Complementing Medical Records with Precalculated Data Items to Facilitate Decision Support and Phenotyping.


Journal

Studies in health technology and informatics
ISSN: 1879-8365
Titre abrégé: Stud Health Technol Inform
Pays: Netherlands
ID NLM: 9214582

Informations de publication

Date de publication:
2019
Historique:
entrez: 4 4 2019
pubmed: 4 4 2019
medline: 31 8 2019
Statut: ppublish

Résumé

The Arden Syntax is a standard for clinical decision support functions in the form of Medical Logic Modules (MLMs). While the data type system of the early versions was limited to flat lists, later versions introduced an object type, supporting complex data structures, even up to entire electronic medical records (EMRs). Such objects are static insofar as their structure cannot be modified at MLM runtime. University Hospital Erlangen uses an experimental Arden Syntax version termed PLAIN, which provides an integrated mapper for arbitrary data structures, including entire EMRs. To facilitate knowledge encoding and reduce MLM complexity, we searched for a way to complement patient records with precalculated data items. We modified the object data type in two ways. The first was to include a statement for the explicit creation of new attributes; the second was to implicitly create an attribute whenever a value is assigned to a previously non-existing attribute. As a proof of concept, we complemented the ventilation section of every accessed EMR with a patient-individual recommendation for the expiratory tidal volume. A means to extend the structure of an object at runtime provides several advantages. The precalculated data items need no longer be calculated by the MLMs themselves, which reduces complexity and facilitates code maintenance. This might be beneficial not only for clinical decision support, but also with respect to the use of Arden Syntax language constructs for phenotyping queries, as well as with respect to the frequently required preprocessing of EMR data.

Identifiants

pubmed: 30942709

Types de publication

Journal Article

Langues

eng

Pagination

36-40

Auteurs

Stefan Kraus (S)

Medical Informatics, University Erlangen-Nürnberg, Erlangen, Germany.

Hans-Ulrich Prokosch (HU)

Medical Informatics, University Erlangen-Nürnberg, Erlangen, Germany.

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