Plasmid Typing and Classification.

Alleles Bacterial Typing Techniques Humans Molecular Typing Multilocus Sequence Typing Phylogeny Plasmids / classification Polymerase Chain Reaction
Bacterial typing DPMT Incompatibility group PBRT pMLST

Journal

Methods in molecular biology (Clifton, N.J.)
ISSN: 1940-6029
Titre abrégé: Methods Mol Biol
Pays: United States
ID NLM: 9214969

Informations de publication

Date de publication:
2020
Historique:
entrez: 5 10 2019
pubmed: 5 10 2019
medline: 5 1 2021
Statut: ppublish

Résumé

Plasmids identification and classification is an essential parameter in current bacterial typing. The most widely used PCR-based methods are the PCR-based replicon typing (PBRT) and the degenerate primer MOB typing (DPMT). PBRT targets the replicons on the plasmids and DPMT targets the relaxase genes. A finer resolution of phylogenetic relatedness can be obtained by plasmid multiLocus sequence typing available for the major plasmid types occurring in Enterobacteriaceae.

Identifiants

DOI: 10.1007/978-1-4939-9877-7_22 PMID: 31584172
pubmed: 31584172
doi: 10.1007/978-1-4939-9877-7_22
doi:

Types de publication

Journal Article

Langues

eng

Sous-ensembles de citation

IM

Pagination

309-321

Auteurs

Laura Villa (L)

Department of Infectious Diseases, Istituto Superiore di Sanità, Rome, Italy.

Alessandra Carattoli (A)

Department of Molecular Medicine, Sapienza University of Rome, Rome, Italy. alessandra.carattoli@uniroma1.it.

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Classifications MeSH

questionsmedicales.fr › Phénomènes génétiques › Structures génétiques › Génome › Composants de génome › Gènes › Allèles › Plasmid Typing and Classification.
questionsmedicales.fr › Techniques d'investigation › Techniques de laboratoire clinique › Techniques microbiologiques › Techniques bactériologiques › Techniques de typage bactérien › Plasmid Typing and Classification.
questionsmedicales.fr › Eucaryotes › Animaux › Chordés › Vertébrés › Mammifères › Eutheria › Primates › Haplorhini › Catarrhini › Hominidae › Humains › Plasmid Typing and Classification.
questionsmedicales.fr › Techniques d'investigation › Techniques génétiques › Typage moléculaire › Plasmid Typing and Classification.
questionsmedicales.fr › Techniques d'investigation › Techniques génétiques › Analyse de séquence › Analyse de séquence d'ADN › Typage par séquençage multilocus › Plasmid Typing and Classification.
questionsmedicales.fr › Sciences de l'information › Phylogenèse › Plasmid Typing and Classification.
questionsmedicales.fr › Phénomènes génétiques › Structures génétiques › Plasmides › Plasmid Typing and Classification.
questionsmedicales.fr › Techniques d'investigation › Techniques génétiques › Techniques d'amplification d'acides nucléiques › Réaction de polymérisation en chaîne › Plasmid Typing and Classification.