The clinical significance and potential molecular mechanism of integrin subunit beta 4 in laryngeal squamous cell carcinoma.
Carcinoma, Squamous Cell
/ genetics
Female
Gene Expression Regulation, Neoplastic
Gene Ontology
Humans
Immunohistochemistry
Integrin beta4
/ genetics
Laryngeal Neoplasms
/ genetics
Larynx
/ pathology
Male
Microarray Analysis
Middle Aged
Protein Interaction Mapping
Sequence Analysis, RNA
Signal Transduction
Immunohistochemistry
Integrin subunit beta 4
Larynx
Microarray
RNA-sequencing
Squamous cell carcinoma
Journal
Pathology, research and practice
ISSN: 1618-0631
Titre abrégé: Pathol Res Pract
Pays: Germany
ID NLM: 7806109
Informations de publication
Date de publication:
Feb 2020
Feb 2020
Historique:
received:
07
10
2019
revised:
21
11
2019
accepted:
10
12
2019
pubmed:
1
1
2020
medline:
16
12
2020
entrez:
1
1
2020
Statut:
ppublish
Résumé
The relationship between integrin beta 4 (ITGB4) expression and laryngeal squamous cell carcinoma (LSCC) remains unclarified. The object of the present study was to explore the clinical significance and potential molecular mechanism of ITGB4 in LSCC. The protein level of ITGB4 was significantly higher in 46 LSCC patients than in 26 non-LSCC tissues detected by in-house immunohistochemistry. Consistently, ITGB4 mRNA level was also greatly upregulated based on microarray and RNA-seq data (standard mean difference, SMD = 1.62, 95 % CI: 1.23-2.00). And the area under curves (AUC) of summary receiver operator characteristic (SROC) was 0.87 (95 % CI: 0.84-0.90) based on 172 cases of LSCC and 59 cases of non-cancerous controls. Ninety genes were intersected by the ITGB4 related genes and LSCC differential expressed genes (DEGs) from all available microarray and RNA-seq datasets. Based on Gene Ontology (GO) analysis, the top terms of biological process (BP), cellular component (CC) and molecular function (MF) for the 90 ITGB4 related DEGs were extracellular matrix organization, basement membrane and extracellular matrix structural constituent, respectively. The Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway enrichment analysis showed that ITGB4 related DEGs mainly participated in the pathways of ECM-receptor interaction, Focal adhesion and Small cell lung cancer. Moreover, the Protein-Protein Interaction (PPI) network indicated that ITGA3, ITGA5, ITGB4, MET, LAMA3, and COL4A1 might be the core genes of LSCC development related to ITGB4. In conclusion, high ITGB4 expression may lead to the occurrence and development of LSCC via various signaling pathways.
Identifiants
pubmed: 31889588
pii: S0344-0338(19)32173-9
doi: 10.1016/j.prp.2019.152785
pii:
doi:
Substances chimiques
ITGB4 protein, human
0
Integrin beta4
0
Types de publication
Journal Article
Langues
eng
Sous-ensembles de citation
IM
Pagination
152785Informations de copyright
Copyright © 2019 Elsevier GmbH. All rights reserved.
Déclaration de conflit d'intérêts
Declaration of Competing Interest None.