Autosomal recessive congenital ichthyosis: Genomic landscape and phenotypic spectrum in a cohort of 125 consanguineous families.


Journal

Human mutation
ISSN: 1098-1004
Titre abrégé: Hum Mutat
Pays: United States
ID NLM: 9215429

Informations de publication

Date de publication:
03 2019
Historique:
received: 06 07 2018
revised: 31 10 2018
accepted: 13 11 2018
pubmed: 24 12 2018
medline: 24 3 2020
entrez: 23 12 2018
Statut: ppublish

Résumé

Autosomal recessive congenital ichthyosis (ARCI), a phenotypically heterogeneous group of non-syndromic Mendelian disorders of keratinization, is caused by mutations in as many as 13 distinct genes. We examined a cohort of 125 consanguineous families with ARCI for underlying genetic mutations. The patients' DNA was analyzed with a gene-targeted next generation sequencing panel comprising 38 ichthyosis associated genes. The interpretations of results of genomic data were assisted by genome-wide homozygosity mapping and transcriptome sequencing. Sequence data analysis identified biallelic mutations in 106 families out of a total of 125 (85%), most of them (102, 96.2%) being homozygous, reflecting consanguinity in these families. Among the 85 distinct mutations in 10 different genes, 45 (53%) were previously unreported. Phenotype-genotype correlations allowed assignment of specific genes in the majority of the families to a specific subtype of ARCI, lamellar ichthyosis (LI) versus congenital ichthyosiform erythroderma (CIE). Interestingly, mutations in several genes could give rise to an overlapping phenotype consistent with either LI or CIE. Also, this is the third report for SDR9C7 and SULT2B1, and fourth report for CERS3 mutations. Direct comparison of our results with previously published regional cohorts highlights the global mutation landscape of ARCI, however, population specific differences were noted.

Identifiants

pubmed: 30578701
doi: 10.1002/humu.23695
doi:

Substances chimiques

RNA Splice Sites 0

Types de publication

Journal Article

Langues

eng

Sous-ensembles de citation

IM

Pagination

288-298

Informations de copyright

© 2018 Wiley Periodicals, Inc.

Auteurs

Leila Youssefian (L)

Department of Dermatology and Cutaneous Biology, Sidney Kimmel Medical College at Thomas Jefferson University, Philadelphia, PA, USA.
Department of Medical Genetics, School of Medicine, Tehran University of Medical Sciences, Tehran, Iran.
Genetics, Genomics and Cancer Biology PhD Program, Thomas Jefferson University, Philadelphia, PA, USA.

Hassan Vahidnezhad (H)

Department of Dermatology and Cutaneous Biology, Sidney Kimmel Medical College at Thomas Jefferson University, Philadelphia, PA, USA.
Biotechnology Research Center, Department of Molecular Medicine, Pasteur Institute of Iran, Tehran, Iran.

Amir Hossein Saeidian (AH)

Department of Dermatology and Cutaneous Biology, Sidney Kimmel Medical College at Thomas Jefferson University, Philadelphia, PA, USA.
Genetics, Genomics and Cancer Biology PhD Program, Thomas Jefferson University, Philadelphia, PA, USA.

Andrew Touati (A)

Department of Dermatology and Cutaneous Biology, Sidney Kimmel Medical College at Thomas Jefferson University, Philadelphia, PA, USA.
Drexel University College of Medicine, Philadelphia, PA, USA.

Soheila Sotoudeh (S)

Department of Dermatology, Children's Medical Center, Pediatric Center of Excellence, Tehran University of Medical Sciences, Tehran, Iran.

Hamidreza Mahmoudi (H)

Department of Dermatology, Razi Hospital, Tehran University of Medical Sciences, Tehran, Iran.

Parvin Mansouri (P)

Skin and Stem Cell Research Center, Tehran University of Medical Sciences, Tehran, Iran.

Maryam Daneshpazhooh (M)

Department of Dermatology, Razi Hospital, Tehran University of Medical Sciences, Tehran, Iran.

Nessa Aghazadeh (N)

Department of Dermatology, Razi Hospital, Tehran University of Medical Sciences, Tehran, Iran.

Kambiz Kamyab Hesari (KK)

Pathology Department, Razi Hospital, Tehran University of Medical Sciences, Tehran, Iran.

Mohammadreza Basiri (M)

School of Medicine, Shahid Sadoughi University of Medical Sciences and Health Sciences, Yazd, Iran.

Eric Londin (E)

Computational Medicine Center, Sidney Kimmel Cancer Center, Thomas Jefferson University, Philadelphia, PA, USA.

Gaurav Kumar (G)

Sidney Kimmel Cancer Center, Department of Cancer Biology, Thomas Jefferson University, Philadelphia, PA, USA.

Sirous Zeinali (S)

Biotechnology Research Center, Department of Molecular Medicine, Pasteur Institute of Iran, Tehran, Iran.
Kawsar Human Genetics Research Center, Tehran, Iran.

Paolo Fortina (P)

Sidney Kimmel Cancer Center, Department of Cancer Biology, Thomas Jefferson University, Philadelphia, PA, USA.
Department of Molecular Medicine, Sapienza University, Rome, Italy.

Jouni Uitto (J)

Department of Dermatology and Cutaneous Biology, Sidney Kimmel Medical College at Thomas Jefferson University, Philadelphia, PA, USA.
Jefferson Institute of Molecular Medicine, Thomas Jefferson University, Philadelphia, PA, USA.

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Classifications MeSH