Graph Theory Analysis of Functional Connectivity Combined with Machine Learning Approaches Demonstrates Widespread Network Differences and Predicts Clinical Variables in Temporal Lobe Epilepsy.
graph theory
machine learning
neural networks
neurocognitive variable
resting-state fMRI
Journal
Brain connectivity
ISSN: 2158-0022
Titre abrégé: Brain Connect
Pays: United States
ID NLM: 101550313
Informations de publication
Date de publication:
02 2020
02 2020
Historique:
pubmed:
28
1
2020
medline:
25
8
2020
entrez:
28
1
2020
Statut:
ppublish
Résumé
Understanding how global brain networks are affected in epilepsy may elucidate the pathogenesis of seizures and its accompanying neurobehavioral comorbidities. We investigated functional changes within neural networks in temporal lobe epilepsy (TLE) using graph theory analysis of resting-state connectivity. Twenty-seven TLE presurgical patients (age 41.0 ± 12.3 years) and 85 age, gender, and handedness equivalent healthy controls (HCs; age 39.7 ± 16.9 years) were enrolled. Eyes-closed resting-state functional magnetic resonance image scans were analyzed to compare network properties and functional connectivity (FC) changes. TLE subjects showed significantly higher global efficiency, lower clustering coefficient ratio, and lower shortest path lengths ratio than HCs, as an indication of a more synchronized, yet less segregated network. A trend of functional reorganization with a shift of network hubs to the contralateral hemisphere was noted in TLE subjects. Support vector machine (SVM) with linear kernel was trained to separate between neural networks in TLE and HC subjects based on graph measurements. SVM analysis allowed separation between TLE and HC networks with 80.66% accuracy using eight features of graph measurements. Support vector regression (SVR) was used to predict neurocognitive performance from graph metrics. An SVR linear predictor showed discriminative prediction accuracy for four key neurocognitive variables in TLE (absolute
Identifiants
pubmed: 31984759
doi: 10.1089/brain.2019.0702
pmc: PMC7044761
doi:
Types de publication
Journal Article
Research Support, N.I.H., Extramural
Langues
eng
Sous-ensembles de citation
IM
Pagination
39-50Subventions
Organisme : NCI NIH HHS
ID : T32 CA009206
Pays : United States
Organisme : NINDS NIH HHS
ID : R01 NS105646
Pays : United States
Références
PLoS One. 2010 Oct 28;5(10):e13701
pubmed: 21060892
Cereb Cortex. 2011 Sep;21(9):2147-57
pubmed: 21330467
Proc Natl Acad Sci U S A. 2012 Dec 11;109(50):20608-13
pubmed: 23185007
Brain. 2006 Jul;129(Pt 7):1917-28
pubmed: 16760199
Nat Rev Neurosci. 2009 Mar;10(3):186-98
pubmed: 19190637
PLoS One. 2008 Apr 30;3(4):e0002051
pubmed: 18446219
Epilepsy Behav. 2009 Aug;15(4):445-51
pubmed: 19560403
Neurology. 2010 Jun 1;74(22):1776-84
pubmed: 20513813
Epilepsia. 2005 Mar;46(3):420-30
pubmed: 15730540
Neuroimage. 2015 Sep;118:219-30
pubmed: 26054876
Neurology. 2017 Jun 13;88(24):2285-2293
pubmed: 28515267
Hum Brain Mapp. 2015 May;36(5):1637-47
pubmed: 25704244
Neuroimage. 2008 Aug 15;42(2):515-24
pubmed: 18554926
Nature. 1998 Jun 4;393(6684):440-2
pubmed: 9623998
Ann Neurol. 2005 Feb;57(2):188-96
pubmed: 15562425
Cereb Cortex. 2004 May;14(5):511-20
pubmed: 15054067
Proc Natl Acad Sci U S A. 2002 Jun 11;99(12):7821-6
pubmed: 12060727
Neuroinformatics. 2004;2(2):145-62
pubmed: 15319512
Neuroimage. 2002 Jan;15(1):273-89
pubmed: 11771995
Brain Connect. 2014 Nov;4(9):662-76
pubmed: 25183440
Philos Trans R Soc Lond B Biol Sci. 2014 Oct 5;369(1653):
pubmed: 25180301
PLoS One. 2014 Mar 04;9(3):e90068
pubmed: 24594874
Lancet. 2012 Sep 29;380(9848):1180-92
pubmed: 23021287
PLoS One. 2016 May 12;11(5):e0154660
pubmed: 27171178
Front Neurosci. 2018 May 29;12:353
pubmed: 29896082
Front Syst Neurosci. 2010 Oct 08;4:147
pubmed: 21031030
Cereb Cortex. 2018 Sep 1;28(9):3095-3114
pubmed: 28981612
Neuroreport. 2005 May 31;16(8):791-4
pubmed: 15891571
Neuroimage Clin. 2015 Sep 18;9:458-66
pubmed: 26594628
IEEE Trans Med Imaging. 1999 Jan;18(1):32-42
pubmed: 10193695
Comput Biomed Res. 1996 Jun;29(3):162-73
pubmed: 8812068
Epilepsia. 2016 Oct;57(10):1546-1557
pubmed: 27554793
Neuroimage. 2010 Sep;52(3):1059-69
pubmed: 19819337
Neuroimage. 2006 Sep;32(3):1070-9
pubmed: 16872843
J Neurol Neurosurg Psychiatry. 2007 Mar;78(3):286-94
pubmed: 17012334
Front Comput Neurosci. 2013 Jul 12;7:93
pubmed: 23874288
Proc Natl Acad Sci U S A. 2010 May 4;107(18):8452-6
pubmed: 20404184
PLoS One. 2009;4(4):e5226
pubmed: 19381298
Lancet Neurol. 2008 Jun;7(6):525-37
pubmed: 18485316
PLoS Comput Biol. 2007 Feb 2;3(2):e17
pubmed: 17274684
Epilepsy Res Treat. 2012;2012:201651
pubmed: 22934162
PLoS One. 2010 Jan 08;5(1):e8525
pubmed: 20072616
Nat Rev Neurosci. 2012 Apr 13;13(5):336-49
pubmed: 22498897
Cereb Cortex. 2007 Oct;17(10):2407-19
pubmed: 17204824
MAGMA. 2010 Dec;23(5-6):409-21
pubmed: 20349109
Epilepsia. 1992 Mar-Apr;33(2):289-97
pubmed: 1547758
World Neurosurg. 2016 May;89:78-83
pubmed: 26875655
Neurology. 2002 May 28;58(10):1505-12
pubmed: 12034787