How new molecular tools can help bugbusters: a Burkholderia cepacia complex outbreak investigation.


Journal

Revista do Instituto de Medicina Tropical de Sao Paulo
ISSN: 1678-9946
Titre abrégé: Rev Inst Med Trop Sao Paulo
Pays: Brazil
ID NLM: 7507484

Informations de publication

Date de publication:
2020
Historique:
received: 16 05 2020
accepted: 06 08 2020
entrez: 3 9 2020
pubmed: 3 9 2020
medline: 9 9 2020
Statut: ppublish

Résumé

An outbreak of bloodstream infection (BSI) caused by members of the Burkholderia cepacia complex (Bcc) took place from March 2012 until April 2014 involving thirteen patients. To describe an outbreak investigation of BSI Bcc and showing how genetic sequencing tools contributed to confirm the hypothesis of extrinsic contamination proposed by an observational study. The Infection Control Department revised and reinforced good practices of infusion therapy and catheter care, visits to affected wards, a case control study, and environmental screening based on the case-control findings. Data from the case-control study found an association of cases with central venous catheter (OR 1.36; CI 1.15-1.67) and intravenous cisatracurium use (OR 10.75; CI 1.67-68.89). Visits to the operatory block revealed problems related to the cold chain used for the preservation of thermolabile cisatracurium. We could not retrieve Bcc from environmental samples using classic microbiology. New samples from the same surfaces were obtained for genetic sequencing. Bcc was identified in the cooler box, refrigerator and reusable ice packages. Environmental screening using genetic sequencing proved to be a useful tool for confirming our hypothesis of extrinsic contamination raised by the case-control study.

Identifiants

pubmed: 32876297
pii: S0036-46652020000100228
doi: 10.1590/s1678-9946202062059
pmc: PMC7458077
pii:
doi:

Types de publication

Journal Article Observational Study

Langues

eng

Sous-ensembles de citation

IM

Pagination

e59

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Auteurs

Amanda Luiz Pires Maciel (ALP)

Serviço de Controle de Infecção Hospitalar, Hospital Alemão Oswaldo Cruz, São Paulo, São Paulo, Brazil.

Cristiane Schmitt (C)

Serviço de Controle de Infecção Hospitalar, Hospital Alemão Oswaldo Cruz, São Paulo, São Paulo, Brazil.

Marcia Maria Baraldi (MM)

Serviço de Controle de Infecção Hospitalar, Hospital Alemão Oswaldo Cruz, São Paulo, São Paulo, Brazil.

Caio de Lima Silva (CL)

Serviço de Controle de Infecção Hospitalar, Hospital Alemão Oswaldo Cruz, São Paulo, São Paulo, Brazil.

Luiz Felipe Valter de Oliveira (LFV)

Neoprospecta Microbiome Technologies, Florianópolis, Santa Catarina, Brazil.

Jorge Luiz Mello Sampaio (JLM)

Seção de Microbiologia, Fleury Medicina e Saúde, São Paulo, São Paulo, Brazil.

Rogerio Ferreira Lourenço (RF)

Departamento de Genética, Evolução, Microbiologia e Imunologia, Instituto de Biologia, Universidade de Campinas, Campinas, São Paulo, Brazil.

Anna Sara Levin (AS)

Departamento de Moléstias Infecciosas e Parasitárias, Faculdade de Medicina, Universidade de São Paulo, São Paulo, São Paulo, Brazil.

Icaro Boszczowski (I)

Serviço de Controle de Infecção Hospitalar, Hospital Alemão Oswaldo Cruz, São Paulo, São Paulo, Brazil.

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Classifications MeSH