Collaborative, Multidisciplinary Evaluation of Cancer Variants Through Virtual Molecular Tumor Boards Informs Local Clinical Practices.


Journal

JCO clinical cancer informatics
ISSN: 2473-4276
Titre abrégé: JCO Clin Cancer Inform
Pays: United States
ID NLM: 101708809

Informations de publication

Date de publication:
07 2020
Historique:
entrez: 10 7 2020
pubmed: 10 7 2020
medline: 1 9 2021
Statut: ppublish

Résumé

The cancer research community is constantly evolving to better understand tumor biology, disease etiology, risk stratification, and pathways to novel treatments. Yet the clinical cancer genomics field has been hindered by redundant efforts to meaningfully collect and interpret disparate data types from multiple high-throughput modalities and integrate into clinical care processes. Bespoke data models, knowledgebases, and one-off customized resources for data analysis often lack adequate governance and quality control needed for these resources to be clinical grade. Many informatics efforts focused on genomic interpretation resources for neoplasms are underway to support data collection, deposition, curation, harmonization, integration, and analytics to support case review and treatment planning. In this review, we evaluate and summarize the landscape of available tools, resources, and evidence used in the evaluation of somatic and germline tumor variants within the context of molecular tumor boards. Molecular tumor boards (MTBs) are collaborative efforts of multidisciplinary cancer experts equipped with genomic interpretation resources to aid in the delivery of accurate and timely clinical interpretations of complex genomic results for each patient, within an institution or hospital network. Virtual MTBs (VMTBs) provide an online forum for collaborative governance, provenance, and information sharing between experts outside a given hospital network with the potential to enhance MTB discussions. Knowledge sharing in VMTBs and communication with guideline-developing organizations can lead to progress evidenced by data harmonization across resources, crowd-sourced and expert-curated genomic assertions, and a more informed and explainable usage of artificial intelligence. Advances in cancer genomics interpretation aid in better patient and disease classification, more streamlined identification of relevant literature, and a more thorough review of available treatments and predicted patient outcomes.

Identifiants

pubmed: 32644817
doi: 10.1200/CCI.19.00169
pmc: PMC7397775
doi:

Types de publication

Journal Article Research Support, N.I.H., Extramural Research Support, Non-U.S. Gov't Review

Langues

eng

Sous-ensembles de citation

IM

Pagination

602-613

Subventions

Organisme : NHGRI NIH HHS
ID : K99 HG010157
Pays : United States
Organisme : NCI NIH HHS
ID : U01 CA209936
Pays : United States
Organisme : NCI NIH HHS
ID : P30 CA008748
Pays : United States
Organisme : NHGRI NIH HHS
ID : R00 HG007940
Pays : United States
Organisme : NCI NIH HHS
ID : U24 CA237719
Pays : United States
Organisme : NHGRI NIH HHS
ID : U24 HG009650
Pays : United States
Organisme : NHGRI NIH HHS
ID : U41 HG009650
Pays : United States

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Auteurs

Shruti Rao (S)

Innovation Center for Biomedical Informatics, Georgetown University Medical Center, Washington, DC.

Beth Pitel (B)

Division of Laboratory Genetics and Genomics, Department of Laboratory Medicine and Pathology, Mayo Clinic, Rochester, MN.

Alex H Wagner (AH)

McDonnell Genome Institute and Department of Medicine, Washington University School of Medicine, St Louis, MO.

Simina M Boca (SM)

Innovation Center for Biomedical Informatics, Georgetown University Medical Center, Washington, DC.

Matthew McCoy (M)

Innovation Center for Biomedical Informatics, Georgetown University Medical Center, Washington, DC.

Ian King (I)

Laboratory Medicine Program, University Health Network and Department of Laboratory Medicine and Pathobiology, University of Toronto, Toronto, Ontario, Canada.

Samir Gupta (S)

Innovation Center for Biomedical Informatics, Georgetown University Medical Center, Washington, DC.

Ben Ho Park (BH)

Division of Hematology and Oncology, Department of Medicine, Vanderbilt-Ingram Cancer Center, Vanderbilt University Medical Center, Nashville, TN.

Jeremy L Warner (JL)

Departments of Medicine and Biomedical Informatics, Vanderbilt-Ingram Cancer Center, Vanderbilt University Medical Center, Nashville, TN.

James Chen (J)

Division of Medical Oncology, Department of Biomedical Informatics, The Ohio State University, Columbus, OH.

Peter K Rogan (PK)

Departments of Biochemistry and Oncology, Schulich School of Medicine and Dentistry, University of Western Ontario, London, Ontario, Canada.

Debyani Chakravarty (D)

Kravis Center of Molecular Oncology, Department of Pathology, Memorial Sloan Kettering Cancer Center, New York, NY.

Malachi Griffith (M)

McDonnell Genome Institute and Department of Medicine, Washington University School of Medicine, St Louis, MO.

Obi L Griffith (OL)

McDonnell Genome Institute and Department of Medicine, Washington University School of Medicine, St Louis, MO.

Subha Madhavan (S)

Innovation Center for Biomedical Informatics, Georgetown University Medical Center, Washington, DC.

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