Surface plasmon resonance imaging coupled to on-chip mass spectrometry: a new tool to probe protein-GAG interactions.


Journal

Analytical and bioanalytical chemistry
ISSN: 1618-2650
Titre abrégé: Anal Bioanal Chem
Pays: Germany
ID NLM: 101134327

Informations de publication

Date de publication:
Jan 2020
Historique:
received: 09 09 2019
accepted: 08 11 2019
revised: 11 10 2019
pubmed: 7 12 2019
medline: 18 2 2020
entrez: 7 12 2019
Statut: ppublish

Résumé

A biosensor device for the detection and characterization of protein-glycosaminoglycan interactions is being actively sought and constitutes the key to identifying specific carbohydrate ligands, an important issue in glycoscience. Mass spectrometry (MS) hyphenated methods are promising approaches for carbohydrate enrichment and subsequent structural characterization. In the study herein, we report the analysis of interactions between the glycosaminoglycans (GAGs) heparin (HP) and heparan sulfate (HS) and various cytokines by coupling surface plasmon resonance imaging (SPRi) for thermodynamic analysis method and MALDI-TOF MS for structural determination. To do so, we developed an SPR biochip in a microarray format and functionalized it with a self-assembled monolayer of short poly(ethylene oxide) chains for grafting the human cytokines stromal cell-derived factor-1 (SDF-1α), monocyte chemotactic protein-1 (MCP-1), and interferon-γ. The thermodynamic parameters of the interactions between these cytokines and unfractionated HP/HS and derived oligosaccharides were successively determined using SPRi monitoring, and the identification of the captured carbohydrates was carried out directly on the biochip surface using MALDI-TOF MS, revealing cytokine preferential affinity for GAGs. The MS identification was enhanced by on-chip digestion of the cytokine-bound GAGs with heparinase, leading to the detection of oligosaccharides likely involved in the binding sequence of GAG ligands. Although several carbohydrate array-based assays have been reported, this study is the first report of the successful analysis of protein-GAG interactions using SPRi-MS coupling.

Identifiants

pubmed: 31807804
doi: 10.1007/s00216-019-02267-2
pii: 10.1007/s00216-019-02267-2
doi:

Substances chimiques

Glycosaminoglycans 0
Ligands 0
Proteins 0

Types de publication

Journal Article

Langues

eng

Sous-ensembles de citation

IM

Pagination

507-519

Auteurs

Cédric Przybylski (C)

Laboratoire Analyse et Modélisation pour la Biologie et l'Environnement, LAMBE, Université Paris-Saclay, CNRS, CEA, Univ Evry, Evry, France. cedric.przybylski@sorbonne-universite.fr.
Institut Parisien de Chimie Moléculaire, IPCM, Sorbonne Université, CNRS, 4 Place Jussieu, 75252, Paris Cedex 05, France. cedric.przybylski@sorbonne-universite.fr.

Florence Gonnet (F)

Laboratoire Analyse et Modélisation pour la Biologie et l'Environnement, LAMBE, Université Paris-Saclay, CNRS, CEA, Univ Evry, Evry, France.

Els Saesen (E)

Institut de Biologie Structurale, Université Grenoble Alpes, CNRS, CEA, 38000, Grenoble, France.

Hugues Lortat-Jacob (H)

Institut de Biologie Structurale, Université Grenoble Alpes, CNRS, CEA, 38000, Grenoble, France.

Régis Daniel (R)

Laboratoire Analyse et Modélisation pour la Biologie et l'Environnement, LAMBE, Université Paris-Saclay, CNRS, CEA, Univ Evry, Evry, France. regis.daniel@univ-evry.fr.

Articles similaires

Databases, Protein Protein Domains Protein Folding Proteins Deep Learning

High-throughput Bronchus-on-a-Chip system for modeling the human bronchus.

Akina Mori, Marjolein Vermeer, Lenie J van den Broek et al.
1.00
Humans Bronchi Lab-On-A-Chip Devices Epithelial Cells Goblet Cells

Conservation of the cooling agent binding pocket within the TRPM subfamily.

Kate Huffer, Matthew C S Denley, Elisabeth V Oskoui et al.
1.00
TRPM Cation Channels Animals Binding Sites Mice Pyrimidinones
Fucosyltransferases Drug Repositioning Molecular Docking Simulation Molecular Dynamics Simulation Humans

Classifications MeSH