The Wheat GENIE3 Network Provides Biologically-Relevant Information in Polyploid Wheat.
GENIE3
Gene networks
Polyploidy
RNA-Seq
Senescence
Wheat
Journal
G3 (Bethesda, Md.)
ISSN: 2160-1836
Titre abrégé: G3 (Bethesda)
Pays: England
ID NLM: 101566598
Informations de publication
Date de publication:
05 10 2020
05 10 2020
Historique:
pubmed:
5
8
2020
medline:
22
6
2021
entrez:
5
8
2020
Statut:
epublish
Résumé
Gene regulatory networks are powerful tools which facilitate hypothesis generation and candidate gene discovery. However, the extent to which the network predictions are biologically relevant is often unclear. Recently a GENIE3 network which predicted targets of wheat transcription factors was produced. Here we used an independent RNA-Seq dataset to test the predictions of the wheat GENIE3 network for the senescence-regulating transcription factor
Identifiants
pubmed: 32747342
pii: g3.120.401436
doi: 10.1534/g3.120.401436
pmc: PMC7534433
doi:
Substances chimiques
Transcription Factors
0
Types de publication
Journal Article
Research Support, Non-U.S. Gov't
Langues
eng
Sous-ensembles de citation
IM
Pagination
3675-3686Subventions
Organisme : Biotechnology and Biological Sciences Research Council
ID : BB/P016855/1
Pays : United Kingdom
Organisme : Biotechnology and Biological Sciences Research Council
ID : BB/P013511/1
Pays : United Kingdom
Informations de copyright
Copyright © 2020 Harrington et al.
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