Luis Delaye

Affiliations

Genetic Engineering Department, Unidad Irapuato, CINVESTAV-IPN, Irapuato, Mexico.

Publications (19)

Twisting development, the birth of a potential new gene.

iScience

Avec: Nayelli Marsch-Martínez , J Irepan Reyes-Olalde , Antonio Chalfun-Junior , Marian Bemer , Yolanda Durán-Medina , Juan Carlos Ochoa-Sánchez , Herenia Guerrero-Largo , Humberto Herrera-Ubaldo , Jurriaan Mes , Alejandra Chacón , Rocio Escobar-Guzmán , Andy Pereira , Luis Herrera-Estrella , Gerco C Angenent , Luis Delaye , Stefan de Folter

Untangling the Evolution of the Receptor-Binding Motif of SARS-CoV-2.

Journal of molecular evolution

Avec: Luis Delaye , Lizbeth Román-Padilla

Chromosome-Level Genome Assembly of the American Cranberry (

Frontiers in plant science

Avec: Luis Diaz-Garcia , Luis Fernando Garcia-Ortega , Maria González-Rodríguez , Luis Delaye , Massimo Iorizzo , Juan Zalapa

Inferring Horizontal Gene Transfer with DarkHorse, Phylomizer, and ETE Toolkits.

Methods in molecular biology (Clifton, N.J.)

Avec: Luis Delaye , Carlos Vargas , Amparo Latorre , Andrés Moya

Draft Genome Sequence of a Kazachstania humilis Strain Isolated from Agave Fermentation.

Microbiology resource announcements

Avec: Luis F García-Ortega , Maritrini Colón-González , Iván Sedeño , Erick Santiago-Garduño , J Abraham Avelar-Rivas , Manuel R Kirchmayr , Alexander DeLuna , Luis Delaye , Lucia Morales , Eugenio Mancera

Yeast diversity in open agave fermentations across Mexico.

Yeast (Chichester, England)

Avec: Porfirio Gallegos-Casillas , Luis F García-Ortega , Adriana Espinosa-Cantú , J Abraham Avelar-Rivas , Carolina G Torres-Lagunes , Adrián Cano-Ricardez , Ángela M García-Acero , Susana Ruiz-Castro , Mayra Flores-Barraza , Alejandra Castillo , Fernando González-Zozaya , América Delgado-Lemus , Francisco Molina-Freaner , Cuauhtémoc Jacques-Hernández , Antonio Hernández-López , Luis Delaye , Xitlali Aguirre-Dugua , Manuel R Kirchmayr , Lucia Morales , Eugenio Mancera , Alexander DeLuna

Transcriptome analysis of bolting in A. tequilana reveals roles for florigen, MADS, fructans and gibberellins.

BMC genomics

Avec: Emmanuel Avila de Dios , Luis Delaye , June Simpson

Changes in the G

Virus genes

Avec: B E González-Pacheco , L Delaye , D Ochoa , R Rojas , L Silva-Rosales

RNA polymerases in strict endosymbiont bacteria with extreme genome reduction show distinct erosions that might result in limited and differential promoter recognition.

PloS one

Avec: Cynthia Paola Rangel-Chávez , Edgardo Galán-Vásquez , Azucena Pescador-Tapia , Luis Delaye , Agustino Martínez-Antonio

An Upgrade on the Surveillance System of SARS-CoV-2: Deployment of New Methods for Genetic Inspection.

International journal of molecular sciences

Avec: José Francisco Muñoz-Valle , Alberto Antony Venancio-Landeros , Rocío Sánchez-Sánchez , Karen Reyes-Díaz , Byron Galindo-Ornelas , Wendy Susana Hérnandez-Monjaraz , Alejandra García-Ríos , Luis Fernando García-Ortega , Jorge Hernández-Bello , Marcela Peña-Rodríguez , Natali Vega-Magaña , Luis Delaye , Mauricio Díaz-Sánchez , Octavio Patricio García-González

Comparing the evolutionary dynamics of predominant SARS-CoV-2 virus lineages co-circulating in Mexico.

eLife

Avec: Hugo G Castelán-Sánchez , Luis Delaye , Rhys P D Inward , Simon Dellicour , Bernardo Gutierrez , Natalia Martinez de la Vina , Celia Boukadida , Oliver G Pybus , Guillermo de Anda Jáuregui , Plinio Guzmán , Marisol Flores-Garrido , Óscar Fontanelli , Maribel Hernández Rosales , Amilcar Meneses , Gabriela Olmedo-Alvarez , Alfredo Heriberto Herrera-Estrella , Alejandro Sánchez-Flores , José Esteban Muñoz-Medina , Andreu Comas-García , Bruno Gómez-Gil , Selene Zárate , Blanca Taboada , Susana López , Carlos F Arias , Moritz U G Kraemer , Antonio Lazcano , Marina Escalera Zamudio

Evolution of Base Excision Repair in Entamoeba histolytica is shaped by gene loss, gene duplication, and lateral gene transfer.

DNA repair

Avec: Carlos H Trasviña-Arenas , Sheila S David , Luis Delaye , Elisa Azuara-Liceaga , Luis G Brieba

Phylogenomics and population genomics of SARS-CoV-2 in Mexico during the pre-vaccination stage reveals variants of interest B.1.1.28.4 and B.1.1.222 or B.1.1.519 and the nucleocapsid mutation S194L associated with symptoms.

Microbial genomics

Avec: Francisco Barona-Gómez , Luis Delaye , Erik Díaz-Valenzuela , Fabien Plisson , Arely Cruz-Pérez , Mauricio Díaz-Sánchez , Christian A García-Sepúlveda , Alejandro Sanchez-Flores , Rafael Pérez-Abreu , Francisco J Valencia-Valdespino , Natali Vega-Magaña , José Francisco Muñoz-Valle , Octavio Patricio García-González , Sofía Bernal-Silva , Andreu Comas-García , Angélica Cibrián-Jaramillo

Driven progressive evolution of genome sequence complexity in Cyanobacteria.

Scientific reports

Avec: Andrés Moya , José L Oliver , Miguel Verdú , Luis Delaye , Vicente Arnau , Pedro Bernaola-Galván , Rebeca de la Fuente , Wladimiro Díaz , Cristina Gómez-Martín , Francisco M González , Amparo Latorre , Ricardo Lebrón , Ramón Román-Roldán

The Alpha Variant (B.1.1.7) of SARS-CoV-2 Failed to Become Dominant in Mexico.

Microbiology spectrum

Avec: Selene Zárate , Blanca Taboada , José Esteban Muñoz-Medina , Pavel Iša , Alejandro Sanchez-Flores , Celia Boukadida , Alfredo Herrera-Estrella , Nelly Selem Mojica , Mauricio Rosales-Rivera , Bruno Gómez-Gil , Angel Gustavo Salas-Lais , Clara Esperanza Santacruz-Tinoco , Héctor Montoya-Fuentes , Julio Elias Alvarado-Yaah , Gloria María Molina-Salinas , Gloria Elena Espinoza-Ayala , José Antonio Enciso-Moreno , Rosa María Gutiérrez-Ríos , Antonio Loza , Joaquín Moreno-Contreras , Rodrigo García-López , Xaira Rivera-Gutierrez , Andreu Comas-García , Rosa María Wong-Chew , Maria-Eugenia Jiménez-Corona , Rosa María Del Angel , Joel Armando Vazquez-Perez , Margarita Matías-Florentino , Marissa Pérez-García , Santiago Ávila-Ríos , Hugo G Castelán-Sánchez , Luis Delaye , León P Martínez-Castilla , Marina Escalera-Zamudio , Susana López , Carlos F Arias

Emergence and widespread circulation of a recombinant SARS-CoV-2 lineage in North America.

Cell host & microbe

Avec: Bernardo Gutierrez , Hugo G Castelán Sánchez , Darlan da Silva Candido , Ben Jackson , Shay Fleishon , Renaud Houzet , Christopher Ruis , Luis Delaye , Nuno R Faria , Andrew Rambaut , Oliver G Pybus , Marina Escalera-Zamudio

Translation Comes First: Ancient and Convergent Selection of Codon Usage Bias Across Prokaryotic Genomes.

Journal of molecular evolution

Avec: Francisco González-Serrano , Cei Abreu-Goodger , Luis Delaye

CurSa: scripts to curate metadata and sample genomes from GISAID for analysis and display in nextstrain and microreact.

Biology methods & protocols

Avec: Luis Delaye

The Unfinished Reconstructed Nature of the Last Universal Common Ancestor.

Journal of molecular evolution

Avec: Luis Delaye

Réseau de co-auteurs

Andreu Comas-García 3 collaborations

Amparo Latorre 2 collaborations

Andrés Moya 2 collaborations

Luis F García-Ortega 2 collaborations

J Abraham Avelar-Rivas 2 collaborations

Manuel R Kirchmayr 2 collaborations

Alexander DeLuna 2 collaborations

Lucia Morales 2 collaborations

Eugenio Mancera 2 collaborations

José Francisco Muñoz-Valle 2 collaborations

Natali Vega-Magaña 2 collaborations

Mauricio Díaz-Sánchez 2 collaborations

Octavio Patricio García-González 2 collaborations

Hugo G Castelán-Sánchez 2 collaborations

Bernardo Gutierrez 2 collaborations

Celia Boukadida 2 collaborations

Oliver G Pybus 2 collaborations

José Esteban Muñoz-Medina 2 collaborations

Bruno Gómez-Gil 2 collaborations

Selene Zárate 2 collaborations

Blanca Taboada 2 collaborations

Susana López 2 collaborations

Carlos F Arias 2 collaborations

Alejandro Sanchez-Flores 2 collaborations

Marina Escalera-Zamudio 2 collaborations

Nayelli Marsch-Martínez 1 collaboration

J Irepan Reyes-Olalde 1 collaboration

Antonio Chalfun-Junior 1 collaboration

Marian Bemer 1 collaboration

Yolanda Durán-Medina 1 collaboration

Juan Carlos Ochoa-Sánchez 1 collaboration

Herenia Guerrero-Largo 1 collaboration

Humberto Herrera-Ubaldo 1 collaboration

Jurriaan Mes 1 collaboration

Alejandra Chacón 1 collaboration

Rocio Escobar-Guzmán 1 collaboration

Andy Pereira 1 collaboration

Luis Herrera-Estrella 1 collaboration

Gerco C Angenent 1 collaboration

Stefan de Folter 1 collaboration

Lizbeth Román-Padilla 1 collaboration

Luis Diaz-Garcia 1 collaboration

Luis Fernando Garcia-Ortega 1 collaboration

Maria González-Rodríguez 1 collaboration

Massimo Iorizzo 1 collaboration

Juan Zalapa 1 collaboration

Carlos Vargas 1 collaboration

Maritrini Colón-González 1 collaboration

Iván Sedeño 1 collaboration

Erick Santiago-Garduño 1 collaboration

Porfirio Gallegos-Casillas 1 collaboration

Adriana Espinosa-Cantú 1 collaboration

Carolina G Torres-Lagunes 1 collaboration

Adrián Cano-Ricardez 1 collaboration

Ángela M García-Acero 1 collaboration

Susana Ruiz-Castro 1 collaboration

Mayra Flores-Barraza 1 collaboration

Alejandra Castillo 1 collaboration

Fernando González-Zozaya 1 collaboration

América Delgado-Lemus 1 collaboration

Francisco Molina-Freaner 1 collaboration

Cuauhtémoc Jacques-Hernández 1 collaboration

Antonio Hernández-López 1 collaboration

Xitlali Aguirre-Dugua 1 collaboration

Emmanuel Avila de Dios 1 collaboration

June Simpson 1 collaboration

B E González-Pacheco 1 collaboration

L Delaye 1 collaboration

D Ochoa 1 collaboration

R Rojas 1 collaboration

L Silva-Rosales 1 collaboration

Cynthia Paola Rangel-Chávez 1 collaboration

Edgardo Galán-Vásquez 1 collaboration

Azucena Pescador-Tapia 1 collaboration

Agustino Martínez-Antonio 1 collaboration

Alberto Antony Venancio-Landeros 1 collaboration

Rocío Sánchez-Sánchez 1 collaboration

Karen Reyes-Díaz 1 collaboration

Byron Galindo-Ornelas 1 collaboration

Wendy Susana Hérnandez-Monjaraz 1 collaboration

Alejandra García-Ríos 1 collaboration

Luis Fernando García-Ortega 1 collaboration

Jorge Hernández-Bello 1 collaboration

Marcela Peña-Rodríguez 1 collaboration

Rhys P D Inward 1 collaboration

Simon Dellicour 1 collaboration

Natalia Martinez de la Vina 1 collaboration

Guillermo de Anda Jáuregui 1 collaboration

Plinio Guzmán 1 collaboration

Marisol Flores-Garrido 1 collaboration

Óscar Fontanelli 1 collaboration

Maribel Hernández Rosales 1 collaboration

Amilcar Meneses 1 collaboration

Gabriela Olmedo-Alvarez 1 collaboration

Alfredo Heriberto Herrera-Estrella 1 collaboration

Alejandro Sánchez-Flores 1 collaboration

Moritz U G Kraemer 1 collaboration

Antonio Lazcano 1 collaboration

Marina Escalera Zamudio 1 collaboration

Carlos H Trasviña-Arenas 1 collaboration

Sheila S David 1 collaboration

Elisa Azuara-Liceaga 1 collaboration

Luis G Brieba 1 collaboration

Francisco Barona-Gómez 1 collaboration

Erik Díaz-Valenzuela 1 collaboration

Fabien Plisson 1 collaboration

Arely Cruz-Pérez 1 collaboration

Christian A García-Sepúlveda 1 collaboration

Rafael Pérez-Abreu 1 collaboration

Francisco J Valencia-Valdespino 1 collaboration

Sofía Bernal-Silva 1 collaboration

Angélica Cibrián-Jaramillo 1 collaboration

José L Oliver 1 collaboration

Miguel Verdú 1 collaboration

Vicente Arnau 1 collaboration

Pedro Bernaola-Galván 1 collaboration

Rebeca de la Fuente 1 collaboration

Wladimiro Díaz 1 collaboration

Cristina Gómez-Martín 1 collaboration

Francisco M González 1 collaboration

Ricardo Lebrón 1 collaboration

Ramón Román-Roldán 1 collaboration

Pavel Iša 1 collaboration

Alfredo Herrera-Estrella 1 collaboration

Nelly Selem Mojica 1 collaboration

Mauricio Rosales-Rivera 1 collaboration

Angel Gustavo Salas-Lais 1 collaboration

Clara Esperanza Santacruz-Tinoco 1 collaboration

Héctor Montoya-Fuentes 1 collaboration

Julio Elias Alvarado-Yaah 1 collaboration

Gloria María Molina-Salinas 1 collaboration

Gloria Elena Espinoza-Ayala 1 collaboration

José Antonio Enciso-Moreno 1 collaboration

Rosa María Gutiérrez-Ríos 1 collaboration

Antonio Loza 1 collaboration

Joaquín Moreno-Contreras 1 collaboration

Rodrigo García-López 1 collaboration

Xaira Rivera-Gutierrez 1 collaboration

Rosa María Wong-Chew 1 collaboration

Maria-Eugenia Jiménez-Corona 1 collaboration

Rosa María Del Angel 1 collaboration

Joel Armando Vazquez-Perez 1 collaboration

Margarita Matías-Florentino 1 collaboration

Marissa Pérez-García 1 collaboration

Santiago Ávila-Ríos 1 collaboration

León P Martínez-Castilla 1 collaboration

Hugo G Castelán Sánchez 1 collaboration

Darlan da Silva Candido 1 collaboration

Ben Jackson 1 collaboration

Shay Fleishon 1 collaboration

Renaud Houzet 1 collaboration

Christopher Ruis 1 collaboration

Nuno R Faria 1 collaboration

Andrew Rambaut 1 collaboration

Francisco González-Serrano 1 collaboration

Cei Abreu-Goodger 1 collaboration