Timo Lassmann

Affiliations

Telethon Kids Institute, University of Western Australia, Perth Children's Hospital, Perth, Western Australia, Australia.

Publications (15)

Zika Virus Changes Methylation of Genes Involved in Immune Response and Neural Development in Brazilian Babies Born With Congenital Microcephaly.

The Journal of infectious diseases

Avec: Denise Anderson , João I C F Neri , Cássio R M Souza , Joanna G Valverde , Josélio M G De Araújo , Maria D S B Nascimento , Rebeca C C Branco , Nivia M R Arrais , Timo Lassmann , Jenefer M Blackwell , Selma M B Jeronimo

Kalign 3: multiple sequence alignment of large data sets.

Bioinformatics (Oxford, England)

Avec: Timo Lassmann

Antisense Transcription in Loci Associated to Hereditary Neurodegenerative Diseases.

Molecular neurobiology

Avec: Silvia Zucchelli , Stefania Fedele , Paolo Vatta , Raffaella Calligaris , Peter Heutink , Patrizia Rizzu , Masayoshi Itoh , Francesca Persichetti , Claudio Santoro , Hideya Kawaji , Timo Lassmann , Yoshihide Hayashizaki , Piero Carninci , Alistair R R Forrest , Auteur inconnu , Stefano Gustincich

C1 CAGE detects transcription start sites and enhancer activity at single-cell resolution.

Nature communications

Avec: Tsukasa Kouno , Jonathan Moody , Andrew Tae-Jun Kwon , Youtaro Shibayama , Sachi Kato , Yi Huang , Michael Böttcher , Efthymios Motakis , Mickaël Mendez , Jessica Severin , Joachim Luginbühl , Imad Abugessaisa , Akira Hasegawa , Satoshi Takizawa , Takahiro Arakawa , Masaaki Furuno , Naveen Ramalingam , Jay West , Harukazu Suzuki , Takeya Kasukawa , Timo Lassmann , Chung-Chau Hon , Erik Arner , Piero Carninci , Charles Plessy , Jay W Shin

Reference exome data for a Northern Brazilian population.

Scientific data

Avec: Alexia L Weeks , Richard W Francis , Joao I C F Neri , Nathaly M C Costa , Nivea M R Arrais , Timo Lassmann , Jenefer M Blackwell , Selma M B Jeronimo

Common and Rare Genetic Variants That Could Contribute to Severe Otitis Media in an Australian Aboriginal Population.

Clinical infectious diseases : an official publication of the Infectious Diseases Society of America

Avec: Sarra E Jamieson , Michaela Fakiola , Dave Tang , Elizabeth Scaman , Genevieve Syn , Richard W Francis , Harvey L Coates , Denise Anderson , Timo Lassmann , Heather J Cordell , Jenefer M Blackwell

Characteristics of TCR Repertoire Associated With Successful Immune Checkpoint Therapy Responses.

Frontiers in immunology

Avec: Joel Kidman , Nicola Principe , Mark Watson , Timo Lassmann , Robert A Holt , Anna K Nowak , Willem Joost Lesterhuis , Richard A Lake , Jonathan Chee

CRISPR single base editing, neuronal disease modelling and functional genomics for genetic variant analysis: pipeline validation using Kleefstra syndrome EHMT1 haploinsufficiency.

Stem cell research & therapy

Avec: Vanessa S Fear , Catherine A Forbes , Denise Anderson , Sebastian Rauschert , Genevieve Syn , Nicole Shaw , Sarra Jamieson , Michelle Ward , Gareth Baynam , Timo Lassmann

CRISPR/Cas9 generated PTCHD1 2489T>G stem cells recapitulate patient phenotype when undergoing neural induction.

HGG advances

Avec: Kathryn O Farley , Catherine A Forbes , Nicole C Shaw , Emma Kuzminski , Michelle Ward , Gareth Baynam , Timo Lassmann , Vanessa S Fear

Identification of novel cerebellar developmental transcriptional regulators with motif activity analysis.

BMC genomics

Avec: Thomas J Ha , Peter G Y Zhang , Remi Robert , Joanna Yeung , Douglas J Swanson , Anthony Mathelier , Wyeth W Wasserman , Sujin Im , Masayoshi Itoh , Hideya Kawaji , Timo Lassmann , Carsten O Daub , Erik Arner , Auteur inconnu , Piero Carninci , Yoshihide Hayashizaki , Alistair R R Forrest , Daniel Goldowitz

Comparative transcriptomics of primary cells in vertebrates.

Genome research

Avec: Tanvir Alam , Saumya Agrawal , Jessica Severin , Robert S Young , Robin Andersson , Erik Arner , Akira Hasegawa , Marina Lizio , Jordan A Ramilowski , Imad Abugessaisa , Yuri Ishizu , Shohei Noma , Hiroshi Tarui , Martin S Taylor , Timo Lassmann , Masayoshi Itoh , Takeya Kasukawa , Hideya Kawaji , Luigi Marchionni , Guojun Sheng , Alistair R R Forrest , Levon M Khachigian , Yoshihide Hayashizaki , Piero Carninci , Michiel J L de Hoon

Systematic assessment of tissue dissociation and storage biases in single-cell and single-nucleus RNA-seq workflows.

Genome biology

Avec: Elena Denisenko , Belinda B Guo , Matthew Jones , Rui Hou , Leanne de Kock , Timo Lassmann , Daniel Poppe , Olivier Clément , Rebecca K Simmons , Ryan Lister , Alistair R R Forrest

Temporally restricted activation of IFNβ signaling underlies response to immune checkpoint therapy in mice.

Nature communications

Avec: Rachael M Zemek , Wee Loong Chin , Vanessa S Fear , Ben Wylie , Thomas H Casey , Cath Forbes , Caitlin M Tilsed , Louis Boon , Belinda B Guo , Anthony Bosco , Alistair R R Forrest , Michael J Millward , Anna K Nowak , Richard A Lake , Timo Lassmann , W Joost Lesterhuis

SAMStat 2: quality control for next generation sequencing data.

Bioinformatics (Oxford, England)

Avec: Timo Lassmann

Sensitization to immune checkpoint blockade through activation of a STAT1/NK axis in the tumor microenvironment.

Science translational medicine

Avec: Rachael M Zemek , Emma De Jong , Wee Loong Chin , Iona S Schuster , Vanessa S Fear , Thomas H Casey , Cath Forbes , Sarah J Dart , Connull Leslie , Ayham Zaitouny , Michael Small , Louis Boon , Alistair R R Forrest , Daithi O Muiri , Mariapia A Degli-Esposti , Michael J Millward , Anna K Nowak , Timo Lassmann , Anthony Bosco , Richard A Lake , W Joost Lesterhuis

Réseau de co-auteurs

Alistair R R Forrest 6 collaborations

Piero Carninci 4 collaborations

Vanessa S Fear 4 collaborations

Denise Anderson 3 collaborations

Jenefer M Blackwell 3 collaborations

Masayoshi Itoh 3 collaborations

Hideya Kawaji 3 collaborations

Yoshihide Hayashizaki 3 collaborations

Erik Arner 3 collaborations

Anna K Nowak 3 collaborations

Richard A Lake 3 collaborations

Selma M B Jeronimo 2 collaborations

None None 2 collaborations

Jessica Severin 2 collaborations

Imad Abugessaisa 2 collaborations

Akira Hasegawa 2 collaborations

Takeya Kasukawa 2 collaborations

Richard W Francis 2 collaborations

Genevieve Syn 2 collaborations

Catherine A Forbes 2 collaborations

Michelle Ward 2 collaborations

Gareth Baynam 2 collaborations

Belinda B Guo 2 collaborations

Rachael M Zemek 2 collaborations

Wee Loong Chin 2 collaborations

Thomas H Casey 2 collaborations

Cath Forbes 2 collaborations

Louis Boon 2 collaborations

Anthony Bosco 2 collaborations

Michael J Millward 2 collaborations

W Joost Lesterhuis 2 collaborations

João I C F Neri 1 collaboration

Cássio R M Souza 1 collaboration

Joanna G Valverde 1 collaboration

Josélio M G De Araújo 1 collaboration

Maria D S B Nascimento 1 collaboration

Rebeca C C Branco 1 collaboration

Nivia M R Arrais 1 collaboration

Silvia Zucchelli 1 collaboration

Stefania Fedele 1 collaboration

Paolo Vatta 1 collaboration

Raffaella Calligaris 1 collaboration

Peter Heutink 1 collaboration

Patrizia Rizzu 1 collaboration

Francesca Persichetti 1 collaboration

Claudio Santoro 1 collaboration

Stefano Gustincich 1 collaboration

Tsukasa Kouno 1 collaboration

Jonathan Moody 1 collaboration

Andrew Tae-Jun Kwon 1 collaboration

Youtaro Shibayama 1 collaboration

Sachi Kato 1 collaboration

Yi Huang 1 collaboration

Michael Böttcher 1 collaboration

Efthymios Motakis 1 collaboration

Mickaël Mendez 1 collaboration

Joachim Luginbühl 1 collaboration

Satoshi Takizawa 1 collaboration

Takahiro Arakawa 1 collaboration

Masaaki Furuno 1 collaboration

Naveen Ramalingam 1 collaboration

Jay West 1 collaboration

Harukazu Suzuki 1 collaboration

Chung-Chau Hon 1 collaboration

Charles Plessy 1 collaboration

Jay W Shin 1 collaboration

Alexia L Weeks 1 collaboration

Joao I C F Neri 1 collaboration

Nathaly M C Costa 1 collaboration

Nivea M R Arrais 1 collaboration

Sarra E Jamieson 1 collaboration

Michaela Fakiola 1 collaboration

Dave Tang 1 collaboration

Elizabeth Scaman 1 collaboration

Harvey L Coates 1 collaboration

Heather J Cordell 1 collaboration

Joel Kidman 1 collaboration

Nicola Principe 1 collaboration

Mark Watson 1 collaboration

Robert A Holt 1 collaboration

Willem Joost Lesterhuis 1 collaboration

Jonathan Chee 1 collaboration

Sebastian Rauschert 1 collaboration

Nicole Shaw 1 collaboration

Sarra Jamieson 1 collaboration

Kathryn O Farley 1 collaboration

Nicole C Shaw 1 collaboration

Emma Kuzminski 1 collaboration

Thomas J Ha 1 collaboration

Peter G Y Zhang 1 collaboration

Remi Robert 1 collaboration

Joanna Yeung 1 collaboration

Douglas J Swanson 1 collaboration

Anthony Mathelier 1 collaboration

Wyeth W Wasserman 1 collaboration

Sujin Im 1 collaboration

Carsten O Daub 1 collaboration

Daniel Goldowitz 1 collaboration

Tanvir Alam 1 collaboration

Saumya Agrawal 1 collaboration

Robert S Young 1 collaboration

Robin Andersson 1 collaboration

Marina Lizio 1 collaboration

Jordan A Ramilowski 1 collaboration

Yuri Ishizu 1 collaboration

Shohei Noma 1 collaboration

Hiroshi Tarui 1 collaboration

Martin S Taylor 1 collaboration

Luigi Marchionni 1 collaboration

Guojun Sheng 1 collaboration

Levon M Khachigian 1 collaboration

Michiel J L de Hoon 1 collaboration

Elena Denisenko 1 collaboration

Matthew Jones 1 collaboration

Rui Hou 1 collaboration

Leanne de Kock 1 collaboration

Daniel Poppe 1 collaboration

Olivier Clément 1 collaboration

Rebecca K Simmons 1 collaboration

Ryan Lister 1 collaboration

Ben Wylie 1 collaboration

Caitlin M Tilsed 1 collaboration

Emma De Jong 1 collaboration

Iona S Schuster 1 collaboration

Sarah J Dart 1 collaboration

Connull Leslie 1 collaboration

Ayham Zaitouny 1 collaboration

Michael Small 1 collaboration

Daithi O Muiri 1 collaboration

Mariapia A Degli-Esposti 1 collaboration