Isolation and functional characterization of three abiotic stress-inducible (Apx, Dhn and Hsc70) promoters from pearl millet (Pennisetum glaucum L.).
Ascorbate Peroxidases
/ genetics
Droughts
Gene Expression Regulation, Plant
/ genetics
Heat-Shock Proteins
/ genetics
Hot Temperature
Pennisetum
/ genetics
Plant Proteins
/ genetics
Plants, Genetically Modified
/ genetics
Promoter Regions, Genetic
/ genetics
Salinity
Salt Tolerance
/ genetics
Seedlings
/ metabolism
Sodium Chloride
/ metabolism
Stress, Physiological
/ genetics
Nicotiana
/ genetics
Abiotic stress-inducible promoters
Cis-acting elements
Pearl millet
PgApx pro
PgDhn pro
PgHsc70 pro
Journal
Molecular biology reports
ISSN: 1573-4978
Titre abrégé: Mol Biol Rep
Pays: Netherlands
ID NLM: 0403234
Informations de publication
Date de publication:
Dec 2019
Dec 2019
Historique:
received:
04
05
2019
accepted:
20
08
2019
pubmed:
31
8
2019
medline:
19
5
2020
entrez:
31
8
2019
Statut:
ppublish
Résumé
Pearl millet is a C
Identifiants
pubmed: 31468258
doi: 10.1007/s11033-019-05039-4
pii: 10.1007/s11033-019-05039-4
doi:
Substances chimiques
Heat-Shock Proteins
0
Plant Proteins
0
dehydrin proteins, plant
134711-03-8
Sodium Chloride
451W47IQ8X
Ascorbate Peroxidases
EC 1.11.1.11
Types de publication
Journal Article
Langues
eng
Sous-ensembles de citation
IM
Pagination
6039-6052Subventions
Organisme : Department of Science and Technology, Government of India
ID : IFA11-LSPA-06
Références
Grayson M (2013) Agriculture and drought. Nature 501:S1. https://doi.org/10.1038/501S1a
doi: 10.1038/501S1a
pubmed: 24067757
Christensen JH, Christensen OB (2007) A summary of the PRUDENCE model projections of changes in European climate by the end of this century. Clim Chang 81:7–30
Cramer GR, Urano K, Delrot S, Pezzotti M, Shinozaki K (2011) Effects of abiotic stress on plants: a systems biology perspective. BMC Plant Biol 11:163
pubmed: 22094046
pmcid: 3252258
Krasensky J, Jonak C (2012) Drought, salt, and temperature stress-induced metabolic rearrangements and regulatory networks. J Exp Bot 63:1593–1608
pubmed: 22291134
pmcid: 4359903
Mishra RN, Reddy PS, Nair S, Markandeya G, Reddy AR, Sopory SK, Reddy MK (2007) Isolation and characterization of expressed sequence tags (ESTs) from subtracted cDNA libraries of Pennisetum glaucum seedlings. Plant Mol Biol 64:713–732
pubmed: 17558562
Yamaguchi-Shinozaki K, Shinozaki K (2006) Transcriptional regulatory networks in cellular responses and tolerance to dehydration and cold stresses. Annu Rev Plant Biol 57:781–803
pubmed: 16669782
Morozova O, Marra MA (2008) Applications of next-generation sequencing technologies in functional genomics. Genomics 92:255–264
pubmed: 18703132
Schuster SC (2007) Next-generation sequencing transforms today’s biology. Nat Methods 5:16
pubmed: 18165802
Hirt H, Shinozaki K (2003) Plant responses to abiotic stress. Springer Science, Berlin
Apel K, Hirt H (2004) Reactive oxygen species: metabolism, oxidative stress, and signal transduction. Annu Rev Plant Biol 55:373–399
pubmed: 15377225
Bihmidine S, Lin J, Stone JM, Awada T, Specht JE, Clemente TE (2013) Activity of the Arabidopsis RD29A and RD29B promoter elements in soybean under water stress. Planta 237:55–64
pubmed: 22983672
Mur LA, Sturgess FJ, Farrell GG, Draper J (2004) The AoPR10 promoter and certain endogenous PR10 genes respond to oxidative signals in Arabidopsis. Mol Plant Pathol 5:435–451
pubmed: 20565619
Srivastava VK, Raikwar S, Tuteja N (2014) Cloning and functional characterization of the promoter of PsSEOF1 gene from Pisum sativum under different stress conditions using Agrobacterium-mediated transient assay. Plant Signal Behav 9(9):e29626
pubmed: 25763698
pmcid: 4205139
Rerksiri W, Zhang X, Xiong H, Chen X (2013) Expression and promoter analysis of six heat stress-inducible genes in rice. Sci W J. https://doi.org/10.1155/2013/397401
doi: 10.1155/2013/397401
Chakravarthi M, Syamaladevi DP, Harunipriya P, Augustine SM, Subramonian N (2016) A novel PR10 promoter from Erianthus arundinaceus directs high constitutive transgene expression and is enhanced upon wounding in heterologous plant systems. Mol Biol Rep 43:17–30
pubmed: 26671655
Hou J, Jiang P, Qi S, Zhang K, He Q, Xu C, Li K (2016) Isolation and functional validation of salinity and osmotic stress inducible promoter from the maize type-II H + - pyrophosphatase gene by deletion analysis in transgenic tobacco plants. PLoS ONE 11:e0154041
pubmed: 27101137
pmcid: 4839719
Bhuria M, Goel P, Kumar S, Singh AK (2016) The promoter of AtUSP is co-regulated by phytohormones and abiotic stresses in Arabidopsis thaliana. Front Plant Sci 7:1957
pubmed: 28083000
pmcid: 5183650
Pellegrineschi A, Reynolds M, Pacheco M, Brito RM, Almeraya R, Yamaguchi- Shinozaki K, Hoisington D (2004) Stress-induced expression in wheat of the Arabidopsis thaliana DREB1A gene delays water stress symptoms under greenhouse conditions. Genome 47:493–500
pubmed: 15190366
Nakashima K, Tran LSP, Van Nguyen D, Fujita M, Maruyama K, Todaka D, Yamaguchi- Shinozaki K (2007) Functional analysis of a NAC type transcription factor OsNAC6 involved in abiotic and biotic stress responsive gene expression in rice. Plant J 51:617–630
pubmed: 17587305
Li F, Han Y, Feng Y, Xing S, Zhao M, Chen Y, Wang W (2013) Expression of wheat expansin driven by the RD29 promoter in tobacco confers water-stress tolerance without impacting growth and development. J Biotechnol 163:281–291
pubmed: 23183383
Shafi A, Pal AK, Sharma V, Kalia S, Kumar S, Ahuja PS, Singh AK (2017) Transgenic potato plants overexpressing SOD and APX exhibit enhanced lignification and starch biosynthesis with improved salt stress tolerance. Plant Mol Biol Rep 35:504–518
Wang Y, Wisniewski M, Meilan R, Cui M, Webb R, Fuchigami L (2005) Overexpression of cytosolic ascorbate peroxidase in tomato confers tolerance to chilling and salt stress. J Am Soc Hortic Sci 130:167–173
Wang Y, Wisniewski M, Meilan R, Cui M, Fuchigami L (2006) Transgenic tomato (Lycopersicon esculentum) overexpressing cAPX exhibits enhanced tolerance to UV-B and heat stress. J Appl Hort 8:87–90
Yabuta Y, Motoki T, Yoshimura K, Takeda T, Ishikawa T, Shigeoka S (2002) Thylakoid membrane-bound ascorbate peroxidase is a limiting factor of antioxidative systems under photo-oxidative stress. Plant J 32:915–925
pubmed: 12492834
Sato Y, Masuta Y, Saito K, Murayama S, Ozawa K (2011) Enhanced chilling tolerance at the booting stage in rice by transgenic overexpression of the ascorbate peroxidase gene, OsAPXa. Plant Cell Rep 30:399–406
pubmed: 21203887
Ishikawa T, Morimoto Y, Madhusudhan R, Sawa Y, Shibata H, Yabuta Y, Shigeoka S (2005) Acclimation to diverse environmental stresses caused by a suppression of cytosolic ascorbate peroxidase in tobacco BY-2 cells. Plant Cell Physiol 46:1264–1271
pubmed: 15919670
Sun WH, Duan M, Li F, Shu DF, Yang S, Meng QW (2010) Overexpression of tomato tAPX gene in tobacco improves tolerance to high or low temperature stress. Biol Plant 54:614–620
Graether SP, Boddington KF (2014) Disorder and function: a review of the dehydrin protein family. Front Plant Sci 5:576
pubmed: 25400646
pmcid: 4215689
Singh J, Reddy PS, Reddy CS, Reddy MK (2015) Molecular cloning and characterization of salt inducible dehydrin gene from the C4 plant Pennisetum glaucum. Plant Gene 4:55–63
Nagaraju M, Reddy PS, Kumar SA, Kumar A, Suravajhala P, Ali A, Rao DM (2018) Genome-wide in silico analysis of dehydrins in Sorghum bicolor, Setaria italica and Zea mays and quantitative analysis of dehydrin gene expressions under abiotic stresses in Sorghum bicolor. Plant Gene 13:64–75
Peng Y, Reyes JL, Wei H, Yang Y, Karlson D, Covarrubias AA, Arora R (2008) RcDhn5, a cold acclimation-responsive dehydrin from Rhododendron catawbiense rescues enzyme activity from dehydration effects in vitro and enhances freezing tolerance in RcDhn5 overexpressing Arabidopsis plants. Physiol Plant 134:583–597
pubmed: 19000195
Ganguly M, Datta K, Roychoudhury A, Gayen D, Sengupta DN, Datta SK (2012) Overexpression of Rab16A gene in indica rice variety for generating enhanced salt tolerance. Plant Signal Behav 7:502–509
pubmed: 22499169
pmcid: 3419040
Cheng WH, Endo A, Zhou L, Penney J, Chen HC, Arroyo A, Koshiba T (2002) A unique short-chain dehydrogenase/reductase in Arabidopsis glucose signaling and abscisic acid biosynthesis and functions. Plant Cell 14:2723–2743
pubmed: 12417697
pmcid: 152723
Brini F, Hanin M, Lumbreras V, Amara I, Khoudi H, Hassairi A, Masmoudi K (2007) Overexpression of wheat dehydrin DHN-5 enhances tolerance to salt and osmotic stress in Arabidopsis thaliana. Plant Cell Rep 26:2017–2026
pubmed: 17641860
Roy Choudhury A, Roy C, Sengupta DN (2007) Transgenic tobacco plants overexpressing the heterologous lea gene Rab16A from rice during high salt and water deficit display enhanced tolerance to salinity stress. Plant Cell Rep 26:1839–1859
Reddy PS, Mallikarjuna G, Kaul T, Chakradhar T, Mishra RN, Sopory SK, Reddy MK (2010) Molecular cloning and characterization of gene encoding for cytoplasmic Hsc70 from Pennisetum glaucum may play a protective role against abiotic stresses. Mol Genet Genomics 283:243–254
pubmed: 20127116
Reddy PS, Kishor PBK, Seiler C, Kuhlmann M, Eschen-Lippold L, Lee J, Sreenivasulu N (2014) Unraveling regulation of the small heat shock proteins by the heat shock factor HvHsfB2c in barley: its implications in drought stress response and seed development. PLoS ONE 9(3):e89125
pubmed: 24594978
pmcid: 3942355
Reddy PS, Sharma KK, Vadez V, Reddy MK (2015) Molecular cloning and differential expression of cytosolic class I small Hsp gene family in Pennisetum glaucum (L.). Appl Biochem Biotechnol 176:598–612
pubmed: 25855236
Reddy PS, Chakradhar T, Reddy RA, Nitnavare RB, Mahanty S, Reddy MK (2016) Role of heat shock proteins in improving heat stress tolerance in crop plants. Heat shock proteins and plants. Springer, Cham, pp 283–307
Nitnavare RB, Yeshvekar RK, Sharma KK, Vadez V, Reddy MK, Reddy PS (2016) Molecular cloning, characterization and expression analysis of a heat shock protein 10 (Hsp10) from Pennisetum glaucum (L.), a C4 cereal plant from the semi-arid tropics. Mol Biol Rep 43:861–870
pubmed: 27206926
Wang Y, Lin S, Song Q, Li K, Tao H, Huang J, He H (2014) Genome-wide identification of heat shock proteins (Hsps) and Hsp interactors in rice: Hsp70 s as a case study. BMC Genomics 15:344
pubmed: 24884676
pmcid: 4035072
Zhang XP, Glaser E (2002) Interaction of plant mitochondrial and chloroplast signal peptides with the Hsp70 molecular chaperone. Trends Plant Sci 7:14–21
pubmed: 11804822
Hartl FU, Hayer-Hartl M (2002) Molecular chaperones in the cytosol: from nascent chain to folded protein. Science 295:1852–1858
pubmed: 11884745
Mirus O (1803) Schleiff E (2009) The evolution of tetratricopeptide repeat domain containing receptors involved in protein translocation-Review. Endocytobiosis Cell Res 10:1115–1130
Yu A, Yu A, Li P, Tang T, Wang J, Chen Y, Liu L (2015) Roles of Hsp70 s in stress responses of microorganisms, plants, and animals. BioMed Res Int. https://doi.org/10.1155/2015/510319
doi: 10.1155/2015/510319
pubmed: 26798632
pmcid: 4700161
Reddy PS, Mahanty S, Kaul T, Nair S, Sopory SK, Reddy MK (2008) A high-throughput genome-walking method and its use for cloning unknown flanking sequences. Anal Biochem 381:248–253
pubmed: 18674512
Lescot M, Déhais P, Thijs G, Marchal K, Moreau Y, Van de Peer Y, Rombauts S (2002) PlantCARE, a database of plant cis-acting regulatory elements and a portal to tools for in silico analysis of promoter sequences. Nucleic Acids Res 30:325–327
pubmed: 11752327
pmcid: 99092
Chang WC, Lee TY, Huang HD, Huang HY, Pan RL (2008) PlantPAN: plant promoter analysis navigator, for identifying combinatorial cis-regulatory elements with distance constraint in plant gene groups. BMC Genomics 9:561
pubmed: 19036138
pmcid: 2633311
Horsch RB, Fry J, Hoffmann N, Neidermeyer J, Rogers SG, Fraley RT (1989) Leaf disc transformation. Plant molecular biology manual. Springer, Dordrecht, pp 63–71
Jefferson RA, Kavanagh TA, Bevan MW (1987) GUS fusions: beta-glucuronidase as a sensitive and versatile gene fusion marker in higher plants. EMBO J 6:3901–3907
pubmed: 3327686
pmcid: 553867
Schmidt GW, Delaney SK (2010) Stable internal reference genes for normalization of real-time RT-PCR in tobacco (Nicotiana tabacum) during development and abiotic stress. Mol Genet Genomics 283:233–241
pubmed: 20098998
Vijayalakshmi T, Varalaxmi Y, Jainender S, Yadav SK, Vanaja M, Jyothilakshmi N, Maheswari M (2012) Physiological and biochemical basis of water-deficit stress tolerance in pearl millet hybrid and parents. Am J Plant Sci 3(12):1730
Pan J, Li Z, Wang Q, Garrell AK, Liu M, Guan Y, Liu W (2018) Comparative proteomic investigation of drought responses in foxtail millet. BMC Plant Biol 18(1):315
pubmed: 30497407
pmcid: 6267058
Hasanuzzaman M, Nahar K, Alam M, Roychowdhury R, Fujita M (2013) Physiological, biochemical, and molecular mechanisms of heat stress tolerance in plants. Int J Mol Sci 14(5):9643–9684
pubmed: 23644891
pmcid: 3676804
Reddy RA, Kumar B, Reddy PS, Mishra RN, Mahanty S, Kaul T, Reddy MK (2009) Molecular cloning and characterization of genes encoding Pennisetum glaucum ascorbate peroxidase and heat-shock factor: interlinking oxidative and heat-stress responses. J Plant Physiol 166:1646–1659
pubmed: 19450902
Tóth SZ, Nagy V, Puthur JT, Kovács L, Garab G (2011) The physiological role of ascorbate as photosystem II electron donor: protection against photo inactivation in heat- stressed leaves. Plant Physiol 156(1):382–392
pubmed: 21357184
pmcid: 3091034
Ortner V, Ludwig A, Riegel E, Dunzinger S, Czerny T (2015) An artificial HSE promoter for efficient and selective detection of heat shock pathway activity. Cell Stress Chaperones 20:277–288
pubmed: 25168173
Sato Y, Murakami T, Funatsuki H, Matsuba S, Saruyama H, Tanida M (2001) Heat shock-mediated APX gene expression and protection against chilling injury in rice seedlings. J Exp Bot 52:145–151
pubmed: 11181723
Yang Y, He M, Zhu Z, Li S, Xu Y, Zhang C, Wang Y (2012) Identification of the dehydrin gene family from grapevine species and analysis of their responsiveness to various forms of abiotic and biotic stress. BMC Plant Biol 12:140
pubmed: 22882870
pmcid: 3460772
Hu WH, Song XS, Shi K, Xia XJ, Zhou YH, Yu JQ (2008) Changes in electron transport, superoxide dismutase and ascorbate peroxidase isoenzymes in chloroplasts and mitochondria of cucumber leaves as influenced by chilling. Photosynthetica 46:581
Gill SS, Tuteja N (2010) Reactive oxygen species and antioxidant machinery in abiotic stress tolerance in crop plants. Plant Physiol Biochem 48:909–930
pubmed: 20870416
Shafi A, Dogra V, Gill T, Ahuja PS, Sreenivasulu Y (2014) Simultaneous over- expression of PaSOD and RaAPX in transgenic Arabidopsis thaliana confers cold stress tolerance through increase in vascular lignifications. PLoS ONE 9:e110302
pubmed: 25330211
pmcid: 4201527
Halder T, Upadhyaya G, Basak C, Das A, Chakraborty C, Ray S (2018) Dehydrins impart protection against oxidative stress in transgenic tobacco plants. Front Plant Sci 9:136
pubmed: 29491874
pmcid: 5817096
Lu Z, Liu D, Liu S (2007) Two rice cytosolic ascorbate peroxidases differentially improve salt tolerance in transgenic Arabidopsis. Plant Cell Rep 26:1909–1917
pubmed: 17571267
Wisniewski ME, Bassett CL, Renaut J, JrR Farrell, Tworkoski T, Artlip TS (2006) Differential regulation of two dehydrin genes from peach (Prunus persica) by photoperiod, low temperature and water deficit. Tree Physiol 26:575–584
pubmed: 16452071