Halarcobacter arenosus sp. nov., isolated from marine sediment.
Campylobacteraceae
Halarcobacter arenosus
Sea sediment
Taxonomy
Journal
Archives of microbiology
ISSN: 1432-072X
Titre abrégé: Arch Microbiol
Pays: Germany
ID NLM: 0410427
Informations de publication
Date de publication:
Mar 2021
Mar 2021
Historique:
received:
05
03
2020
accepted:
01
10
2020
revised:
01
09
2020
pubmed:
16
10
2020
medline:
5
3
2021
entrez:
15
10
2020
Statut:
ppublish
Résumé
A Gram-stain-negative, slightly curved, rod-shaped bacterial strain CAU 1517
Identifiants
pubmed: 33057911
doi: 10.1007/s00203-020-02075-8
pii: 10.1007/s00203-020-02075-8
doi:
Substances chimiques
RNA, Ribosomal, 16S
0
Types de publication
Journal Article
Langues
eng
Sous-ensembles de citation
IM
Pagination
817-822Subventions
Organisme : National Institute of Biological Resources
ID : NIBR201902203
Organisme : Chung-Ang University
ID : 2019
Références
Cappuccino JG, Sherman N (2002) Microbiology: a laboratory manual, 6th edn. Benjamin/Cummings, Menlo Park
Felsenstein J (1981) Evolutionary trees from DNA sequences: a maximum likelihood approach. J Mol Evol 17:368–376
doi: 10.1007/BF01734359
Goris J, Konstantinidis KT, Klappenbach JA, Coenye T, Vandamme P, Tiedje JM (2007) DNA–DNA hybridization values and their relationship to whole-genome sequence similarities. Int J Syst Evol Microbiol 57:81–91
doi: 10.1099/ijs.0.64483-0
Jyothsna TS, Rahul K, Ramaprasad EVV, Sasikala C, Ramana CV (2013) Arcobacter anaerophilus sp. nov., isolated from an estuarine sediment and emended description of the genus Arcobacter. Int J Syst Evol Microbiol 63:4619–4625
doi: 10.1099/ijs.0.054155-0
Kim JH, Kanjanasuntree R, Kim DH, Lee JS, Sukhoom A, Kantachote D, Kim W (2019) Arenibacillus arenosus gen. nov., sp. nov., a member of the family Rhodobacteraceae isolated from sea sand. Int J Syst Evol Microbiol 69:153–158
doi: 10.1099/ijsem.0.003121
Komagata K, Suzuki KI (1988) 4 Lipid and cell-wall analysis in bacterial systematics. Methods Microbiol 19:161–207
doi: 10.1016/S0580-9517(08)70410-0
Larkin MA, Blackshields G, Brown NP, Chenn R, McGettigan PA, McWilliam H, Valentin F, Wallace IM, Wilm A, Lopez R, Thompson JD, Gibson TJ, Higgins DG (2007) Clustal W and Clustal X version 2.0. Bioinformatics 23:2947–2948
doi: 10.1093/bioinformatics/btm404
Levican A, Collado L, Aguilar C, Yustes C, Diéguez AL, Romalde JL, Figueras MJ (2012) Arcobacter bivalviorum sp. nov. and Arcobacter venerupis sp. nov., new species isolated from shellfish. Syst Appl Microbiol 35:133–138
doi: 10.1016/j.syapm.2012.01.002
Levican A, Rubio-Arcos S, Martinez-Murcia A, Collado L, Figueras MJ (2015) Arcobacter ebronensis sp. nov. and Arcobacter aquimarinus sp. nov., two new species isolated from marine environment. Syst Appl Microbiol 38:30–35
doi: 10.1016/j.syapm.2014.10.011
Minnikin DE, Odonnell AG, Goodfellow M, Alderson G, Athalye M, Schaal A, Parlett JH (1984) An integrated procedure for the extraction of bacterial isoprenoid quinones and polar lipids. J Microbiol Methods 2:233–241
doi: 10.1016/0167-7012(84)90018-6
Nam SW, Kim W, Chun J, Goodfellow M (2004) Tsukamurella pseudospumae sp. nov., a novel actinomycete isolated from activated sludge foam. Int J Syst Evol Microbiol 54:1209–1212
doi: 10.1099/ijs.0.02939-0
Pérez-Cataluña A, Salas Massó N, Dieguez AL, Balboa S, Lema A, Romalde JL, Figueras MJ (2019) Corrigendum (2): revisiting the taxonomy of the genus Arcobacter: getting order from the chaos. Front Microbiol 10:2253
doi: 10.3389/fmicb.2019.02253
Rodriguez-Valera F, Ruiz-Berraquero F, Ramos-Cormenzana A (1981) Characteristics of the heterotrophic bacterial populations in hypersaline environments of different salt concentrations. Microb Ecol 7:235–243
doi: 10.1007/BF02010306
Saitou N, Nei M (1987) The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol Biol Evol 4:406–425
pubmed: 3447015
pmcid: 3447015
Yoon SH, Ha SM, Kwon S, Lim J, Kim Y, Seo H, Chun J (2017) Introducing EzBioCloud: a taxonomically united database of 16S rRNA gene sequences and whole-genome assemblies. Int J Syst Evol Microbiol 67:1613–1617
doi: 10.1099/ijsem.0.001755