Bacterial arginine kinases have a highly skewed distribution within the proteobacteria.
Arginine kinase
Bacterial arginine kinase
Horizontal gene transfer
Phosphagen kinase
Journal
Comparative biochemistry and physiology. Part B, Biochemistry & molecular biology
ISSN: 1879-1107
Titre abrégé: Comp Biochem Physiol B Biochem Mol Biol
Pays: England
ID NLM: 9516061
Informations de publication
Date de publication:
Jul 2019
Jul 2019
Historique:
received:
20
02
2019
revised:
03
04
2019
accepted:
05
04
2019
pubmed:
14
4
2019
medline:
21
6
2019
entrez:
14
4
2019
Statut:
ppublish
Résumé
Phosphagen kinases (PKs) are known to be distributed throughout the animal kingdom, but have recently been discovered in some protozoan and bacterial species. A recent search of the available bacterial genomes revealed 49 unique sequences that appear to code for an arginine kinase (AK). The distribution of sequences was highly skewed with thirty nine out the forty nine sequences being found in six Proteobacteria classes (α, β, δ, γ, ε, and ζ) which represented 46.6% of the 61,335 bacterial genomes available at JGI-IMG/M website. Moreover, twenty one of the unique and metagenome bAK sequences identified were from δ-Proteobacteria despite these representing only 0.88% of the total genomes available. Phylogenetic analyses revealed that the bacterial AK sequences were interpersed between basal species such as cnidarians, sponges and protozoa, displaying an unstable clustering that was dependent upon the parameters chosen for phylogenetic analysis. Three of these putative bacterial AK genes were cloned into the pET45 expression vector, expressed, and biochemically confirmed to be capable of phosphorylating arginine using ATP. Results of the kinetic analyses of the putative bAKs from Ahrensia, D. autotrophicum, and O. profundus show that the catalytic efficiencies with respect to arginine for each enzyme, measured at 10
Identifiants
pubmed: 30980894
pii: S1096-4959(19)30083-1
doi: 10.1016/j.cbpb.2019.04.001
pii:
doi:
Substances chimiques
Bacterial Proteins
0
Arginine Kinase
EC 2.7.3.3
Types de publication
Journal Article
Langues
eng
Sous-ensembles de citation
IM
Pagination
60-71Informations de copyright
Copyright © 2019 Elsevier Inc. All rights reserved.