Listeria thailandensis sp. nov.
AAI
ANI
POCP
Thailand
chicken
listeria
new taxa
whole genome sequencing
Journal
International journal of systematic and evolutionary microbiology
ISSN: 1466-5034
Titre abrégé: Int J Syst Evol Microbiol
Pays: England
ID NLM: 100899600
Informations de publication
Date de publication:
Jan 2019
Jan 2019
Historique:
pubmed:
21
11
2018
medline:
16
3
2019
entrez:
21
11
2018
Statut:
ppublish
Résumé
During a screening of Listeria species in food samples in Thailand, a Listeria-like bacterium was recovered from fried chicken and could not be assigned to any known species. Phylogenetic analysis based on the 16S rRNA gene and on 243 Listeria core genes placed the novel taxon within the Listeria aquatica, Listeria floridensis, Listeria fleishmannii and Listeria costaricensis clade (Listeria sensu lato), with highest similarity to L. floridensis (98.9 %) and L. costaricensis (98.8 %). Whole-genome sequence analyses based on the average nucleotide blast identity (ANI<86 %), the pairwise amino acid identity (AAI>64 %) and on the percentage of conserved proteins (POCP>77 %) with currently known Listeria species confirmed that the strain constituted a new taxon within the genus Listeria. At the phenotypical level, it differs from other Listeria species by the production of acid from d-tagatose and inositol. The name Listeria thailandensis sp. nov. is proposed for the novel species, and is represented by the type strain CLIP 2015/00305
Identifiants
pubmed: 30457511
doi: 10.1099/ijsem.0.003097
doi:
Substances chimiques
DNA, Bacterial
0
RNA, Ribosomal, 16S
0
Types de publication
Journal Article
Langues
eng
Sous-ensembles de citation
IM