Iron deficiency leads to repression of a non-canonical methionine salvage pathway in Schizosaccharomyces pombe.
Iron
fission yeast
iron economy
metabolic response
methionine salvage pathway
yeast physiology
Journal
Molecular microbiology
ISSN: 1365-2958
Titre abrégé: Mol Microbiol
Pays: England
ID NLM: 8712028
Informations de publication
Date de publication:
07 2020
07 2020
Historique:
received:
24
01
2020
revised:
19
02
2020
accepted:
19
02
2020
pubmed:
25
2
2020
medline:
28
4
2021
entrez:
25
2
2020
Statut:
ppublish
Résumé
The methionine salvage pathway (MSP) regenerates methionine from 5'-methylthioadenosine (MTA). Aerobic MSP consists of six enzymatic steps. The mug14
Substances chimiques
Deoxyadenosines
0
Polyamines
0
Thionucleosides
0
5'-methylthioadenosine
634Z2VK3UQ
Methionine
AE28F7PNPL
Iron
E1UOL152H7
Types de publication
Journal Article
Research Support, Non-U.S. Gov't
Langues
eng
Sous-ensembles de citation
IM
Pagination
46-65Informations de copyright
© 2020 John Wiley & Sons Ltd.
Références
Albers, E. (2009) Metabolic characteristics and importance of the universal methionine salvage pathway recycling methionine from 5′-methylthioadenosine. IUBMB Life, 61(12), 1132-1142. https://doi.org/10.1002/iub.278.
Avila, M.A., Garcia-Trevijano, E.R., Lu, S.C., Corrales, F.J. and Mato, J.M. (2004) Methylthioadenosine. International Journal Biochemistry & Cell Biology, 36(11), 2125-2130. https://doi.org/10.1016/j.biocel.2003.11.016.
Bae, D.H., Lane, D.J.R., Jansson, P.J. and Richardson, D.R. (2018) The old and new biochemistry of polyamines. Biochimica et Biophysica Acta, 1862(9), 2053-2068. https://doi.org/10.1016/j.bbagen.2018.06.004.
Bahler, J., Schuchert, P., Grimm, C. and Kohli, J. (1991) Synchronized meiosis and recombination in fission yeast: observations with pat1-114 diploid cells. Current Genetics, 19(6), 445-451. https://doi.org/10.1007/bf00312735.
Bahler, J., Wu, J.Q., Longtine, M.S., Shah, N.G., McKenzie, A. 3rd, Steever, A.B., et al. (1998) Heterologous modules for efficient and versatile PCR-based gene targeting in Schizosaccharomyces pombe. Yeast, 14(10), 943-951. https://doi.org/10.1002/(SICI)1097-0061(199807)14:10<943:AID-YEA292>3.0.CO;2-Y.
Beaudoin, J., Ioannoni, R., Lopez-Maury, L., Bahler, J., Ait-Mohand, S., Guérin, B., et al. (2011) Mfc1 is a novel forespore membrane copper transporter in meiotic and sporulating cells. Journal of Biological Chemistry, 286(39), 34356-34372. https://doi.org/10.1074/jbc.M111.280396.
Beaudoin, J., Laliberté, J. and Labbé, S. (2006) Functional dissection of Ctr4 and Ctr5 amino-terminal regions reveals motifs with redundant roles in copper transport. Microbiology, 152(Pt 1), 209-222. https://doi.org/10.1099/mic.0.28392-0.
Brachmann, C.B., Davies, A., Cost, G.J., Caputo, E., Li, J., Hieter, P., et al. (1998) Designer deletion strains derived from Saccharomyces cerevisiae S288C: a useful set of strains and plasmids for PCR-mediated gene disruption and other applications. Yeast, 14, 115-132. https://doi.org/10.1002/(SICI)1097-0061(19980130)14:2<115:AID-YEA204>3.0.CO:2-2.
Brault, A., Mourer, T. and Labbé, S. (2015) Molecular basis of the regulation of iron homeostasis in fission and filamentous yeasts. IUBMB Life, 67(11), 801-815. https://doi.org/10.1002/iub.1441.
Brault, A., Rallis, C., Normant, V., Garant, J. M., Bahler, J. and Labbé, S. (2016) Php4 is a key player for iron economy in meiotic and sporulating cells. G3, 6(10), 3077-3095. https://doi.org/10.1534/g3.116.031898.
Brawley, J.V. and Ferro, A.J. (1979) Polyamine biosynthesis during germination of yeast ascospores. Journal Bacteriology, 140(2), 649-654.
Chattopadhyay, M.K., Tabor, C.W. and Tabor, H. (2002) Absolute requirement of spermidine for growth and cell cycle progression of fission yeast (Schizosaccharomyces pombe). Proceedings of the National Academy of Sciences of the United States of America, 99(16), 10330-10334. https://doi.org/10.1073/pnas.162362899.
Chattopadhyay, M.K., Tabor, C.W. and Tabor, H. (2003) Spermidine but not spermine is essential for hypusine biosynthesis and growth in Saccharomyces cerevisiae: spermine is converted to spermidine in vivo by the FMS1-amine oxidase. Proceedings of the National Academy of Sciences of the United States of America, 100(24), 13869-13874. https://doi.org/10.1073/pnas.1835918100.
Chen, D., Toone, W.M., Mata, J., Lyne, R., Burns, G., Kivinen, K., et al. (2003) Global transcriptional responses of fission yeast to environmental stress. Molecular Biology of the Cell, 14(1), 214-229. https://doi.org/10.1091/mbc.E02-08-0499.
Cohn, M.S., Tabor, C.W. and Tabor, H. (1978) Isolation and characterization of Saccharomyces cerevisiae mutants deficient in S-adenosylmethionine decarboxylase, spermidine, and spermine. Journal Bacteriology, 134(1), 208-213.
Cottarel, G., Beach, D. and Deuschle, U. (1993) Two new multi-purpose multicopy Schizosaccharomyces pombe shuttle vectors, pSP1 and pSP2. Current Genetics, 23(5-6), 547-548.
Deshpande, A.R., Pochapsky, T.C. and Ringe, D. (2017) The metal drives the chemistry: dual functions of acireductone dioxygenase. Chemical Reviews, 117(15), 10474-10501. https://doi.org/10.1021/acs.chemrev.7b00117.
Doll, E., Molnar, M., Cuanoud, G., Octobre, G., Latypov, V., Ludin, K., et al. (2008) Cohesin and recombination proteins influence the G1-to-S transition in azygotic meiosis in Schizosaccharomyces pombe. Genetics, 180(2), 727-740. https://doi.org/10.1534/genetics.108.092619.
Foiani, M., Marini, F., Gamba, D., Lucchini, G. and Plevani, P. (1994) The B subunit of the DNA polymerase alpha-primase complex in Saccharomyces cerevisiae executes an essential function at the initial stage of DNA replication. Molecular and Cellular Biology, 14(2), 923-933. https://doi.org/10.1128/mcb.14.2.923.
Forsburg, S.L. and Rhind, N. (2006) Basic methods for fission yeast. Yeast, 23(3), 173-183. https://doi.org/10.1002/yea.1347.
Galaris, D., Barbouti, A. and Pantopoulos, K. (2019) Iron homeostasis and oxidative stress: an intimate relationship. Biochimica et Biophysica Acta, 1866(12), 118535. https://doi.org/10.1016/j.bbamcr.2019.118535.
Gevrekci, A.O. (2017) Fission yeast srm1 is involved in stress response and cell cycle. Current Microbiology, 74(6), 725-731. https://doi.org/10.1007/s00284-017-1241-y.
Gutteridge, J.M.C. and Halliwell, B. (2018) Oxidative stress, redox stress or redox success? Biochemical Biophysical Research Communication, 502(2), 183-186. https://doi.org/10.1016/j.bbrc.2018.05.045.
Harigaya, Y., Tanaka, H., Yamanaka, S., Tanaka, K., Watanabe, Y., Tsutsumi, C., et al. (2006) Selective elimination of messenger RNA prevents an incidence of untimely meiosis. Nature, 442(7098), 45-50. https://doi.org/10.1038/nature04881.
Ioannoni, R., Beaudoin, J., Lopez-Maury, L., Codlin, S., Bahler, J. and Labbé, S. (2012) Cuf2 is a novel meiosis-specific regulatory factor of meiosis maturation. PLoS ONE, 7(4), e36338. https://doi.org/10.1371/journal.pone.0036338.
Ioannoni, R., Beaudoin, J., Mercier, A. and Labbé, S. (2010) Copper-dependent trafficking of the Ctr4-Ctr5 copper transporting complex. PLoS ONE, 5(8), e11964. https://doi.org/10.1371/journal.pone.0011964.
Jacques, J. F., Mercier, A., Brault, A., Mourer, T. and Labbé, S. (2014) Fra2 is a co-regulator of Fep1 inhibition in response to iron starvation. PLoS One, 9(6), e98959. https://doi.org/10.1371/journal.pone.0098959.
Keeney, J.B. and Boeke, J.D. (1994) Efficient targeted integration at leu1-32 and ura4-294 in Schizosaccharomyces pombe. Genetics, 136(3), 849-856.
Laliberté, J., Whitson, L. J., Beaudoin, J., Holloway, S. P., Hart, P. J. and Labbé, S. (2004) The Schizosaccharomyces pombe Pccs protein functions in both copper trafficking and metal detoxification pathways. Journal of Biological Chemistry, 279(27), 28744-28755. https://doi.org/10.1074/jbc.M403426200.
Lane, D.J.R., Bae, D.H., Siafakas, A.R., Suryo-Rahmanto, Y., Al-Akra, L., Jansson, P.J., et al. (2018) Coupling of the polyamine and iron metabolism pathways in the regulation of proliferation: mechanistic links to alterations in key polyamine biosynthetic and catabolic enzymes. Biochimica et Biophysica Acta, 1864(9PtB), 2793-2813. https://doi.org/10.1016/j.bbadis.2018.05.007.
Larochelle, M., Lemay, J. F. and Bachand, F. (2012) The THO complex cooperates with the nuclear RNA surveillance machinery to control small nucleolar RNA expression. Nucleic Acids Research, 40(20), 10240-10253. https://doi.org/10.1093/nar/gks838.
Mercier, A. and Labbé, S. (2009) Both Php4 function and subcellular localization are regulated by iron via a multistep mechanism involving the glutaredoxin Grx4 and the exportin Crm1. Journal of Biological Chemistry, 284(30), 20249-20262. https://doi.org/10.1074/jbc.M109.009563.
Mercier, A. and Labbé, S. (2010) Iron-dependent remodeling of fungal metabolic pathways associated with ferrichrome biosynthesis. Applied and Environmental Microbiology, 76(12), 3806-3817. https://doi.org/10.1128/AEM.00659-10.
Mercier, A., Pelletier, B. and Labbé, S. (2006) A transcription factor cascade involving Fep1 and the CCAAT-binding factor Php4 regulates gene expression in response to iron deficiency in the fission yeast Schizosaccharomyces pombe. Eukaryotic Cell, 5(11), 1866-1881. https://doi.org/10.1128/EC.00199-06.
Mercier, A., Watt, S., Bahler, J. and Labbé, S. (2008) Key function for the CCAAT-binding factor Php4 to regulate gene expression in response to iron deficiency in fission yeast. Eukaryotic Cell, 7(3), 493-508. https://doi.org/10.1128/EC.00446-07.
Mourer, T., Brault, A. and Labbé, S. (2019) Heme acquisition by Shu1 requires Nbr1 and proteins of the ESCRT complex in Schizosaccharomyces pombe. Molecular Microbiology, 112(5), 1499-1518. https://doi.org/10.1111/mmi.14374.
Mumberg, D., Muller, R. and Funk, M. (1995) Yeast vectors for the controlled expression of heterologous proteins in different genetic backgrounds. Gene, 156(1), 119-122. https://doi.org/10.1016/0378-1119(95)00037-7.
Parveen, N. and Cornell, K.A. (2011) Methylthioadenosine/S-adenosylhomocysteine nucleosidase, a critical enzyme for bacterial metabolism. Molecular Microbiology, 79(1), 7-20. https://doi.org/10.1111/j.1365-2958.2010.07455.x.
Philpott, C. C., Leidgens, S. and Frey, A. G. (2012) Metabolic remodeling in iron-deficient fungi. Biochimica et Biophysica Acta, 1823(9), 1509-1520. https://doi.org/10.1016/j.bbamcr.2012.01.012.
Pirkov, I., Norbeck, J., Gustafsson, L. and Albers, E. (2008) A complete inventory of all enzymes in the eukaryotic methionine salvage pathway. FEBS Journal, 275(16), 4111-4120. https://doi.org/10.1111/j.1742-4658.2008.06552.x.
Plante, S. and Labbé, S. (2019) Spore germination requires ferrichrome biosynthesis and the siderophore transporter Str1 in Schizosaccharomyces pombe. Genetics, 211(3), 893-911. https://doi.org/10.1534/genetics.118.301843.
Plante, S., Normant, V., Ramos-Torres, K.M. and Labbé, S. (2017) Cell-surface copper transporters and superoxide dismutase 1 are essential for outgrowth during fungal spore germination. Journal of Biological Chemistry, 292(28), 11896-11914. https://doi.org/10.1074/jbc.M117.794677.
Sabatinos, S.A. and Forsburg, S.L. (2010) Molecular genetics of Schizosaccharomyces pombe. Methods in Enzymology, 470, 759-795. https://doi.org/10.1016/S0076-6879(10)70032-X.
Sauter, M., Lorbiecke, R., Ouyang, B., Pochapsky, T.C. and Rzewuski, G. (2005) The immediate-early ethylene response gene OsARD1 encodes an acireductone dioxygenase involved in recycling of the ethylene precursor S-adenosylmethionine. Plant Journal, 44(5), 718-729. https://doi.org/10.1111/j.1365-313X.2005.02564.x.
Sherman, F. (2002) Getting started with yeast. Methods Enzymology, 350, 3-41. https://doi.org/10.1016/s0076-6879(02)50954-x.
Siam, R., Dolan, W.P. and Forsburg, S.L. (2004) Choosing and using Schizosaccharomyces pombe plasmids. Methods, 33(3), 189-198. https://doi.org/10.1016/j.ymeth.2003.11.013.
Ucisik-Akkaya, E., Leatherwood, J.K. and Neiman, A.M. (2014) A genome-wide screen for sporulation-defective mutants in Schizosaccharomyces pombe. G3, 4(6), 1173-1182. https://doi.org/10.1534/g3.114.011049.
Valdes-Santiago, L. and Ruiz-Herrera, J. (2013) Stress and polyamine metabolism in fungi. Frontiers in Chemistry, 1, 42. https://doi.org/10.3389/fchem.2013.00042.
Witham, K.L., Minchin, R.F. and Butcher, N.J. (2017) Role for human arylamine N-acetyltransferase 1 in the methionine salvage pathway. Biochemical Pharmacology, 125, 93-100. https://doi.org/10.1016/j.bcp.2016.11.015.
Winzeler, E.A., Shoemaker, D.D., Astromoff, A., Liang, H., Anderson, K., Andre, B., et al. (1999) Functional characterization of the S. cerevisiae genome by gene deletion and parallel analysis. Science, 285(5429), 901-906. https://doi.org/10.1126/science.285.5429.901.
Zhang, M.M., Wu, P.Y., Kelly, F.D., Nurse, P. and Hang, H.C. (2013) Quantitative control of protein S-palmitoylation regulates meiotic entry in fission yeast. PLoS Biology, 11(7), e1001597. https://doi.org/10.1371/journal.pbio.1001597.