Domain selective labeling for NMR studies of multidomain proteins by domain ligation using highly active sortase A.


Journal

Biochimica et biophysica acta. General subjects
ISSN: 1872-8006
Titre abrégé: Biochim Biophys Acta Gen Subj
Pays: Netherlands
ID NLM: 101731726

Informations de publication

Date de publication:
02 2020
Historique:
received: 19 06 2019
revised: 14 08 2019
accepted: 21 08 2019
pubmed: 27 8 2019
medline: 14 7 2020
entrez: 27 8 2019
Statut: ppublish

Résumé

Structural study of multidomain proteins using NMR is an emerging issue for understanding biological functions. To this end, domain-specific labeling is expected to be a key technology for facilitating the NMR-assignment process and for collecting distance information via spin labeling. To obtain domain-specific labeled samples, use of sortase A as a protein ligation tool is a viable approach. Sortase A enables ligation of separately expressed proteins (domains) through the Leu-Pro-X-Thr-Gly linker. However, the ligation reaction mediated by sortase A is not efficient. Poor yield and long reaction times hamper large-scale preparation using sortase A. Here we report the application of highly active sortases to NMR analyses. Optimal yields can be achieved within several hours when the ligation reaction are mediated by highly active sortases at 4 °C. We propose that this protocol can contribute to structural analyses of multidomain proteins by NMR.

Identifiants

pubmed: 31449838
pii: S0304-4165(19)30205-3
doi: 10.1016/j.bbagen.2019.129419
pii:
doi:

Substances chimiques

Bacterial Proteins 0
Peptides 0
Vinculin 125361-02-6
Aminoacyltransferases EC 2.3.2.-
sortase A EC 2.3.2.-
Cysteine Endopeptidases EC 3.4.22.-

Types de publication

Journal Article Research Support, Non-U.S. Gov't

Langues

eng

Sous-ensembles de citation

IM

Pagination

129419

Informations de copyright

Copyright © 2019. Published by Elsevier B.V.

Auteurs

Takahiro Aizu (T)

Department of Chemistry, Graduate School of Science, Tokyo Metropolitan University, 1-1 Minamiosawa, Hachioji 192-0397, Japan.

Takumi Suzuki (T)

Department of Chemistry, Graduate School of Science, Tokyo Metropolitan University, 1-1 Minamiosawa, Hachioji 192-0397, Japan.

Akihiro Kido (A)

Department of Chemistry, Graduate School of Science, Tokyo Metropolitan University, 1-1 Minamiosawa, Hachioji 192-0397, Japan.

Kan Nagai (K)

Department of Chemistry, Graduate School of Science, Tokyo Metropolitan University, 1-1 Minamiosawa, Hachioji 192-0397, Japan.

Ayaho Kobayashi (A)

Department of Chemistry, Graduate School of Science, Tokyo Metropolitan University, 1-1 Minamiosawa, Hachioji 192-0397, Japan.

Reiko Sugiura (R)

Laboratory of Molecular Pharmacogenomics, Department of Pharmaceutical Sciences, Faculty of Pharmacy, Kindai University, 3-4-1 Kowake, Higashi-Osaka 577-8502, Japan.

Yutaka Ito (Y)

Department of Chemistry, Graduate School of Science, Tokyo Metropolitan University, 1-1 Minamiosawa, Hachioji 192-0397, Japan.

Masaki Mishima (M)

Department of Chemistry, Graduate School of Science, Tokyo Metropolitan University, 1-1 Minamiosawa, Hachioji 192-0397, Japan. Electronic address: mishima-masaki@tmu.ac.jp.

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Classifications MeSH