Luis Chiriboga

Affiliations

From the Department of Pathology.

Publications (23)

Somatic Focal Copy Number Gains of Noncoding Regions of Receptor Tyrosine Kinase Genes in Treatment-Resistant Epilepsy.

Journal of neuropathology and experimental neurology

Avec: Varshini Vasudevaraja , Javier Hernaez Rodriguez , Cristiana Pelorosso , Kaicen Zhu , Anna Maria Buccoliero , Maristela Onozato , Hussein Mohamed , Jonathan Serrano , Lily Tredwin , Marianna Garonzi , Claudio Forcato , Briana Zeck , Sitharam Ramaswami , James Stafford , Arline Faustin , Daniel Friedman , Eveline Teresa Hidalgo , David Zagzag , Jane Skok , Adriana Heguy , Luis Chiriboga , Valerio Conti , Renzo Guerrini , A John Iafrate , Orrin Devinsky , Aristotelis Tsirigos , John G Golfinos , Matija Snuderl

Transcriptomic profiles conducive to immune-mediated tumor rejection in human breast cancer skin metastases treated with Imiquimod.

Scientific reports

Avec: Mariya Rozenblit , Wouter Hendrickx , Adriana Heguy , Luis Chiriboga , Cynthia Loomis , Karina Ray , Farbod Darvishian , Mikala Egeblad , Sandra Demaria , Francesco M Marincola , Davide Bedognetti , Sylvia Adams

Experimental Variables that Affect Human Hepatocyte AAV Transduction in Liver Chimeric Mice.

Molecular therapy. Methods & clinical development

Avec: Chenhui Zou , Koen O A Vercauteren , Eleftherios Michailidis , Mohammad Kabbani , Irene Zoluthkin , Corrine Quirk , Luis Chiriboga , Mustafa Yazicioglu , Xavier M Anguela , Philip Meuleman , Katherine A High , Roland W Herzog , Ype P de Jong

Evidence for continuity of interstitial spaces across tissue and organ boundaries in humans.

Communications biology

Avec: Odise Cenaj , Douglas H R Allison , Rami Imam , Briana Zeck , Lilly M Drohan , Luis Chiriboga , Jessica Llewellyn , Cheng Z Liu , Young Nyun Park , Rebecca G Wells , Neil D Theise

Mouse characteristics that affect establishing xenografts from hepatocellular carcinoma patient biopsies in the United States.

Cancer medicine

Avec: Chenhui Zou , Imane El Dika , Koen O A Vercauteren , Marinela Capanu , Joanne Chou , Jinru Shia , Jill Pilet , Corrine Quirk , Gadi Lalazar , Linda Andrus , Mohammad Kabbani , Amin Yaqubie , Danny Khalil , Taha Mergoub , Luis Chiriboga , Charles M Rice , Ghassan K Abou-Alfa , Ype P de Jong

Automated and robust extraction of genomic DNA from various leftover blood samples.

Analytical biochemistry

Avec: Jianlan You , Jan Osea , Sandra Mendoza , Tomoe Shiomi , Estefania Gallego , Bernice Pham , Angie Kim , Abraham Sinay-Smith , Zasha Zayas , Antonio G Neto , Ludovic Boytard , Luis Chiriboga , Paolo Cotzia , Andre L Moreira

The diagnostic utility of EZH2 H-score and Ki-67 index in non-invasive breast apocrine lesions.

Pathology, research and practice

Avec: Theodore Vougiouklakis , Brendan J Belovarac , Andrew Lytle , Luis Chiriboga , Ugur Ozerdem

Keratin 19 and mesenchymal markers for evaluation of epithelial-mesenchymal transition and stem cell niche components in primary biliary cholangitis by sequential elution-stripping multiplex immunohistochemistry.

Journal of histotechnology

Avec: John David Paulsen , Briana Zeck , Katherine Sun , Camila Simoes , Neil D Theise , Luis Chiriboga

The stress response regulator HSF1 modulates natural killer cell anti-tumour immunity.

Nature cell biology

Avec: Kathryn Hockemeyer , Theodore Sakellaropoulos , Xufeng Chen , Olha Ivashkiv , Maria Sirenko , Hua Zhou , Giovanni Gambi , Elena Battistello , Kleopatra Avrampou , Zhengxi Sun , Maria Guillamot , Luis Chiriboga , George Jour , Igor Dolgalev , Kate Corrigan , Kamala Bhatt , Iman Osman , Aristotelis Tsirigos , Nikos Kourtis , Iannis Aifantis

Antiviral innate immune memory in alveolar macrophages following SARS-CoV-2 infection ameliorates secondary influenza A virus disease.

Immunity

Avec: Alexander Lercher , Jin-Gyu Cheong , Michael J Bale , Chenyang Jiang , Hans-Heinrich Hoffmann , Alison W Ashbrook , Tyler Lewy , Yue S Yin , Corrine Quirk , Emma J DeGrace , Luis Chiriboga , Brad R Rosenberg , Steven Z Josefowicz , Charles M Rice

Expansion, in vivo-ex vivo cycling, and genetic manipulation of primary human hepatocytes.

Proceedings of the National Academy of Sciences of the United States of America

Avec: Eleftherios Michailidis , Koen Vercauteren , Liliana Mancio-Silva , Linda Andrus , Cyprien Jahan , Inna Ricardo-Lax , Chenhui Zou , Mohammad Kabbani , Paul Park , Corrine Quirk , Christina Pyrgaki , Brandon Razooky , Lieven Verhoye , Irene Zoluthkin , Wei-Yu Lu , Stuart J Forbes , Luis Chiriboga , Neil D Theise , Roland W Herzog , Hiroshi Suemizu , William M Schneider , Amir Shlomai , Philip Meuleman , Sangeeta N Bhatia , Charles M Rice , Ype P de Jong

Chibby is a weak regulator of β-catenin activity in gastric epithelium.

Journal of cellular physiology

Avec: Feng-Qian Li , Luis Chiriboga , Margaret A Black , Ken-Ichi Takemaru , Robert D Raffaniello

Cell Surface Notch Ligand DLL3 is a Therapeutic Target in Isocitrate Dehydrogenase-mutant Glioma.

Clinical cancer research : an official journal of the American Association for Cancer Research

Avec: Marissa Spino , Sylvia C Kurz , Luis Chiriboga , Jonathan Serrano , Briana Zeck , Namita Sen , Seema Patel , Guomiao Shen , Varshini Vasudevaraja , Aristotelis Tsirigos , Carter M Suryadevara , Joshua D Frenster , Kensuke Tateishi , Hiroaki Wakimoto , Rajan Jain , Howard A Riina , Theodore P Nicolaides , Erik P Sulman , Daniel P Cahill , John G Golfinos , Kumiko Isse , Laura R Saunders , David Zagzag , Dimitris G Placantonakis , Matija Snuderl , Andrew S Chi

Antiviral innate immune memory in alveolar macrophages following SARS-CoV-2 infection.

bioRxiv : the preprint server for biology

Avec: Alexander Lercher , Jin-Gyu Cheong , Chenyang Jiang , Hans-Heinrich Hoffmann , Alison W Ashbrook , Yue S Yin , Corrine Quirk , Emma J DeGrace , Luis Chiriboga , Brad R Rosenberg , Steven Z Josefowicz , Charles M Rice

Spatial transcriptomics stratifies psoriatic disease severity by emergent cellular ecosystems.

Science immunology

Avec: Rochelle L Castillo , Ikjot Sidhu , Igor Dolgalev , Tinyi Chu , Aleksandr Prystupa , Ipsita Subudhi , Di Yan , Piotr Konieczny , Brandon Hsieh , Rebecca H Haberman , Shanmugapriya Selvaraj , Tomoe Shiomi , Rhina Medina , Parvathy Vasudevanpillai Girija , Adriana Heguy , Cynthia A Loomis , Luis Chiriboga , Christopher Ritchlin , Maria De La Luz Garcia-Hernandez , John Carucci , Shane A Meehan , Andrea L Neimann , Johann E Gudjonsson , Jose U Scher , Shruti Naik

A Phase 1/2 multicenter trial of DKN-01 as monotherapy or in combination with docetaxel for the treatment of metastatic castration-resistant prostate cancer (mCRPC).

Prostate cancer and prostatic diseases

Avec: David R Wise , Russell K Pachynski , Samuel R Denmeade , Rahul R Aggarwal , Jiehui Deng , Victor Adorno Febles , Arjun V Balar , Minas P Economides , Cynthia Loomis , Shanmugapriya Selvaraj , Michael Haas , Michael H Kagey , Walter Newman , Jason Baum , Andrea B Troxel , Sarah Griglun , Dayna Leis , Nina Yang , Viktoriya Aranchiy , Sabrina Machado , Erika Waalkes , Gabrielle Gargano , Nadia Soamchand , Amrutesh Puranik , Pratip Chattopadhyay , Ezeddin Fedal , Fang-Ming Deng , Qinghu Ren , Luis Chiriboga , Jonathan Melamed , Cynthia A Sirard , Kwok-Kin Wong

Validation of PD-L1 clone 22C3 immunohistochemical stain on two Ventana DISCOVERY autostainer models: detailed protocols, test performance characteristics, and interobserver reliability analyses.

Journal of histotechnology

Avec: Atreyee Basu , Luis Chiriboga , Navneet Narula , Fang Zhou , Andre L Moreira

Human hepatocyte PNPLA3-148M exacerbates rapid non-alcoholic fatty liver disease development in chimeric mice.

Cell reports

Avec: Mohammad Kabbani , Eleftherios Michailidis , Sandra Steensels , Clifton G Fulmer , Joseph M Luna , Jérémie Le Pen , Matteo Tardelli , Brandon Razooky , Inna Ricardo-Lax , Chenhui Zou , Briana Zeck , Ansgar F Stenzel , Corrine Quirk , Lander Foquet , Alison W Ashbrook , William M Schneider , Serkan Belkaya , Gadi Lalazar , Yupu Liang , Meredith Pittman , Lindsey Devisscher , Hiroshi Suemizu , Neil D Theise , Luis Chiriboga , David E Cohen , Robert Copenhaver , Markus Grompe , Philip Meuleman , Baran A Ersoy , Charles M Rice , Ype P de Jong

Guide for collecting and reporting metadata on protocol variables and parameters from slide-based histotechnology assays to enhance reproducibility.

Journal of histotechnology

Avec: Luis Chiriboga , Gayle M Callis , Yongfu Wang , Elizabeth Chlipala

Hematoxylin and Eosin staining of PhenoCycler® Fusion flow cell slides.

Journal of histotechnology

Avec: Tomoe Shiomi , Anna Eichinger , Luis Chiriboga

Inflammation in the tumor-adjacent lung as a predictor of clinical outcome in lung adenocarcinoma.

Nature communications

Avec: Igor Dolgalev , Hua Zhou , Nina Murrell , Hortense Le , Theodore Sakellaropoulos , Nicolas Coudray , Kelsey Zhu , Varshini Vasudevaraja , Anna Yeaton , Chandra Goparaju , Yonghua Li , Imran Sulaiman , Jun-Chieh J Tsay , Peter Meyn , Hussein Mohamed , Iris Sydney , Tomoe Shiomi , Sitharam Ramaswami , Navneet Narula , Ruth Kulicke , Fred P Davis , Nicolas Stransky , Gromoslaw A Smolen , Wei-Yi Cheng , James Cai , Salman Punekar , Vamsidhar Velcheti , Daniel H Sterman , J T Poirier , Ben Neel , Kwok-Kin Wong , Luis Chiriboga , Adriana Heguy , Thales Papagiannakopoulos , Bettina Nadorp , Matija Snuderl , Leopoldo N Segal , Andre L Moreira , Harvey I Pass , Aristotelis Tsirigos

Mapping the landscape of histomorphological cancer phenotypes using self-supervised learning on unannotated pathology slides.

Nature communications

Avec: Adalberto Claudio Quiros , Nicolas Coudray , Anna Yeaton , Xinyu Yang , Bojing Liu , Hortense Le , Luis Chiriboga , Afreen Karimkhan , Navneet Narula , David A Moore , Christopher Y Park , Harvey Pass , Andre L Moreira , John Le Quesne , Aristotelis Tsirigos , Ke Yuan

Expression profiling of the adhesion G protein-coupled receptor GPR133 (ADGRD1) in glioma subtypes.

Neuro-oncology advances

Avec: Joshua D Frenster , Michael Kader , Scott Kamen , James Sun , Luis Chiriboga , Jonathan Serrano , Devin Bready , Danielle Golub , Niklas Ravn-Boess , Gabriele Stephan , Andrew S Chi , Sylvia C Kurz , Rajan Jain , Christopher Y Park , David Fenyo , Ines Liebscher , Torsten Schöneberg , Giselle Wiggin , Robert Newman , Matt Barnes , John K Dickson , Douglas J MacNeil , Xinyan Huang , Nadim Shohdy , Matija Snuderl , David Zagzag , Dimitris G Placantonakis

Réseau de co-auteurs

Corrine Quirk 6 collaborations

Briana Zeck 5 collaborations

Aristotelis Tsirigos 5 collaborations

Charles M Rice 5 collaborations

Adriana Heguy 4 collaborations

Matija Snuderl 4 collaborations

Chenhui Zou 4 collaborations

Mohammad Kabbani 4 collaborations

Ype P de Jong 4 collaborations

Neil D Theise 4 collaborations

Tomoe Shiomi 4 collaborations

Andre L Moreira 4 collaborations

Varshini Vasudevaraja 3 collaborations

Jonathan Serrano 3 collaborations

David Zagzag 3 collaborations

Eleftherios Michailidis 3 collaborations

Philip Meuleman 3 collaborations

Igor Dolgalev 3 collaborations

Alison W Ashbrook 3 collaborations

Navneet Narula 3 collaborations

Hussein Mohamed 2 collaborations

Sitharam Ramaswami 2 collaborations

John G Golfinos 2 collaborations

Cynthia Loomis 2 collaborations

Koen O A Vercauteren 2 collaborations

Irene Zoluthkin 2 collaborations

Roland W Herzog 2 collaborations

Gadi Lalazar 2 collaborations

Linda Andrus 2 collaborations

Theodore Sakellaropoulos 2 collaborations

Hua Zhou 2 collaborations

Alexander Lercher 2 collaborations

Jin-Gyu Cheong 2 collaborations

Chenyang Jiang 2 collaborations

Hans-Heinrich Hoffmann 2 collaborations

Yue S Yin 2 collaborations

Emma J DeGrace 2 collaborations

Brad R Rosenberg 2 collaborations

Steven Z Josefowicz 2 collaborations

Inna Ricardo-Lax 2 collaborations

Brandon Razooky 2 collaborations

Hiroshi Suemizu 2 collaborations

William M Schneider 2 collaborations

Sylvia C Kurz 2 collaborations

Joshua D Frenster 2 collaborations

Rajan Jain 2 collaborations

Dimitris G Placantonakis 2 collaborations

Andrew S Chi 2 collaborations

Shanmugapriya Selvaraj 2 collaborations

Kwok-Kin Wong 2 collaborations

Hortense Le 2 collaborations

Nicolas Coudray 2 collaborations

Anna Yeaton 2 collaborations

Christopher Y Park 2 collaborations

Javier Hernaez Rodriguez 1 collaboration

Cristiana Pelorosso 1 collaboration

Kaicen Zhu 1 collaboration

Anna Maria Buccoliero 1 collaboration

Maristela Onozato 1 collaboration

Lily Tredwin 1 collaboration

Marianna Garonzi 1 collaboration

Claudio Forcato 1 collaboration

James Stafford 1 collaboration

Arline Faustin 1 collaboration

Daniel Friedman 1 collaboration

Eveline Teresa Hidalgo 1 collaboration

Jane Skok 1 collaboration

Valerio Conti 1 collaboration

Renzo Guerrini 1 collaboration

A John Iafrate 1 collaboration

Orrin Devinsky 1 collaboration

Mariya Rozenblit 1 collaboration

Wouter Hendrickx 1 collaboration

Karina Ray 1 collaboration

Farbod Darvishian 1 collaboration

Mikala Egeblad 1 collaboration

Sandra Demaria 1 collaboration

Francesco M Marincola 1 collaboration

Davide Bedognetti 1 collaboration

Sylvia Adams 1 collaboration

Mustafa Yazicioglu 1 collaboration

Xavier M Anguela 1 collaboration

Katherine A High 1 collaboration

Odise Cenaj 1 collaboration

Douglas H R Allison 1 collaboration

Rami Imam 1 collaboration

Lilly M Drohan 1 collaboration

Jessica Llewellyn 1 collaboration

Cheng Z Liu 1 collaboration

Young Nyun Park 1 collaboration

Rebecca G Wells 1 collaboration

Imane El Dika 1 collaboration

Marinela Capanu 1 collaboration

Joanne Chou 1 collaboration

Jinru Shia 1 collaboration

Jill Pilet 1 collaboration

Amin Yaqubie 1 collaboration

Danny Khalil 1 collaboration

Taha Mergoub 1 collaboration

Ghassan K Abou-Alfa 1 collaboration

Jianlan You 1 collaboration

Jan Osea 1 collaboration

Sandra Mendoza 1 collaboration

Estefania Gallego 1 collaboration

Bernice Pham 1 collaboration

Angie Kim 1 collaboration

Abraham Sinay-Smith 1 collaboration

Zasha Zayas 1 collaboration

Antonio G Neto 1 collaboration

Ludovic Boytard 1 collaboration

Paolo Cotzia 1 collaboration

Theodore Vougiouklakis 1 collaboration

Brendan J Belovarac 1 collaboration

Andrew Lytle 1 collaboration

Ugur Ozerdem 1 collaboration

John David Paulsen 1 collaboration

Katherine Sun 1 collaboration

Camila Simoes 1 collaboration

Kathryn Hockemeyer 1 collaboration

Xufeng Chen 1 collaboration

Olha Ivashkiv 1 collaboration

Maria Sirenko 1 collaboration

Giovanni Gambi 1 collaboration

Elena Battistello 1 collaboration

Kleopatra Avrampou 1 collaboration

Zhengxi Sun 1 collaboration

Maria Guillamot 1 collaboration

George Jour 1 collaboration

Kate Corrigan 1 collaboration

Kamala Bhatt 1 collaboration

Iman Osman 1 collaboration

Nikos Kourtis 1 collaboration

Iannis Aifantis 1 collaboration

Michael J Bale 1 collaboration

Tyler Lewy 1 collaboration

Koen Vercauteren 1 collaboration

Liliana Mancio-Silva 1 collaboration

Cyprien Jahan 1 collaboration

Paul Park 1 collaboration

Christina Pyrgaki 1 collaboration

Lieven Verhoye 1 collaboration

Wei-Yu Lu 1 collaboration

Stuart J Forbes 1 collaboration

Amir Shlomai 1 collaboration

Sangeeta N Bhatia 1 collaboration

Feng-Qian Li 1 collaboration

Margaret A Black 1 collaboration

Ken-Ichi Takemaru 1 collaboration

Robert D Raffaniello 1 collaboration

Marissa Spino 1 collaboration

Namita Sen 1 collaboration

Seema Patel 1 collaboration

Guomiao Shen 1 collaboration

Carter M Suryadevara 1 collaboration

Kensuke Tateishi 1 collaboration

Hiroaki Wakimoto 1 collaboration

Howard A Riina 1 collaboration

Theodore P Nicolaides 1 collaboration

Erik P Sulman 1 collaboration

Daniel P Cahill 1 collaboration

Kumiko Isse 1 collaboration

Laura R Saunders 1 collaboration

Rochelle L Castillo 1 collaboration

Ikjot Sidhu 1 collaboration

Tinyi Chu 1 collaboration

Aleksandr Prystupa 1 collaboration

Ipsita Subudhi 1 collaboration

Di Yan 1 collaboration

Piotr Konieczny 1 collaboration

Brandon Hsieh 1 collaboration

Rebecca H Haberman 1 collaboration

Rhina Medina 1 collaboration

Parvathy Vasudevanpillai Girija 1 collaboration

Cynthia A Loomis 1 collaboration

Christopher Ritchlin 1 collaboration

Maria De La Luz Garcia-Hernandez 1 collaboration

John Carucci 1 collaboration

Shane A Meehan 1 collaboration

Andrea L Neimann 1 collaboration

Johann E Gudjonsson 1 collaboration

Jose U Scher 1 collaboration

Shruti Naik 1 collaboration

David R Wise 1 collaboration

Russell K Pachynski 1 collaboration

Samuel R Denmeade 1 collaboration

Rahul R Aggarwal 1 collaboration

Jiehui Deng 1 collaboration

Victor Adorno Febles 1 collaboration

Arjun V Balar 1 collaboration

Minas P Economides 1 collaboration

Michael Haas 1 collaboration

Michael H Kagey 1 collaboration

Walter Newman 1 collaboration

Jason Baum 1 collaboration

Andrea B Troxel 1 collaboration

Sarah Griglun 1 collaboration

Dayna Leis 1 collaboration

Nina Yang 1 collaboration

Viktoriya Aranchiy 1 collaboration

Sabrina Machado 1 collaboration

Erika Waalkes 1 collaboration

Gabrielle Gargano 1 collaboration

Nadia Soamchand 1 collaboration

Amrutesh Puranik 1 collaboration

Pratip Chattopadhyay 1 collaboration

Ezeddin Fedal 1 collaboration

Fang-Ming Deng 1 collaboration

Qinghu Ren 1 collaboration

Jonathan Melamed 1 collaboration

Cynthia A Sirard 1 collaboration

Atreyee Basu 1 collaboration

Fang Zhou 1 collaboration

Sandra Steensels 1 collaboration

Clifton G Fulmer 1 collaboration

Joseph M Luna 1 collaboration

Jérémie Le Pen 1 collaboration

Matteo Tardelli 1 collaboration

Ansgar F Stenzel 1 collaboration

Lander Foquet 1 collaboration

Serkan Belkaya 1 collaboration

Yupu Liang 1 collaboration

Meredith Pittman 1 collaboration

Lindsey Devisscher 1 collaboration

David E Cohen 1 collaboration

Robert Copenhaver 1 collaboration

Markus Grompe 1 collaboration

Baran A Ersoy 1 collaboration

Gayle M Callis 1 collaboration

Yongfu Wang 1 collaboration

Elizabeth Chlipala 1 collaboration

Anna Eichinger 1 collaboration

Nina Murrell 1 collaboration

Kelsey Zhu 1 collaboration

Chandra Goparaju 1 collaboration

Yonghua Li 1 collaboration

Imran Sulaiman 1 collaboration

Jun-Chieh J Tsay 1 collaboration

Peter Meyn 1 collaboration

Iris Sydney 1 collaboration

Ruth Kulicke 1 collaboration

Fred P Davis 1 collaboration

Nicolas Stransky 1 collaboration

Gromoslaw A Smolen 1 collaboration

Wei-Yi Cheng 1 collaboration

James Cai 1 collaboration

Salman Punekar 1 collaboration

Vamsidhar Velcheti 1 collaboration

Daniel H Sterman 1 collaboration

J T Poirier 1 collaboration

Ben Neel 1 collaboration

Thales Papagiannakopoulos 1 collaboration

Bettina Nadorp 1 collaboration

Leopoldo N Segal 1 collaboration

Harvey I Pass 1 collaboration

Adalberto Claudio Quiros 1 collaboration

Xinyu Yang 1 collaboration

Bojing Liu 1 collaboration

Afreen Karimkhan 1 collaboration

David A Moore 1 collaboration

Harvey Pass 1 collaboration

John Le Quesne 1 collaboration

Ke Yuan 1 collaboration

Michael Kader 1 collaboration

Scott Kamen 1 collaboration

James Sun 1 collaboration

Devin Bready 1 collaboration

Danielle Golub 1 collaboration

Niklas Ravn-Boess 1 collaboration

Gabriele Stephan 1 collaboration

David Fenyo 1 collaboration

Ines Liebscher 1 collaboration

Torsten Schöneberg 1 collaboration

Giselle Wiggin 1 collaboration

Robert Newman 1 collaboration

Matt Barnes 1 collaboration

John K Dickson 1 collaboration

Douglas J MacNeil 1 collaboration

Xinyan Huang 1 collaboration

Nadim Shohdy 1 collaboration