the United States of America

Avec: Aritra Chowdhury , Alessandro Borgia , Souradeep Ghosh , Andrea Sottini , Soumik Mitra , Rohan S Eapen , Madeleine B Borgia , Tianjin Yang , Nicola Galvanetto , Miloš T Ivanović , Paweł Łukijańczuk , Ruijing Zhu , Daniel Nettels , Arindam Kundagrami , Benjamin Schuler

Time-resolved burst variance analysis.

Biophysical reports

Avec: Ivan Terterov , Daniel Nettels , Dmitrii E Makarov , Hagen Hofmann

Nanosecond chain dynamics of single-stranded nucleic acids.

Nature communications

Avec: Mark F Nüesch , Lisa Pietrek , Erik D Holmstrom , Daniel Nettels , Valentin von Roten , Rafael Kronenberg-Tenga , Ohad Medalia , Gerhard Hummer , Benjamin Schuler

Réseau de co-auteurs

Benjamin Schuler 20 collaborations

Andrea Sottini 7 collaborations

Robert B Best 6 collaborations

Aritra Chowdhury 5 collaborations

Franziska Zosel 4 collaborations

Miloš T Ivanović 4 collaborations

Alessandro Borgia 4 collaborations

Madeleine B Borgia 4 collaborations

Andrea Soranno 3 collaborations

Karin J Buholzer 3 collaborations

Mark F Nüesch 3 collaborations

Erik D Holmstrom 3 collaborations

Nicola Galvanetto 3 collaborations

Pétur O Heidarsson 3 collaborations

Tianjin Yang 2 collaborations

Davide Mercadante 2 collaborations

Dmitrii E Makarov 2 collaborations

Stephan Benke 2 collaborations

Andrea Holla 2 collaborations

Eitan Lerner 1 collaboration

Anders Barth 1 collaboration

Jelle Hendrix 1 collaboration

Benjamin Ambrose 1 collaboration

Victoria Birkedal 1 collaboration

Scott C Blanchard 1 collaboration

Richard Börner 1 collaboration

Hoi Sung Chung 1 collaboration

Thorben Cordes 1 collaboration

Timothy D Craggs 1 collaboration

Ashok A Deniz 1 collaboration

Jiajie Diao 1 collaboration

Jingyi Fei 1 collaboration

Ruben L Gonzalez 1 collaboration

Irina V Gopich 1 collaboration

Taekjip Ha 1 collaboration

Christian A Hanke 1 collaboration

Gilad Haran 1 collaboration

Nikos S Hatzakis 1 collaboration

Sungchul Hohng 1 collaboration

Seok-Cheol Hong 1 collaboration

Thorsten Hugel 1 collaboration

Antonino Ingargiola 1 collaboration

Chirlmin Joo 1 collaboration

Achillefs N Kapanidis 1 collaboration

Harold D Kim 1 collaboration

Ted Laurence 1 collaboration

Nam Ki Lee 1 collaboration

Tae-Hee Lee 1 collaboration

Edward A Lemke 1 collaboration

Emmanuel Margeat 1 collaboration

Jens Michaelis 1 collaboration

Xavier Michalet 1 collaboration

Sua Myong 1 collaboration

Thomas-Otavio Peulen 1 collaboration

Evelyn Ploetz 1 collaboration

Yair Razvag 1 collaboration

Nicole C Robb 1 collaboration

Hamid Soleimaninejad 1 collaboration

Chun Tang 1 collaboration

Reza Vafabakhsh 1 collaboration

Don C Lamb 1 collaboration

Claus Am Seidel 1 collaboration

Shimon Weiss 1 collaboration

Jean-Benoît Claude 1 collaboration

Jérôme Wenger 1 collaboration

Xiaobao Cao 1 collaboration

Andrew deMello 1 collaboration

Zhaowei Liu 1 collaboration

Jordan McIvor 1 collaboration

Christian Teppich 1 collaboration

Patrick Ernst 1 collaboration

Christian Reichen 1 collaboration

Andreas Plückthun 1 collaboration

Niels Zijlstra 1 collaboration

Rohit Satija 1 collaboration

Bengt Wunderlich 1 collaboration

Fabian Dingfelder 1 collaboration

Iuri Macocco 1 collaboration

Pietro Faccioli 1 collaboration

Simone A Del Grosso 1 collaboration

Daniel Klose 1 collaboration

Christoph Gmeiner 1 collaboration

Irina Ritsch 1 collaboration

Nadja Bross 1 collaboration

Maxim Yulikov 1 collaboration

Frédéric H-T Allain 1 collaboration

Gunnar Jeschke 1 collaboration

Iwo König 1 collaboration

Katrine Bugge 1 collaboration

Birthe B Kragelund 1 collaboration

Sinan Kilic 1 collaboration

Beat Fierz 1 collaboration

Souradeep Ghosh 1 collaboration

Soumik Mitra 1 collaboration

Rohan S Eapen 1 collaboration

Paweł Łukijańczuk 1 collaboration

Ruijing Zhu 1 collaboration

Arindam Kundagrami 1 collaboration

Ivan Terterov 1 collaboration

Hagen Hofmann 1 collaboration

Lisa Pietrek 1 collaboration

Valentin von Roten 1 collaboration

Rafael Kronenberg-Tenga 1 collaboration

Ohad Medalia 1 collaboration

Gerhard Hummer 1 collaboration