Eric Shea-Brown

Publications (20)

Transition to chaos separates learning regimes and relates to measure of consciousness in recurrent neural networks.

bioRxiv : the preprint server for biology

Avec: Dana Mastrovito , Yuhan Helena Liu , Lukasz Kusmierz , Eric Shea-Brown , Christof Koch , Stefan Mihalas

Autoencoder networks extract latent variables and encode these variables in their connectomes.

Neural networks : the official journal of the International Neural Network Society

Avec: Matthew Farrell , Stefano Recanatesi , R Clay Reid , Stefan Mihalas , Eric Shea-Brown

High-resolution data-driven model of the mouse connectome.

Network neuroscience (Cambridge, Mass.)

Avec: Joseph E Knox , Kameron Decker Harris , Nile Graddis , Jennifer D Whitesell , Hongkui Zeng , Julie A Harris , Eric Shea-Brown , Stefan Mihalas

Heterogeneity in Neuronal Dynamics Is Learned by Gradient Descent for Temporal Processing Tasks.

Neural computation

Avec: Chloe N Winston , Dana Mastrovito , Eric Shea-Brown , Stefan Mihalas

Evolutionary algorithms as an alternative to backpropagation for supervised training of Biophysical Neural Networks and Neural ODEs.

ArXiv

Avec: James Hazelden , Yuhan Helena Liu , Eli Shlizerman , Eric Shea-Brown

Cell-type-specific neuromodulation guides synaptic credit assignment in a spiking neural network.

Proceedings of the National Academy of Sciences of the United States of America

Avec: Yuhan Helena Liu , Stephen Smith , Stefan Mihalas , Eric Shea-Brown , Uygar Sümbül

Identification of Multiple Noise Sources Improves Estimation of Neural Responses across Stimulus Conditions.

eNeuro

Avec: Alison I Weber , Eric Shea-Brown , Fred Rieke

Expressive probabilistic sampling in recurrent neural networks.

ArXiv

Avec: Shirui Chen , Linxing Preston Jiang , Rajesh P N Rao , Eric Shea-Brown

Network Dynamics Governed by Lyapunov Functions: From Memory to Classification.

Trends in neurosciences

Avec: Merav Stern , Eric Shea-Brown

A large-scale standardized physiological survey reveals functional organization of the mouse visual cortex.

Nature neuroscience

Avec: Saskia E J de Vries , Jerome A Lecoq , Michael A Buice , Peter A Groblewski , Gabriel K Ocker , Michael Oliver , David Feng , Nicholas Cain , Peter Ledochowitsch , Daniel Millman , Kate Roll , Marina Garrett , Tom Keenan , Leonard Kuan , Stefan Mihalas , Shawn Olsen , Carol Thompson , Wayne Wakeman , Jack Waters , Derric Williams , Chris Barber , Nathan Berbesque , Brandon Blanchard , Nicholas Bowles , Shiella D Caldejon , Linzy Casal , Andrew Cho , Sissy Cross , Chinh Dang , Tim Dolbeare , Melise Edwards , John Galbraith , Nathalie Gaudreault , Terri L Gilbert , Fiona Griffin , Perry Hargrave , Robert Howard , Lawrence Huang , Sean Jewell , Nika Keller , Ulf Knoblich , Josh D Larkin , Rachael Larsen , Chris Lau , Eric Lee , Felix Lee , Arielle Leon , Lu Li , Fuhui Long , Jennifer Luviano , Kyla Mace , Thuyanh Nguyen , Jed Perkins , Miranda Robertson , Sam Seid , Eric Shea-Brown , Jianghong Shi , Nathan Sjoquist , Cliff Slaughterbeck , David Sullivan , Ryan Valenza , Casey White , Ali Williford , Daniela M Witten , Jun Zhuang , Hongkui Zeng , Colin Farrell , Lydia Ng , Amy Bernard , John W Phillips , R Clay Reid , Christof Koch

Network structure mediates functional reorganization induced by optogenetic stimulation of non-human primate sensorimotor cortex.

iScience

Avec: Julien Bloch , Alexander Greaves-Tunnell , Eric Shea-Brown , Zaid Harchaoui , Ali Shojaie , Azadeh Yazdan-Shahmorad

From lazy to rich to exclusive task representations in neural networks and neural codes.

Current opinion in neurobiology

Avec: Matthew Farrell , Stefano Recanatesi , Eric Shea-Brown

HOW CONNECTIVITY STRUCTURE SHAPES RICH AND LAZY LEARNING IN NEURAL CIRCUITS.

ArXiv

Avec: Yuhan Helena Liu , Aristide Baratin , Jonathan Cornford , Stefan Mihalas , Eric Shea-Brown , Guillaume Lajoie

Dimensionality in recurrent spiking networks: Global trends in activity and local origins in connectivity.

PLoS computational biology

Avec: Stefano Recanatesi , Gabriel Koch Ocker , Michael A Buice , Eric Shea-Brown

Predictive learning as a network mechanism for extracting low-dimensional latent space representations.

Nature communications

Avec: Stefano Recanatesi , Matthew Farrell , Guillaume Lajoie , Sophie Deneve , Mattia Rigotti , Eric Shea-Brown

Single Circuit in V1 Capable of Switching Contexts During Movement Using an Inhibitory Population as a Switch.

Neural computation

Avec: Doris Voina , Stefano Recanatesi , Brian Hu , Eric Shea-Brown , Stefan Mihalas

Learning dynamics of deep linear networks with multiple pathways.

Advances in neural information processing systems

Avec: Jianghong Shi , Eric Shea-Brown , Michael A Buice

MouseNet: A biologically constrained convolutional neural network model for the mouse visual cortex.

PLoS computational biology

Avec: Jianghong Shi , Bryan Tripp , Eric Shea-Brown , Stefan Mihalas , Michael A Buice

A scale-dependent measure of system dimensionality.

Patterns (New York, N.Y.)

Avec: Stefano Recanatesi , Serena Bradde , Vijay Balasubramanian , Nicholas A Steinmetz , Eric Shea-Brown

A biologically inspired architecture with switching units can learn to generalize across backgrounds.

Neural networks : the official journal of the International Neural Network Society

Avec: Doris Voina , Eric Shea-Brown , Stefan Mihalas

Réseau de co-auteurs

Stefan Mihalas 10 collaborations

Stefano Recanatesi 6 collaborations

Yuhan Helena Liu 4 collaborations

Michael A Buice 4 collaborations

Matthew Farrell 3 collaborations

Jianghong Shi 3 collaborations

Dana Mastrovito 2 collaborations

Christof Koch 2 collaborations

R Clay Reid 2 collaborations

Hongkui Zeng 2 collaborations

Guillaume Lajoie 2 collaborations

Doris Voina 2 collaborations

Lukasz Kusmierz 1 collaboration

Joseph E Knox 1 collaboration

Kameron Decker Harris 1 collaboration

Nile Graddis 1 collaboration

Jennifer D Whitesell 1 collaboration

Julie A Harris 1 collaboration

Chloe N Winston 1 collaboration

James Hazelden 1 collaboration

Eli Shlizerman 1 collaboration

Stephen Smith 1 collaboration

Uygar Sümbül 1 collaboration

Alison I Weber 1 collaboration

Fred Rieke 1 collaboration

Shirui Chen 1 collaboration

Linxing Preston Jiang 1 collaboration

Rajesh P N Rao 1 collaboration

Merav Stern 1 collaboration

Saskia E J de Vries 1 collaboration

Jerome A Lecoq 1 collaboration

Peter A Groblewski 1 collaboration

Gabriel K Ocker 1 collaboration

Michael Oliver 1 collaboration

David Feng 1 collaboration

Nicholas Cain 1 collaboration

Peter Ledochowitsch 1 collaboration

Daniel Millman 1 collaboration

Kate Roll 1 collaboration

Marina Garrett 1 collaboration

Tom Keenan 1 collaboration

Leonard Kuan 1 collaboration

Shawn Olsen 1 collaboration

Carol Thompson 1 collaboration

Wayne Wakeman 1 collaboration

Jack Waters 1 collaboration

Derric Williams 1 collaboration

Chris Barber 1 collaboration

Nathan Berbesque 1 collaboration

Brandon Blanchard 1 collaboration

Nicholas Bowles 1 collaboration

Shiella D Caldejon 1 collaboration

Linzy Casal 1 collaboration

Andrew Cho 1 collaboration

Sissy Cross 1 collaboration

Chinh Dang 1 collaboration

Tim Dolbeare 1 collaboration

Melise Edwards 1 collaboration

John Galbraith 1 collaboration

Nathalie Gaudreault 1 collaboration

Terri L Gilbert 1 collaboration

Fiona Griffin 1 collaboration

Perry Hargrave 1 collaboration

Robert Howard 1 collaboration

Lawrence Huang 1 collaboration

Sean Jewell 1 collaboration

Nika Keller 1 collaboration

Ulf Knoblich 1 collaboration

Josh D Larkin 1 collaboration

Rachael Larsen 1 collaboration

Chris Lau 1 collaboration

Eric Lee 1 collaboration

Felix Lee 1 collaboration

Arielle Leon 1 collaboration

Lu Li 1 collaboration

Fuhui Long 1 collaboration

Jennifer Luviano 1 collaboration

Kyla Mace 1 collaboration

Thuyanh Nguyen 1 collaboration

Jed Perkins 1 collaboration

Miranda Robertson 1 collaboration

Sam Seid 1 collaboration

Nathan Sjoquist 1 collaboration

Cliff Slaughterbeck 1 collaboration

David Sullivan 1 collaboration

Ryan Valenza 1 collaboration

Casey White 1 collaboration

Ali Williford 1 collaboration

Daniela M Witten 1 collaboration

Jun Zhuang 1 collaboration

Colin Farrell 1 collaboration

Lydia Ng 1 collaboration

Amy Bernard 1 collaboration

John W Phillips 1 collaboration

Julien Bloch 1 collaboration

Alexander Greaves-Tunnell 1 collaboration

Zaid Harchaoui 1 collaboration

Ali Shojaie 1 collaboration

Azadeh Yazdan-Shahmorad 1 collaboration

Aristide Baratin 1 collaboration

Jonathan Cornford 1 collaboration

Gabriel Koch Ocker 1 collaboration

Sophie Deneve 1 collaboration

Mattia Rigotti 1 collaboration

Brian Hu 1 collaboration

Bryan Tripp 1 collaboration

Serena Bradde 1 collaboration

Vijay Balasubramanian 1 collaboration

Nicholas A Steinmetz 1 collaboration