Ian Setliff

Affiliations

Vanderbilt Vaccine Center, Vanderbilt University Medical Center, Nashville, TN, USA.
Program in Chemical & Physical Biology, Vanderbilt University Medical Center, Nashville, TN, USA.

Publications (15)

NFPws: a web server for delineating broadly neutralizing antibody specificities from serum HIV-1 neutralization data.

Bioinformatics (Oxford, England)

Avec: Nagarajan Raju , Ian Setliff , Ivelin S Georgiev

High-Throughput B Cell Epitope Determination by Next-Generation Sequencing.

Frontiers in immunology

Avec: Lauren M Walker , Andrea R Shiakolas , Rohit Venkat , Zhaojing Ariel Liu , Steven Wall , Nagarajan Raju , Kelsey A Pilewski , Ian Setliff , Amyn A Murji , Rebecca Gillespie , Nigel A Makoah , Masaru Kanekiyo , Mark Connors , Lynn Morris , Ivelin S Georgiev

Digital wearable insole-based identification of knee arthropathies and gait signatures using machine learning.

eLife

Avec: Matthew F Wipperman , Allen Z Lin , Kaitlyn M Gayvert , Benjamin Lahner , Selin Somersan-Karakaya , Xuefang Wu , Joseph Im , Minji Lee , Bharatkumar Koyani , Ian Setliff , Malika Thakur , Daoyu Duan , Aurora Breazna , Fang Wang , Wei Keat Lim , Gabor Halasz , Jacek Urbanek , Yamini Patel , Gurinder S Atwal , Jennifer D Hamilton , Samuel Stuart , Oren Levy , Andreja Avbersek , Rinol Alaj , Sara C Hamon , Olivier Harari

Human antibodies neutralize enterovirus D68 and protect against infection and paralytic disease.

Science immunology

Avec: Matthew R Vogt , Jianing Fu , Nurgun Kose , Lauren E Williamson , Robin Bombardi , Ian Setliff , Ivelin S Georgiev , Thomas Klose , Michael G Rossmann , Yury A Bochkov , James E Gern , Richard J Kuhn , James E Crowe

Isolation and characterization of IgG3 glycan-targeting antibodies with exceptional cross-reactivity for diverse viral families.

PLoS pathogens

Avec: Matthew J Vukovich , Andrea R Shiakolas , Jared Lindenberger , Robert A Richardson , Lindsay E Bass , Maggie Barr , Yanshun Liu , Eden P Go , Chan Soo Park , Aaron J May , Salam Sammour , Chipo Kambarami , Xiao Huang , Katarzyna Janowska , Robert J Edwards , Katayoun Mansouri , Taylor N Spence , Alexandra A Abu-Shmais , Nelia P Manamela , Simone I Richardson , Sabina E W Leonard , Kathryn R Gripenstraw , Ian Setliff , Kevin O Saunders , Rachel H Bonami , Ted M Ross , Heather Desaire , Penny L Moore , Robert Parks , Barton F Haynes , Daniel J Sheward , Priyamvada Acharya , Giuseppe A Sautto , Ivelin S Georgiev

Efficient discovery of potently neutralizing SARS-CoV-2 antibodies using LIBRA-seq with ligand blocking.

bioRxiv : the preprint server for biology

Avec: Andrea R Shiakolas , Nicole Johnson , Kevin J Kramer , Naveenchandra Suryadevara , Daniel Wrapp , Sivakumar Periasamy , Kelsey A Pilewski , Nagarajan Raju , Rachel Nargi , Rachel E Sutton , Lauren Walker , Ian Setliff , James E Crowe , Alexander Bukreyev , Robert H Carnahan , Jason S McLellan , Ivelin S Georgiev

Sequence and functional characterization of a public HIV-specific antibody clonotype.

iScience

Avec: Amyn A Murji , Nagarajan Raju , Juliana S Qin , Haajira Kaldine , Katarzyna Janowska , Emilee Friedman Fechter , Rutendo Mapengo , Cathrine Scheepers , Ian Setliff , Priyamvada Acharya , Lynn Morris , Ivelin S Georgiev

High-Throughput Mapping of B Cell Receptor Sequences to Antigen Specificity.

Cell

Avec: Ian Setliff , Andrea R Shiakolas , Kelsey A Pilewski , Amyn A Murji , Rutendo E Mapengo , Katarzyna Janowska , Simone Richardson , Charissa Oosthuysen , Nagarajan Raju , Larance Ronsard , Masaru Kanekiyo , Juliana S Qin , Kevin J Kramer , Allison R Greenplate , Wyatt J McDonnell , Barney S Graham , Mark Connors , Daniel Lingwood , Priyamvada Acharya , Lynn Morris , Ivelin S Georgiev

Potent Zika and dengue cross-neutralizing antibodies induced by Zika vaccination in a dengue-experienced donor.

Nature medicine

Avec: Vincent Dussupt , Rajeshwer S Sankhala , Gregory D Gromowski , Gina Donofrio , Rafael A De La Barrera , Rafael A Larocca , Weam Zaky , Letzibeth Mendez-Rivera , Misook Choe , Edgar Davidson , Michael K McCracken , James D Brien , Peter Abbink , Hongjun Bai , Aubrey L Bryan , Candace Hope Bias , Irina Maljkovic Berry , Nubia Botero , Tanya Cook , Nicole A Doria-Rose , Ariadna Grinyo I Escuer , Justice Akuoku Frimpong , Aviva Geretz , Mayda Hernandez , Bradley S Hollidge , Ningbo Jian , Kareem Kabra , David J Leggat , Jinyan Liu , Amelia K Pinto , Wiriya Rutvisuttinunt , Ian Setliff , Ursula Tran , Samantha Townsley , Benjamin J Doranz , Morgane Rolland , Adrian B McDermott , Ivelin S Georgiev , Rasmi Thomas , Merlin L Robb , Kenneth H Eckels , Elizabeth Barranco , Michael Koren , Darci R Smith , Richard G Jarman , Sarah L George , Kathryn E Stephenson , Dan H Barouch , Kayvon Modjarrad , Nelson L Michael , M Gordon Joyce , Shelly J Krebs

Functional HIV-1/HCV cross-reactive antibodies isolated from a chronically co-infected donor.

Cell reports

Avec: Kelsey A Pilewski , Steven Wall , Simone I Richardson , Nelia P Manamela , Kaitlyn Clark , Tandile Hermanus , Elad Binshtein , Rohit Venkat , Giuseppe A Sautto , Kevin J Kramer , Andrea R Shiakolas , Ian Setliff , Jordan Salas , Rutendo E Mapengo , Naveen Suryadevara , John R Brannon , Connor J Beebout , Rob Parks , Nagarajan Raju , Nicole Frumento , Lauren M Walker , Emilee Friedman Fechter , Juliana S Qin , Amyn A Murji , Katarzyna Janowska , Bhishem Thakur , Jared Lindenberger , Aaron J May , Xiao Huang , Salam Sammour , Priyamvada Acharya , Robert H Carnahan , Ted M Ross , Barton F Haynes , Maria Hadjifrangiskou , James E Crowe , Justin R Bailey , Spyros Kalams , Lynn Morris , Ivelin S Georgiev

Spontaneous Glycan Reattachment Following N-Glycanase Treatment of Influenza and HIV Vaccine Antigens.

Journal of proteome research

Avec: Celina L Keating , Eric Kuhn , Julia Bals , Alexandra R Cocco , Ashraf S Yousif , Colette Matysiak , Maya Sangesland , Larance Ronsard , Matthew Smoot , Thalia Bracamonte Moreno , Vintus Okonkwo , Ian Setliff , Ivelin Georgiev , Alejandro B Balazs , Steven A Carr , Daniel Lingwood

Prediction of VRC01 neutralization sensitivity by HIV-1 gp160 sequence features.

PLoS computational biology

Avec: Craig A Magaret , David C Benkeser , Brian D Williamson , Bhavesh R Borate , Lindsay N Carpp , Ivelin S Georgiev , Ian Setliff , Adam S Dingens , Noah Simon , Marco Carone , Christopher Simpkins , David Montefiori , Galit Alter , Wen-Han Yu , Michal Juraska , Paul T Edlefsen , Shelly Karuna , Nyaradzo M Mgodi , Srilatha Edugupanti , Peter B Gilbert

Efficient discovery of SARS-CoV-2-neutralizing antibodies via B cell receptor sequencing and ligand blocking.

Nature biotechnology

Avec: Andrea R Shiakolas , Kevin J Kramer , Nicole V Johnson , Steven C Wall , Naveenchandra Suryadevara , Daniel Wrapp , Sivakumar Periasamy , Kelsey A Pilewski , Nagarajan Raju , Rachel Nargi , Rachel E Sutton , Lauren M Walker , Ian Setliff , James E Crowe , Alexander Bukreyev , Robert H Carnahan , Jason S McLellan , Ivelin S Georgiev

TRAPnSeq allows high-throughput profiling of antigen-specific antibody-secreting cells.

Cell reports methods

Avec: Seblewongel Asrat , Joseph C Devlin , Andrea Vecchione , Brian Klotz , Ian Setliff , Devin Srivastava , Andre Limnander , Ashique Rafique , Christina Adler , Stephen Porter , Andrew J Murphy , Gurinder S Atwal , Matthew A Sleeman , Wei Keat Lim , Jamie M Orengo

Differential modulation of allergic rhinitis nasal transcriptome by dupilumab and allergy immunotherapy.

Allergy

Avec: Matthew F Wipperman , Kaitlyn M Gayvert , Amanda Atanasio , Claire Q Wang , Jonathan Corren , Angelica Covarrubias , Ian Setliff , Erica Chio , Elizabeth Laws , Kelley Wolfe , Sivan Harel , Jennifer Maloney , Gary Herman , Jamie M Orengo , Wei Keat Lim , Sara C Hamon , Jennifer D Hamilton , Meagan P O'Brien

Réseau de co-auteurs

Ivelin S Georgiev 11 collaborations

Nagarajan Raju 7 collaborations

Andrea R Shiakolas 6 collaborations

Kelsey A Pilewski 5 collaborations

Amyn A Murji 4 collaborations

Lynn Morris 4 collaborations

James E Crowe 4 collaborations

Katarzyna Janowska 4 collaborations

Priyamvada Acharya 4 collaborations

Kevin J Kramer 4 collaborations

Lauren M Walker 3 collaborations

Wei Keat Lim 3 collaborations

Robert H Carnahan 3 collaborations

Juliana S Qin 3 collaborations

Rohit Venkat 2 collaborations

Steven Wall 2 collaborations

Masaru Kanekiyo 2 collaborations

Mark Connors 2 collaborations

Matthew F Wipperman 2 collaborations

Kaitlyn M Gayvert 2 collaborations

Gurinder S Atwal 2 collaborations

Jennifer D Hamilton 2 collaborations

Sara C Hamon 2 collaborations

Jared Lindenberger 2 collaborations

Aaron J May 2 collaborations

Salam Sammour 2 collaborations

Xiao Huang 2 collaborations

Nelia P Manamela 2 collaborations

Simone I Richardson 2 collaborations

Ted M Ross 2 collaborations

Barton F Haynes 2 collaborations

Giuseppe A Sautto 2 collaborations

Naveenchandra Suryadevara 2 collaborations

Daniel Wrapp 2 collaborations

Sivakumar Periasamy 2 collaborations

Rachel Nargi 2 collaborations

Rachel E Sutton 2 collaborations

Alexander Bukreyev 2 collaborations

Jason S McLellan 2 collaborations

Emilee Friedman Fechter 2 collaborations

Rutendo E Mapengo 2 collaborations

Larance Ronsard 2 collaborations

Daniel Lingwood 2 collaborations

Jamie M Orengo 2 collaborations

Zhaojing Ariel Liu 1 collaboration

Rebecca Gillespie 1 collaboration

Nigel A Makoah 1 collaboration

Allen Z Lin 1 collaboration

Benjamin Lahner 1 collaboration

Selin Somersan-Karakaya 1 collaboration

Xuefang Wu 1 collaboration

Joseph Im 1 collaboration

Minji Lee 1 collaboration

Bharatkumar Koyani 1 collaboration

Malika Thakur 1 collaboration

Daoyu Duan 1 collaboration

Aurora Breazna 1 collaboration

Fang Wang 1 collaboration

Gabor Halasz 1 collaboration

Jacek Urbanek 1 collaboration

Yamini Patel 1 collaboration

Samuel Stuart 1 collaboration

Oren Levy 1 collaboration

Andreja Avbersek 1 collaboration

Rinol Alaj 1 collaboration

Olivier Harari 1 collaboration

Matthew R Vogt 1 collaboration

Jianing Fu 1 collaboration

Nurgun Kose 1 collaboration

Lauren E Williamson 1 collaboration

Robin Bombardi 1 collaboration

Thomas Klose 1 collaboration

Michael G Rossmann 1 collaboration

Yury A Bochkov 1 collaboration

James E Gern 1 collaboration

Richard J Kuhn 1 collaboration

Matthew J Vukovich 1 collaboration

Robert A Richardson 1 collaboration

Lindsay E Bass 1 collaboration

Maggie Barr 1 collaboration

Yanshun Liu 1 collaboration

Eden P Go 1 collaboration

Chan Soo Park 1 collaboration

Chipo Kambarami 1 collaboration

Robert J Edwards 1 collaboration

Katayoun Mansouri 1 collaboration

Taylor N Spence 1 collaboration

Alexandra A Abu-Shmais 1 collaboration

Sabina E W Leonard 1 collaboration

Kathryn R Gripenstraw 1 collaboration

Kevin O Saunders 1 collaboration

Rachel H Bonami 1 collaboration

Heather Desaire 1 collaboration

Penny L Moore 1 collaboration

Robert Parks 1 collaboration

Daniel J Sheward 1 collaboration

Nicole Johnson 1 collaboration

Lauren Walker 1 collaboration

Haajira Kaldine 1 collaboration

Rutendo Mapengo 1 collaboration

Cathrine Scheepers 1 collaboration

Simone Richardson 1 collaboration

Charissa Oosthuysen 1 collaboration

Allison R Greenplate 1 collaboration

Wyatt J McDonnell 1 collaboration

Barney S Graham 1 collaboration

Vincent Dussupt 1 collaboration

Rajeshwer S Sankhala 1 collaboration

Gregory D Gromowski 1 collaboration

Gina Donofrio 1 collaboration

Rafael A De La Barrera 1 collaboration

Rafael A Larocca 1 collaboration

Weam Zaky 1 collaboration

Letzibeth Mendez-Rivera 1 collaboration

Misook Choe 1 collaboration

Edgar Davidson 1 collaboration

Michael K McCracken 1 collaboration

James D Brien 1 collaboration

Peter Abbink 1 collaboration

Hongjun Bai 1 collaboration

Aubrey L Bryan 1 collaboration

Candace Hope Bias 1 collaboration

Irina Maljkovic Berry 1 collaboration

Nubia Botero 1 collaboration

Tanya Cook 1 collaboration

Nicole A Doria-Rose 1 collaboration

Ariadna Grinyo I Escuer 1 collaboration

Justice Akuoku Frimpong 1 collaboration

Aviva Geretz 1 collaboration

Mayda Hernandez 1 collaboration

Bradley S Hollidge 1 collaboration

Ningbo Jian 1 collaboration

Kareem Kabra 1 collaboration

David J Leggat 1 collaboration

Jinyan Liu 1 collaboration

Amelia K Pinto 1 collaboration

Wiriya Rutvisuttinunt 1 collaboration

Ursula Tran 1 collaboration

Samantha Townsley 1 collaboration

Benjamin J Doranz 1 collaboration

Morgane Rolland 1 collaboration

Adrian B McDermott 1 collaboration

Rasmi Thomas 1 collaboration

Merlin L Robb 1 collaboration

Kenneth H Eckels 1 collaboration

Elizabeth Barranco 1 collaboration

Michael Koren 1 collaboration

Darci R Smith 1 collaboration

Richard G Jarman 1 collaboration

Sarah L George 1 collaboration

Kathryn E Stephenson 1 collaboration

Dan H Barouch 1 collaboration

Kayvon Modjarrad 1 collaboration

Nelson L Michael 1 collaboration

M Gordon Joyce 1 collaboration

Shelly J Krebs 1 collaboration

Kaitlyn Clark 1 collaboration

Tandile Hermanus 1 collaboration

Elad Binshtein 1 collaboration

Jordan Salas 1 collaboration

Naveen Suryadevara 1 collaboration

John R Brannon 1 collaboration

Connor J Beebout 1 collaboration

Rob Parks 1 collaboration

Nicole Frumento 1 collaboration

Bhishem Thakur 1 collaboration

Maria Hadjifrangiskou 1 collaboration

Justin R Bailey 1 collaboration

Spyros Kalams 1 collaboration

Celina L Keating 1 collaboration

Eric Kuhn 1 collaboration

Julia Bals 1 collaboration

Alexandra R Cocco 1 collaboration

Ashraf S Yousif 1 collaboration

Colette Matysiak 1 collaboration

Maya Sangesland 1 collaboration

Matthew Smoot 1 collaboration

Thalia Bracamonte Moreno 1 collaboration

Vintus Okonkwo 1 collaboration

Ivelin Georgiev 1 collaboration

Alejandro B Balazs 1 collaboration

Steven A Carr 1 collaboration

Craig A Magaret 1 collaboration

David C Benkeser 1 collaboration

Brian D Williamson 1 collaboration

Bhavesh R Borate 1 collaboration

Lindsay N Carpp 1 collaboration

Adam S Dingens 1 collaboration

Noah Simon 1 collaboration

Marco Carone 1 collaboration

Christopher Simpkins 1 collaboration

David Montefiori 1 collaboration

Galit Alter 1 collaboration

Wen-Han Yu 1 collaboration

Michal Juraska 1 collaboration

Paul T Edlefsen 1 collaboration

Shelly Karuna 1 collaboration

Nyaradzo M Mgodi 1 collaboration

Srilatha Edugupanti 1 collaboration

Peter B Gilbert 1 collaboration

Nicole V Johnson 1 collaboration

Steven C Wall 1 collaboration

Seblewongel Asrat 1 collaboration

Joseph C Devlin 1 collaboration

Andrea Vecchione 1 collaboration

Brian Klotz 1 collaboration

Devin Srivastava 1 collaboration

Andre Limnander 1 collaboration

Ashique Rafique 1 collaboration

Christina Adler 1 collaboration

Stephen Porter 1 collaboration

Andrew J Murphy 1 collaboration

Matthew A Sleeman 1 collaboration

Amanda Atanasio 1 collaboration

Claire Q Wang 1 collaboration

Jonathan Corren 1 collaboration

Angelica Covarrubias 1 collaboration

Erica Chio 1 collaboration

Elizabeth Laws 1 collaboration

Kelley Wolfe 1 collaboration

Sivan Harel 1 collaboration

Jennifer Maloney 1 collaboration

Gary Herman 1 collaboration

Meagan P O'Brien 1 collaboration