F Massip

Affiliations

Berlin Institute for Medical Systems Biology, Max Delbrück Center for Molecular Medicine, Robert-Rössle-Str. 10, 13125 Berlin, Germany.

Publications (9)

A point cloud segmentation framework for image-based spatial transcriptomics.

Communications biology

Avec: Thomas Defard , Hugo Laporte , Mallick Ayan , Juliette Soulier , Sandra Curras-Alonso , Christian Weber , Florian Massip , José-Arturo Londoño-Vallejo , Charles Fouillade , Florian Mueller , Thomas Walter

Modeling the mosaic structure of bacterial genomes to infer their evolutionary history.

Proceedings of the National Academy of Sciences of the United States of America

Avec: Michael Sheinman , Peter F Arndt , Florian Massip

Determinants of SARS-CoV-2 receptor gene expression in upper and lower airways.

medRxiv : the preprint server for health sciences

Avec: H Aliee , F Massip , C Qi , M Stella de Biase , J van Nijnatten , E T G Kersten , N Z Kermani , B Khuder , J M Vonk , R C H Vermeulen , Auteur inconnu , Auteur inconnu , Auteur inconnu , Auteur inconnu , M Neighbors , G W Tew , M Grimbaldeston , N H T Ten Hacken , S Hu , Y Guo , X Zhang , K Sun , P S Hiemstra , B A Ponder , M J Mäkelä , K Malmström , R C Rintoul , P A Reyfman , F J Theis , C A Brandsma , I M Adcock , W Timens , C J Xu , M van den Berge , R F Schwarz , G H Koppelman , M C Nawijn , A Faiz

Locus specific epigenetic modalities of random allelic expression imbalance.

Nature communications

Avec: Lucile Marion-Poll , Benjamin Forêt , Dina Zielinski , Florian Massip , Mikael Attia , Ava C Carter , Laurène Syx , Howard Y Chang , Anne-Valerie Gendrel , Edith Heard

Evolution of replication origins in vertebrate genomes: rapid turnover despite selective constraints.

Nucleic acids research

Avec: Florian Massip , Marc Laurent , Caroline Brossas , José Miguel Fernández-Justel , María Gómez , Marie-Noelle Prioleau , Laurent Duret , Franck Picard

Dimeric G-quadruplex motifs-induced NFRs determine strong replication origins in vertebrates.

Nature communications

Avec: Jérémy Poulet-Benedetti , Caroline Tonnerre-Doncarli , Anne-Laure Valton , Marc Laurent , Marie Gérard , Natalja Barinova , Nikolaos Parisis , Florian Massip , Franck Picard , Marie-Noëlle Prioleau

Identical sequences found in distant genomes reveal frequent horizontal transfer across the bacterial domain.

eLife

Avec: Michael Sheinman , Ksenia Arkhipova , Peter F Arndt , Bas E Dutilh , Rutger Hermsen , Florian Massip

An interactive murine single-cell atlas of the lung responses to radiation injury.

Nature communications

Avec: Sandra Curras-Alonso , Juliette Soulier , Thomas Defard , Christian Weber , Sophie Heinrich , Hugo Laporte , Sophie Leboucher , Sonia Lameiras , Marie Dutreix , Vincent Favaudon , Florian Massip , Thomas Walter , Florian Mueller , José-Arturo Londoño-Vallejo , Charles Fouillade

Smoking-associated gene expression alterations in nasal epithelium reveal immune impairment linked to lung cancer risk.

Genome medicine

Avec: Maria Stella de Biase , Florian Massip , Tzu-Ting Wei , Federico M Giorgi , Rory Stark , Amanda Stone , Amy Gladwell , Martin O'Reilly , Daniel Schütte , Ines de Santiago , Kerstin B Meyer , Florian Markowetz , Bruce A J Ponder , Robert C Rintoul , Roland F Schwarz

Réseau de co-auteurs

Florian Massip 8 collaborations

None None 4 collaborations

Thomas Defard 2 collaborations

Hugo Laporte 2 collaborations

Juliette Soulier 2 collaborations

Sandra Curras-Alonso 2 collaborations

Christian Weber 2 collaborations

José-Arturo Londoño-Vallejo 2 collaborations

Charles Fouillade 2 collaborations

Florian Mueller 2 collaborations

Thomas Walter 2 collaborations

Michael Sheinman 2 collaborations

Peter F Arndt 2 collaborations

Marc Laurent 2 collaborations

Franck Picard 2 collaborations

Mallick Ayan 1 collaboration

H Aliee 1 collaboration

C Qi 1 collaboration

M Stella de Biase 1 collaboration

J van Nijnatten 1 collaboration

E T G Kersten 1 collaboration

N Z Kermani 1 collaboration

B Khuder 1 collaboration

J M Vonk 1 collaboration

R C H Vermeulen 1 collaboration

M Neighbors 1 collaboration

G W Tew 1 collaboration

M Grimbaldeston 1 collaboration

N H T Ten Hacken 1 collaboration

S Hu 1 collaboration

Y Guo 1 collaboration

X Zhang 1 collaboration

K Sun 1 collaboration

P S Hiemstra 1 collaboration

B A Ponder 1 collaboration

M J Mäkelä 1 collaboration

K Malmström 1 collaboration

R C Rintoul 1 collaboration

P A Reyfman 1 collaboration

F J Theis 1 collaboration

C A Brandsma 1 collaboration

I M Adcock 1 collaboration

W Timens 1 collaboration

C J Xu 1 collaboration

M van den Berge 1 collaboration

R F Schwarz 1 collaboration

G H Koppelman 1 collaboration

M C Nawijn 1 collaboration

A Faiz 1 collaboration

Lucile Marion-Poll 1 collaboration

Benjamin Forêt 1 collaboration

Dina Zielinski 1 collaboration

Mikael Attia 1 collaboration

Ava C Carter 1 collaboration

Laurène Syx 1 collaboration

Howard Y Chang 1 collaboration

Anne-Valerie Gendrel 1 collaboration

Edith Heard 1 collaboration

Caroline Brossas 1 collaboration

José Miguel Fernández-Justel 1 collaboration

María Gómez 1 collaboration

Marie-Noelle Prioleau 1 collaboration

Laurent Duret 1 collaboration

Jérémy Poulet-Benedetti 1 collaboration

Caroline Tonnerre-Doncarli 1 collaboration

Anne-Laure Valton 1 collaboration

Marie Gérard 1 collaboration

Natalja Barinova 1 collaboration

Nikolaos Parisis 1 collaboration

Marie-Noëlle Prioleau 1 collaboration

Ksenia Arkhipova 1 collaboration

Bas E Dutilh 1 collaboration

Rutger Hermsen 1 collaboration

Sophie Heinrich 1 collaboration

Sophie Leboucher 1 collaboration

Sonia Lameiras 1 collaboration

Marie Dutreix 1 collaboration

Vincent Favaudon 1 collaboration

Maria Stella de Biase 1 collaboration

Tzu-Ting Wei 1 collaboration

Federico M Giorgi 1 collaboration

Rory Stark 1 collaboration

Amanda Stone 1 collaboration

Amy Gladwell 1 collaboration

Martin O'Reilly 1 collaboration

Daniel Schütte 1 collaboration

Ines de Santiago 1 collaboration

Kerstin B Meyer 1 collaboration

Florian Markowetz 1 collaboration

Bruce A J Ponder 1 collaboration

Robert C Rintoul 1 collaboration

Roland F Schwarz 1 collaboration