Falk Butter

Affiliations

Institute of Molecular Biology (IMB), Mainz, Germany.

ORCID: 0000-0002-7197-7279

Publications (19)

Cell-based and multi-omics profiling reveals dynamic metabolic repurposing of mitochondria to drive developmental progression of Trypanosoma brucei.

PLoS biology

Avec: Eva Doleželová , Michaela Kunzová , Mario Dejung , Michal Levin , Brian Panicucci , Clément Regnault , Christian J Janzen , Michael P Barrett , Falk Butter , Alena Zíková

The RNA fold interactome of evolutionary conserved RNA structures in S. cerevisiae.

Nature communications

Avec: Nuria Casas-Vila , Sergi Sayols , Lara Pérez-Martínez , Marion Scheibe , Falk Butter

Trypanosomes can initiate nuclear export co-transcriptionally.

Nucleic acids research

Avec: Carina Goos , Mario Dejung , Ann M Wehman , Elisabeth M-Natus , Johannes Schmidt , Jack Sunter , Markus Engstler , Falk Butter , Susanne Kramer

Transcriptional activity and epigenetic regulation of transposable elements in the symbiotic fungus

Genome research

Avec: Alexandra Dallaire , Bethan F Manley , Maya Wilkens , Iliana Bista , Clement Quan , Edouard Evangelisti , Charles R Bradshaw , Navin B Ramakrishna , Sebastian Schornack , Falk Butter , Uta Paszkowski , Eric A Miska

Ythdf is a N6-methyladenosine reader that modulates Fmr1 target mRNA selection and restricts axonal growth in Drosophila.

The EMBO journal

Avec: Lina Worpenberg , Chiara Paolantoni , Sara Longhi , Miriam M Mulorz , Tina Lence , Hans-Hermann Wessels , Erik Dassi , Giuseppe Aiello , F X Reymond Sutandy , Marion Scheibe , Raghu R Edupuganti , Anke Busch , Martin M Möckel , Michiel Vermeulen , Falk Butter , Julian König , Michela Notarangelo , Uwe Ohler , Christoph Dieterich , Alessandro Quattrone , Alessia Soldano , Jean-Yves Roignant

The double-stranded DNA-binding proteins TEBP-1 and TEBP-2 form a telomeric complex with POT-1.

Nature communications

Avec: Sabrina Dietz , Miguel Vasconcelos Almeida , Emily Nischwitz , Jan Schreier , Nikenza Viceconte , Albert Fradera-Sola , Christian Renz , Alejandro Ceron-Noriega , Helle D Ulrich , Dennis Kappei , René F Ketting , Falk Butter

Identification of the transcription factor MAZ as a regulator of erythropoiesis.

Blood advances

Avec: Darya Deen , Falk Butter , Deborah E Daniels , Ivan Ferrer-Vicens , Daniel C J Ferguson , Michelle L Holland , Vasiliki Samara , Jacqueline A Sloane-Stanley , Helena Ayyub , Matthias Mann , Jan Frayne , David Garrick , Douglas Vernimmen

A novel SNF2 ATPase complex in Trypanosoma brucei with a role in H2A.Z-mediated chromatin remodelling.

PLoS pathogens

Avec: Tim Vellmer , Laura Hartleb , Albert Fradera Sola , Susanne Kramer , Elisabeth Meyer-Natus , Falk Butter , Christian J Janzen

Long live the host! Proteomic analysis reveals possible strategies for parasitic manipulation of its social host.

Molecular ecology

Avec: Juliane Hartke , Alejandro Ceron-Noriega , Marah Stoldt , Tom Sistermans , Marion Kever , Jenny Fuchs , Falk Butter , Susanne Foitzik

AlexandrusPS: A User-Friendly Pipeline for the Automated Detection of Orthologous Gene Clusters and Subsequent Positive Selection Analysis.

Genome biology and evolution

Avec: Alejandro Ceron-Noriega , Vivien A C Schoonenberg , Falk Butter , Michal Levin

Proteome effects of genome-wide single gene perturbations.

Nature communications

Avec: Merve Öztürk , Anja Freiwald , Jasmin Cartano , Ramona Schmitt , Mario Dejung , Katja Luck , Bassem Al-Sady , Sigurd Braun , Michal Levin , Falk Butter

RNA-DNA hybrids prevent resection at dysfunctional telomeres.

Cell reports

Avec: Vanessa Borges Pires , Nina Lohner , Tina Wagner , Carolin B Wagner , Maya Wilkens , Mona Hajikazemi , Katrin Paeschke , Falk Butter , Brian Luke

The protein phosphatase-2A subunit PR130 is involved in the formation of cytotoxic protein aggregates in pancreatic ductal adenocarcinoma cells.

Cell communication and signaling : CCS

Avec: Alexandra Nguyen , Al-Hassan M Mustafa , Alessa K Leydecker , Melisa Halilovic , Janine Murr , Falk Butter , Oliver H Krämer

PU.1 controls fibroblast polarization and tissue fibrosis.

Nature

Avec: Thomas Wohlfahrt , Simon Rauber , Steffen Uebe , Markus Luber , Alina Soare , Arif Ekici , Stefanie Weber , Alexandru-Emil Matei , Chih-Wei Chen , Christiane Maier , Emmanuel Karouzakis , Hans P Kiener , Elena Pachera , Clara Dees , Christian Beyer , Christoph Daniel , Kolja Gelse , Andreas E Kremer , Elisabeth Naschberger , Michael Stürzl , Falk Butter , Michael Sticherling , Susetta Finotto , Alexander Kreuter , Mark H Kaplan , Astrid Jüngel , Steffen Gay , Stephen L Nutt , David W Boykin , Gregory M K Poon , Oliver Distler , Georg Schett , Jörg H W Distler , Andreas Ramming

ZBTB10 binds the telomeric variant repeat TTGGGG and interacts with TRF2.

Nucleic acids research

Avec: Alina Bluhm , Nikenza Viceconte , Fudong Li , Grishma Rane , Sandra Ritz , Suman Wang , Michal Levin , Yunyu Shi , Dennis Kappei , Falk Butter

Human platelet lysate as validated replacement for animal serum to assess chemosensitivity.

ALTEX

Avec: Miriam Pons , Georg Nagel , Yanira Zeyn , Mandy Beyer , Teresa Laguna , Tina Brachetti , Andreas Sellmer , Siavosh Mahboobi , Roland Conradi , Falk Butter , Oliver H Krämer

TbSAP is a novel chromatin protein repressing metacyclic variant surface glycoprotein expression sites in bloodstream form Trypanosoma brucei.

Nucleic acids research

Avec: Carys Davies , Cher-Pheng Ooi , Georgios Sioutas , Belinda S Hall , Haneesh Sidhu , Falk Butter , Sam Alsford , Bill Wickstead , Gloria Rudenko

PAR-TERRA is the main contributor to telomeric repeat-containing RNA transcripts in normal and cancer mouse cells.

RNA (New York, N.Y.)

Avec: Nikenza Viceconte , Axelle Loriot , Patrícia Lona Abreu , Marion Scheibe , Albert Fradera Sola , Falk Butter , Charles De Smet , Claus M Azzalin , Nausica Arnoult , Anabelle Decottignies

Identification of antiparasitic drug targets using a multi-omics workflow in the acanthocephalan model.

BMC genomics

Avec: Hanno Schmidt , Katharina Mauer , Manuel Glaser , Bahram Sayyaf Dezfuli , Sören Lukas Hellmann , Ana Lúcia Silva Gomes , Falk Butter , Rebecca C Wade , Thomas Hankeln , Holger Herlyn

Réseau de co-auteurs

Michal Levin 4 collaborations

Mario Dejung 3 collaborations

Marion Scheibe 3 collaborations

Nikenza Viceconte 3 collaborations

Alejandro Ceron-Noriega 3 collaborations

Christian J Janzen 2 collaborations

Susanne Kramer 2 collaborations

Maya Wilkens 2 collaborations

Dennis Kappei 2 collaborations

Albert Fradera Sola 2 collaborations

Oliver H Krämer 2 collaborations

Eva Doleželová 1 collaboration

Michaela Kunzová 1 collaboration

Brian Panicucci 1 collaboration

Clément Regnault 1 collaboration

Michael P Barrett 1 collaboration

Alena Zíková 1 collaboration

Nuria Casas-Vila 1 collaboration

Sergi Sayols 1 collaboration

Lara Pérez-Martínez 1 collaboration

Carina Goos 1 collaboration

Ann M Wehman 1 collaboration

Elisabeth M-Natus 1 collaboration

Johannes Schmidt 1 collaboration

Jack Sunter 1 collaboration

Markus Engstler 1 collaboration

Alexandra Dallaire 1 collaboration

Bethan F Manley 1 collaboration

Iliana Bista 1 collaboration

Clement Quan 1 collaboration

Edouard Evangelisti 1 collaboration

Charles R Bradshaw 1 collaboration

Navin B Ramakrishna 1 collaboration

Sebastian Schornack 1 collaboration

Uta Paszkowski 1 collaboration

Eric A Miska 1 collaboration

Lina Worpenberg 1 collaboration

Chiara Paolantoni 1 collaboration

Sara Longhi 1 collaboration

Miriam M Mulorz 1 collaboration

Tina Lence 1 collaboration

Hans-Hermann Wessels 1 collaboration

Erik Dassi 1 collaboration

Giuseppe Aiello 1 collaboration

F X Reymond Sutandy 1 collaboration

Raghu R Edupuganti 1 collaboration

Anke Busch 1 collaboration

Martin M Möckel 1 collaboration

Michiel Vermeulen 1 collaboration

Julian König 1 collaboration

Michela Notarangelo 1 collaboration

Uwe Ohler 1 collaboration

Christoph Dieterich 1 collaboration

Alessandro Quattrone 1 collaboration

Alessia Soldano 1 collaboration

Jean-Yves Roignant 1 collaboration

Sabrina Dietz 1 collaboration

Miguel Vasconcelos Almeida 1 collaboration

Emily Nischwitz 1 collaboration

Jan Schreier 1 collaboration

Albert Fradera-Sola 1 collaboration

Christian Renz 1 collaboration

Helle D Ulrich 1 collaboration

René F Ketting 1 collaboration

Darya Deen 1 collaboration

Deborah E Daniels 1 collaboration

Ivan Ferrer-Vicens 1 collaboration

Daniel C J Ferguson 1 collaboration

Michelle L Holland 1 collaboration

Vasiliki Samara 1 collaboration

Jacqueline A Sloane-Stanley 1 collaboration

Helena Ayyub 1 collaboration

Matthias Mann 1 collaboration

Jan Frayne 1 collaboration

David Garrick 1 collaboration

Douglas Vernimmen 1 collaboration

Tim Vellmer 1 collaboration

Laura Hartleb 1 collaboration

Elisabeth Meyer-Natus 1 collaboration

Juliane Hartke 1 collaboration

Marah Stoldt 1 collaboration

Tom Sistermans 1 collaboration

Marion Kever 1 collaboration

Jenny Fuchs 1 collaboration

Susanne Foitzik 1 collaboration

Vivien A C Schoonenberg 1 collaboration

Merve Öztürk 1 collaboration

Anja Freiwald 1 collaboration

Jasmin Cartano 1 collaboration

Ramona Schmitt 1 collaboration

Katja Luck 1 collaboration

Bassem Al-Sady 1 collaboration

Sigurd Braun 1 collaboration

Vanessa Borges Pires 1 collaboration

Nina Lohner 1 collaboration

Tina Wagner 1 collaboration

Carolin B Wagner 1 collaboration

Mona Hajikazemi 1 collaboration

Katrin Paeschke 1 collaboration

Brian Luke 1 collaboration

Alexandra Nguyen 1 collaboration

Al-Hassan M Mustafa 1 collaboration

Alessa K Leydecker 1 collaboration

Melisa Halilovic 1 collaboration

Janine Murr 1 collaboration

Thomas Wohlfahrt 1 collaboration

Simon Rauber 1 collaboration

Steffen Uebe 1 collaboration

Markus Luber 1 collaboration

Alina Soare 1 collaboration

Arif Ekici 1 collaboration

Stefanie Weber 1 collaboration

Alexandru-Emil Matei 1 collaboration

Chih-Wei Chen 1 collaboration

Christiane Maier 1 collaboration

Emmanuel Karouzakis 1 collaboration

Hans P Kiener 1 collaboration

Elena Pachera 1 collaboration

Clara Dees 1 collaboration

Christian Beyer 1 collaboration

Christoph Daniel 1 collaboration

Kolja Gelse 1 collaboration

Andreas E Kremer 1 collaboration

Elisabeth Naschberger 1 collaboration

Michael Stürzl 1 collaboration

Michael Sticherling 1 collaboration

Susetta Finotto 1 collaboration

Alexander Kreuter 1 collaboration

Mark H Kaplan 1 collaboration

Astrid Jüngel 1 collaboration

Steffen Gay 1 collaboration

Stephen L Nutt 1 collaboration

David W Boykin 1 collaboration

Gregory M K Poon 1 collaboration

Oliver Distler 1 collaboration

Georg Schett 1 collaboration

Jörg H W Distler 1 collaboration

Andreas Ramming 1 collaboration

Alina Bluhm 1 collaboration

Fudong Li 1 collaboration

Grishma Rane 1 collaboration

Sandra Ritz 1 collaboration

Suman Wang 1 collaboration

Yunyu Shi 1 collaboration

Miriam Pons 1 collaboration

Georg Nagel 1 collaboration

Yanira Zeyn 1 collaboration

Mandy Beyer 1 collaboration

Teresa Laguna 1 collaboration

Tina Brachetti 1 collaboration

Andreas Sellmer 1 collaboration

Siavosh Mahboobi 1 collaboration

Roland Conradi 1 collaboration

Carys Davies 1 collaboration

Cher-Pheng Ooi 1 collaboration

Georgios Sioutas 1 collaboration

Belinda S Hall 1 collaboration

Haneesh Sidhu 1 collaboration

Sam Alsford 1 collaboration

Bill Wickstead 1 collaboration

Gloria Rudenko 1 collaboration

Axelle Loriot 1 collaboration

Patrícia Lona Abreu 1 collaboration

Charles De Smet 1 collaboration

Claus M Azzalin 1 collaboration

Nausica Arnoult 1 collaboration

Anabelle Decottignies 1 collaboration

Hanno Schmidt 1 collaboration

Katharina Mauer 1 collaboration

Manuel Glaser 1 collaboration

Bahram Sayyaf Dezfuli 1 collaboration

Sören Lukas Hellmann 1 collaboration

Ana Lúcia Silva Gomes 1 collaboration

Rebecca C Wade 1 collaboration

Thomas Hankeln 1 collaboration

Holger Herlyn 1 collaboration