Dimitris Anastassiou

Affiliations
  • Department of Systems Biology, Columbia University, New York, NY, USA.
  • Center for Cancer Systems Therapeutics, Columbia University, New York, NY, USA.
  • Department of Electrical Engineering, Columbia University, New York, NY, USA.
  • Herbert Irving Comprehensive Cancer Center, Columbia University, New York, USA.

Publications (11)

A community effort to create standards for evaluating tumor subclonal reconstruction.

Nature biotechnology
Avec: Adriana Salcedo , Maxime Tarabichi , Shadrielle Melijah G Espiritu , Amit G Deshwar , Matei David , Nathan M Wilson , Stefan Dentro , Jeff A Wintersinger , Lydia Y Liu , Minjeong Ko , Srinivasan Sivanandan , Hongjiu Zhang , Kaiyi Zhu , Tai-Hsien Ou Yang , John M Chilton , Alex Buchanan , Christopher M Lalansingh , Christine P'ng , Catalina V Anghel , Imaad Umar , Bryan Lo , William Zou , Auteur inconnu , Jared T Simpson , Joshua M Stuart , Dimitris Anastassiou , Yuanfang Guan , Adam D Ewing , Kyle Ellrott , David C Wedge , Quaid Morris , Peter Van Loo , Paul C Boutros

Single-cell analysis reveals the pan-cancer invasiveness-associated transition of adipose-derived stromal cells into COL11A1-expressing cancer-associated fibroblasts.

PLoS computational biology
Avec: Kaiyi Zhu , Lingyi Cai , Chenqian Cui , Juan R de Los Toyos , Dimitris Anastassiou

A sequential Monte Carlo algorithm for inference of subclonal structure in cancer.

PloS one
Avec: Oyetunji E Ogundijo , Kaiyi Zhu , Xiaodong Wang , Dimitris Anastassiou

The fibro-adipogenic progenitor APOD+DCN+LUM+ cell population in aggressive carcinomas.

Cancer metastasis reviews
Avec: Lingyi Cai , Mikhail G Kolonin , Dimitris Anastassiou

Characterizing Intra-Tumor Heterogeneity From Somatic Mutations Without Copy-Neutral Assumption.

IEEE/ACM transactions on computational biology and bioinformatics
Avec: Oyetunji E Ogundijo , Kaiyi Zhu , Xiaodong Wang , Dimitris Anastassiou

Adipose Stromal Cell-Derived Cancer-Associated Fibroblasts Suppress FGFR Inhibitor Efficacy.

Cancer research
Avec: Mikhail G Kolonin , Dimitris Anastassiou

Crowd-sourced benchmarking of single-sample tumor subclonal reconstruction.

Nature biotechnology
Avec: Adriana Salcedo , Maxime Tarabichi , Alex Buchanan , Shadrielle M G Espiritu , Hongjiu Zhang , Kaiyi Zhu , Tai-Hsien Ou Yang , Ignaty Leshchiner , Dimitris Anastassiou , Yuanfang Guan , Gun Ho Jang , Mohammed F E Mootor , Kerstin Haase , Amit G Deshwar , William Zou , Imaad Umar , Stefan Dentro , Jeff A Wintersinger , Kami Chiotti , Jonas Demeulemeester , Clemency Jolly , Lesia Sycza , Minjeong Ko , Auteur inconnu , Auteur inconnu , David C Wedge , Quaid D Morris , Kyle Ellrott , Peter Van Loo , Paul C Boutros

Meta-analysis of expression and methylation signatures indicates a stress-related epigenetic mechanism in multiple neuropsychiatric disorders.

Translational psychiatry
Avec: Kaiyi Zhu , Tai-Hsien Ou Yang , Vincent Dorie , Tian Zheng , Dimitris Anastassiou

2DImpute: imputation in single-cell RNA-seq data from correlations in two dimensions.

Bioinformatics (Oxford, England)
Avec: Kaiyi Zhu , Dimitris Anastassiou

Pan-cancer driver copy number alterations identified by joint expression/CNA data analysis.

Scientific reports
Avec: Gaojianyong Wang , Dimitris Anastassiou

CASCC: a co-expression assisted single-cell RNA-seq data clustering method.

Bioinformatics (Oxford, England)
Avec: Lingyi Cai , Dimitris Anastassiou

Réseau de co-auteurs

Kaiyi Zhu 7 collaborations
Tai-Hsien Ou Yang 3 collaborations
None None 3 collaborations
Lingyi Cai 3 collaborations
Adriana Salcedo 2 collaborations
Maxime Tarabichi 2 collaborations
Amit G Deshwar 2 collaborations
Stefan Dentro 2 collaborations
Jeff A Wintersinger 2 collaborations
Minjeong Ko 2 collaborations
Hongjiu Zhang 2 collaborations
Alex Buchanan 2 collaborations
Imaad Umar 2 collaborations
William Zou 2 collaborations
Yuanfang Guan 2 collaborations
Kyle Ellrott 2 collaborations
David C Wedge 2 collaborations
Peter Van Loo 2 collaborations
Paul C Boutros 2 collaborations
Oyetunji E Ogundijo 2 collaborations
Xiaodong Wang 2 collaborations
Mikhail G Kolonin 2 collaborations
Shadrielle Melijah G Espiritu 1 collaboration
Matei David 1 collaboration
Nathan M Wilson 1 collaboration
Lydia Y Liu 1 collaboration
Srinivasan Sivanandan 1 collaboration
John M Chilton 1 collaboration
Christopher M Lalansingh 1 collaboration
Christine P'ng 1 collaboration
Catalina V Anghel 1 collaboration
Bryan Lo 1 collaboration
Jared T Simpson 1 collaboration
Joshua M Stuart 1 collaboration
Adam D Ewing 1 collaboration
Quaid Morris 1 collaboration
Chenqian Cui 1 collaboration
Juan R de Los Toyos 1 collaboration
Shadrielle M G Espiritu 1 collaboration
Ignaty Leshchiner 1 collaboration
Gun Ho Jang 1 collaboration
Mohammed F E Mootor 1 collaboration
Kerstin Haase 1 collaboration
Kami Chiotti 1 collaboration
Jonas Demeulemeester 1 collaboration
Clemency Jolly 1 collaboration
Lesia Sycza 1 collaboration
Quaid D Morris 1 collaboration
Vincent Dorie 1 collaboration
Tian Zheng 1 collaboration
Gaojianyong Wang 1 collaboration