Shovelomics for phenotyping root architectural traits of rapeseed/canola (Brassica napus L.) and genome-wide association mapping.
Brassica napus
GWAS
Marker assisted selection
Root architectural traits
Shovelomics
Journal
Molecular genetics and genomics : MGG
ISSN: 1617-4623
Titre abrégé: Mol Genet Genomics
Pays: Germany
ID NLM: 101093320
Informations de publication
Date de publication:
Aug 2019
Aug 2019
Historique:
received:
19
07
2018
accepted:
03
04
2019
pubmed:
11
4
2019
medline:
30
7
2019
entrez:
11
4
2019
Statut:
ppublish
Résumé
Root system in plants plays an important role in mining moisture and nutrients from the soil and is positively correlated to yield in many crops including rapeseed/canola (Brassica napus L.). Substantial phenotypic diversity in root architectural traits among the B. napus growth types leads to a scope of root system improvement in breeding populations. In this study, 216 diverse genotypes were phenotyped for five different root architectural traits following shovelomics approach in the field condition during 2015 and 2016. A single nucleotide polymorphism (SNP) marker panel consisting of 30,262 SNPs was used to conduct genome-wide association study to detect marker/trait association. A total of 31 significant marker loci were identified at 0.01 percentile tail P value cutoff for different root traits. Six marker loci for soil-level taproot diameter (R
Identifiants
pubmed: 30968249
doi: 10.1007/s00438-019-01563-x
pii: 10.1007/s00438-019-01563-x
doi:
Types de publication
Journal Article
Langues
eng
Pagination
985-1000Références
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