Sivan Bercovici

Affiliations

Karius, Inc, Redwood City, CA.

Publications (12)

Circulating microbial cell-free DNA is increased during neutropenia after hematopoietic stem cell transplantation.

Blood advances

Avec: Lily M Blair , Jamilla Akhund-Zade , Zoe A Katsamakis , Olivia C Smibert , Alex E Wolfe , Paul Giardina , John Slingerland , Sivan Bercovici , Miguel-Angel Perales , Ying Taur , Marcel R M van den Brink , Jonathan U Peled , Kate A Markey

Detection of microbial cell-free DNA in maternal and umbilical cord plasma in patients with chorioamnionitis using next generation sequencing.

PloS one

Avec: Russell G Witt , Lily Blair , Michela Frascoli , Michael J Rosen , Quoc-Hung Nguyen , Sivan Bercovici , Simona Zompi , Roberto Romero , Tippi C Mackenzie

Circulating microbial cell-free DNA is associated with inflammatory host-responses in severe pneumonia.

Thorax

Avec: Haopu Yang , Ghady Haidar , Nameer S Al-Yousif , Haris Zia , Daniel Kotok , Asim A Ahmed , Lily Blair , Sudeb Dalai , Sivan Bercovici , Carine Ho , Bryan J McVerry , Alison Morris , Georgios D Kitsios

Clinical Utility of Plasma Microbial Cell-Free DNA Sequencing Among Immunocompromised Patients With Pneumonia.

Open forum infectious diseases

Avec: Deng B Madut , Roy F Chemaly , Sanjeet S Dadwal , Joshua A Hill , Yeon Joo Lee , Ghady Haidar , Alfred Luk , Alexander Drelick , Peter V Chin-Hong , Esther Benamu , Fareed Khawaja , Deepa Nanayakkara , Genovefa A Papanicolaou , Catherine Butkus Small , Monica Fung , Michelle Barron , Thomas Davis , Micah T McClain , Eileen K Maziarz , Armando D Bedoya , Daniel L Gilstrap , Jamie L Todd , Christina E Barkauskas , Madeleine R Heldman , Robert Bigelow , Jeffrey D Leimberger , Ephraim L Tsalik , Olivia Wolf , Mona Mughar , Constance Lau , Nicholas Noll , Desiree Hollemon , Radha Duttagupta , Daniel S Lupu , Sivan Bercovici , Bradley A Perkins , Timothy A Blauwkamp , Vance G Fowler , Thomas L Holland , Stephen P Bergin

Analytical and clinical validation of a microbial cell-free DNA sequencing test for infectious disease.

Nature microbiology

Avec: Timothy A Blauwkamp , Simone Thair , Michael J Rosen , Lily Blair , Martin S Lindner , Igor D Vilfan , Trupti Kawli , Fred C Christians , Shivkumar Venkatasubrahmanyam , Gregory D Wall , Anita Cheung , Zoë N Rogers , Galit Meshulam-Simon , Liza Huijse , Sanjeev Balakrishnan , James V Quinn , Desiree Hollemon , David K Hong , Marla Lay Vaughn , Mickey Kertesz , Sivan Bercovici , Judith C Wilber , Samuel Yang

Plasma Microbial Cell-Free DNA Sequencing from over 15,000 Patients Identified a Broad Spectrum of Pathogens.

Journal of clinical microbiology

Avec: Sarah Y Park , Eliza J Chang , Nathan Ledeboer , Kevin Messacar , Martin S Lindner , Shivkumar Venkatasubrahmanyam , Judith C Wilber , Marla Lay Vaughn , Sivan Bercovici , Bradley A Perkins , Frederick S Nolte

Detection of Mpox Virus Using Microbial Cell-free DNA: the Potential of Pathogen-Agnostic Sequencing for Rapid Identification of Emerging Pathogens.

The Journal of infectious diseases

Avec: Sarah Y Park , Martin S Lindner , Kevin Brick , Nicholas Noll , Rachid Ounit , Luis J Noa , Rabeeya Sabzwari , Ronald Trible , Jason C Sniffen , Prerana Roth , Amir Khan , Anamaria Rodriguez , Syeda Sahra , Michael J Davis , Inderjeet S Brar , Gayathri Balasundaram , Frederick S Nolte , Timothy A Blauwkamp , Bradley A Perkins , Sivan Bercovici

Detection of Borrelia burgdorferi Cell-free DNA in Human Plasma Samples for Improved Diagnosis of Early Lyme Borreliosis.

Clinical infectious diseases : an official publication of the Infectious Diseases Society of America

Avec: John A Branda , Jacob E Lemieux , Lily Blair , Asim A Ahmed , David K Hong , Sivan Bercovici , Timothy A Blauwkamp , Desiree Hollemon , Carine Ho , Klemen Strle , Nitin S Damle , Timothy J Lepore , Nira R Pollock

Rapid detection of invasive Mycobacterium chimaera disease via a novel plasma-based next-generation sequencing test.

BMC infectious diseases

Avec: Jim Nomura , Gunter Rieg , Gary Bluestone , Townson Tsai , Andrew Lai , Dawn Terashita , Sivan Bercovici , David K Hong , Brian P Lee

Plasma Microbial Cell-Free DNA Sequencing in Immunocompromised Patients With Pneumonia: A Prospective Observational Study.

Clinical infectious diseases : an official publication of the Infectious Diseases Society of America

Avec: Stephen P Bergin , Roy F Chemaly , Sanjeet S Dadwal , Joshua A Hill , Yeon Joo Lee , Ghady Haidar , Alfred Luk , Alexander Drelick , Peter V Chin-Hong , Esther Benamu , Fareed Khawaja , Deepa Nanayakkara , Genovefa A Papanicolaou , Catherine Butkus Small , Monica Fung , Michelle A Barron , Thomas Davis , Micah T McClain , Eileen K Maziarz , Deng B Madut , Armando D Bedoya , Daniel L Gilstrap , Jamie L Todd , Christina E Barkauskas , Robert Bigelow , Jeffrey D Leimberger , Ephraim L Tsalik , Olivia Wolf , Mona Mughar , Desiree Hollemon , Radha Duttagupta , Daniel S Lupu , Sivan Bercovici , Bradley A Perkins , Timothy A Blauwkamp , Vance G Fowler , Thomas L Holland

Noninvasive diagnosis of secondary infections in COVID-19 by sequencing of plasma microbial cell-free DNA.

iScience

Avec: Grace Lisius , Radha Duttagupta , Asim A Ahmed , Matthew Hensley , Nameer Al-Yousif , Michael Lu , William Bain , Faraaz Shah , Timothy A Blauwkamp , Sivan Bercovici , Caitlin Schaefer , Shulin Qin , Xiaohong Wang , Yingze Zhang , Kevin J Mitchell , Ellen K Hughes , Jana L Jacobs , Asma Naqvi , Ghady Haidar , John W Mellors , Barbara Methé , Bryan J McVerry , Alison Morris , Georgios D Kitsios

Analytical and clinical validation of direct detection of antimicrobial resistance markers by plasma microbial cell-free DNA sequencing.

Journal of clinical microbiology

Avec: Fred C Christians , Jamilla Akhund-Zade , Kristin Jarman , Shivkumar Venkatasubrahmanyam , Nicholas Noll , Timothy A Blauwkamp , Sivan Bercovici , Aga Zielinska , Amy L Carr , Arryn Craney , Matthew Pike , John Joseph Farrell , Sanjeet Dadwal , James B Wood , Efrat Matkovich , Staci McAdams , Frederick S Nolte

Réseau de co-auteurs

Timothy A Blauwkamp 7 collaborations

Lily Blair 4 collaborations

Ghady Haidar 4 collaborations

Desiree Hollemon 4 collaborations

Bradley A Perkins 4 collaborations

Asim A Ahmed 3 collaborations

Nicholas Noll 3 collaborations

Radha Duttagupta 3 collaborations

Martin S Lindner 3 collaborations

Shivkumar Venkatasubrahmanyam 3 collaborations

David K Hong 3 collaborations

Frederick S Nolte 3 collaborations

Jamilla Akhund-Zade 2 collaborations

Michael J Rosen 2 collaborations

Carine Ho 2 collaborations

Bryan J McVerry 2 collaborations

Alison Morris 2 collaborations

Georgios D Kitsios 2 collaborations

Deng B Madut 2 collaborations

Roy F Chemaly 2 collaborations

Sanjeet S Dadwal 2 collaborations

Joshua A Hill 2 collaborations

Yeon Joo Lee 2 collaborations

Alfred Luk 2 collaborations

Alexander Drelick 2 collaborations

Peter V Chin-Hong 2 collaborations

Esther Benamu 2 collaborations

Fareed Khawaja 2 collaborations

Deepa Nanayakkara 2 collaborations

Genovefa A Papanicolaou 2 collaborations

Catherine Butkus Small 2 collaborations

Monica Fung 2 collaborations

Thomas Davis 2 collaborations

Micah T McClain 2 collaborations

Eileen K Maziarz 2 collaborations

Armando D Bedoya 2 collaborations

Daniel L Gilstrap 2 collaborations

Jamie L Todd 2 collaborations

Christina E Barkauskas 2 collaborations

Robert Bigelow 2 collaborations

Jeffrey D Leimberger 2 collaborations

Ephraim L Tsalik 2 collaborations

Olivia Wolf 2 collaborations

Mona Mughar 2 collaborations

Daniel S Lupu 2 collaborations

Vance G Fowler 2 collaborations

Thomas L Holland 2 collaborations

Stephen P Bergin 2 collaborations

Fred C Christians 2 collaborations

Marla Lay Vaughn 2 collaborations

Judith C Wilber 2 collaborations

Sarah Y Park 2 collaborations

Lily M Blair 1 collaboration

Zoe A Katsamakis 1 collaboration

Olivia C Smibert 1 collaboration

Alex E Wolfe 1 collaboration

Paul Giardina 1 collaboration

John Slingerland 1 collaboration

Miguel-Angel Perales 1 collaboration

Ying Taur 1 collaboration

Marcel R M van den Brink 1 collaboration

Jonathan U Peled 1 collaboration

Kate A Markey 1 collaboration

Russell G Witt 1 collaboration

Michela Frascoli 1 collaboration

Quoc-Hung Nguyen 1 collaboration

Simona Zompi 1 collaboration

Roberto Romero 1 collaboration

Tippi C Mackenzie 1 collaboration

Haopu Yang 1 collaboration

Nameer S Al-Yousif 1 collaboration

Haris Zia 1 collaboration

Daniel Kotok 1 collaboration

Sudeb Dalai 1 collaboration

Michelle Barron 1 collaboration

Madeleine R Heldman 1 collaboration

Constance Lau 1 collaboration

Simone Thair 1 collaboration

Igor D Vilfan 1 collaboration

Trupti Kawli 1 collaboration

Gregory D Wall 1 collaboration

Anita Cheung 1 collaboration

Zoë N Rogers 1 collaboration

Galit Meshulam-Simon 1 collaboration

Liza Huijse 1 collaboration

Sanjeev Balakrishnan 1 collaboration

James V Quinn 1 collaboration

Mickey Kertesz 1 collaboration

Samuel Yang 1 collaboration

Eliza J Chang 1 collaboration

Nathan Ledeboer 1 collaboration

Kevin Messacar 1 collaboration

Kevin Brick 1 collaboration

Rachid Ounit 1 collaboration

Luis J Noa 1 collaboration

Rabeeya Sabzwari 1 collaboration

Ronald Trible 1 collaboration

Jason C Sniffen 1 collaboration

Prerana Roth 1 collaboration

Amir Khan 1 collaboration

Anamaria Rodriguez 1 collaboration

Syeda Sahra 1 collaboration

Michael J Davis 1 collaboration

Inderjeet S Brar 1 collaboration

Gayathri Balasundaram 1 collaboration

John A Branda 1 collaboration

Jacob E Lemieux 1 collaboration

Klemen Strle 1 collaboration

Nitin S Damle 1 collaboration

Timothy J Lepore 1 collaboration

Nira R Pollock 1 collaboration

Jim Nomura 1 collaboration

Gunter Rieg 1 collaboration

Gary Bluestone 1 collaboration

Townson Tsai 1 collaboration

Andrew Lai 1 collaboration

Dawn Terashita 1 collaboration

Brian P Lee 1 collaboration

Michelle A Barron 1 collaboration

Grace Lisius 1 collaboration

Matthew Hensley 1 collaboration

Nameer Al-Yousif 1 collaboration

Michael Lu 1 collaboration

William Bain 1 collaboration

Faraaz Shah 1 collaboration

Caitlin Schaefer 1 collaboration

Shulin Qin 1 collaboration

Xiaohong Wang 1 collaboration

Yingze Zhang 1 collaboration

Kevin J Mitchell 1 collaboration

Ellen K Hughes 1 collaboration

Jana L Jacobs 1 collaboration

Asma Naqvi 1 collaboration

John W Mellors 1 collaboration

Barbara Methé 1 collaboration

Kristin Jarman 1 collaboration

Aga Zielinska 1 collaboration

Amy L Carr 1 collaboration

Arryn Craney 1 collaboration

Matthew Pike 1 collaboration

John Joseph Farrell 1 collaboration

Sanjeet Dadwal 1 collaboration

James B Wood 1 collaboration

Efrat Matkovich 1 collaboration

Staci McAdams 1 collaboration