Evolution of the human cold/menthol receptor, TRPM8.
Alternative Splicing
/ genetics
Animals
Cell Line, Tumor
Cold Temperature
Evolution, Molecular
Exons
/ genetics
Genetic Variation
HEK293 Cells
Humans
Menthol
/ metabolism
Mice
Open Reading Frames
/ genetics
Phylogeny
Protein Isoforms
/ genetics
RNA, Messenger
/ genetics
TRPM Cation Channels
/ genetics
Alternative transcription
Bioinformatics
Cold and menthol receptor
Evolution
Isoforms
Phylogenetics
Splice variants
Journal
Molecular phylogenetics and evolution
ISSN: 1095-9513
Titre abrégé: Mol Phylogenet Evol
Pays: United States
ID NLM: 9304400
Informations de publication
Date de publication:
07 2019
07 2019
Historique:
received:
31
01
2019
revised:
09
04
2019
accepted:
09
04
2019
pubmed:
14
4
2019
medline:
18
12
2019
entrez:
14
4
2019
Statut:
ppublish
Résumé
Genes showing versatile functions or subjected to fast expansion and contraction during the adaptation of species to specific ecological conditions, like sensory receptors for odors, pheromones and tastes, are characterized by a great plasticity through evolution. One of the most fascinating sensory receptors in the family of TRP channels, the cold and menthol receptor TRPM8, has received significant attention in the literature. Recent studies have reported the existence of TRPM8 channel isoforms encoded by alternative mRNAs transcribed from alternative promoters and processed by alternative splicing. Since the first draft of the human genome was accomplished in 2000, alternative transcription, alternative splicing and alternative translation have appeared as major sources of gene product diversity and are thought to participate in the generation of complexity in higher organisms. In this study, we investigate whether alternative transcription has been a driving force in the evolution of the human forms of the cold receptor TRPM8. We identified 33 TRPM8 alternative mRNAs (24 new sequences) and their associated protein isoforms in human tissues. Using comparative genomics, we described the evolution of the human TRPM8 sequences in eight ancestors since the origin of Amniota, and estimated in which ancestors the new TRPM8 variants originated. In order to validate the estimated origins of this receptor, we performed experimental validations of predicted exons in mouse tissues. Our results suggest a first diversification event of the cold receptor in the Boreoeutheria ancestor, and a subsequent divergence at the origin of Simiiformes.
Identifiants
pubmed: 30980935
pii: S1055-7903(19)30079-X
doi: 10.1016/j.ympev.2019.04.011
pii:
doi:
Substances chimiques
Protein Isoforms
0
RNA, Messenger
0
TRPM Cation Channels
0
TRPM8 protein, human
0
TRPM8 protein, mouse
0
Menthol
1490-04-6
Types de publication
Journal Article
Research Support, Non-U.S. Gov't
Langues
eng
Sous-ensembles de citation
IM
Pagination
104-118Informations de copyright
Copyright © 2019 Elsevier Inc. All rights reserved.