Discovery of a small protein factor involved in the coordinated degradation of phycobilisomes in cyanobacteria.

Amino Acid Sequence Bacterial Proteins / chemistry Conserved Sequence Gene Expression Regulation, Bacterial / drug effects Models, Biological Mutation / genetics Nitrogen / deficiency Phenotype Photosynthesis Phycobilisomes / metabolism Phylogeny Protein Binding / drug effects RNA, Messenger / genetics Synechocystis / drug effects Transcriptome / genetics
cyanobacteria gene expression nitrogen starvation photosynthesis phycobilisomes

Journal

Proceedings of the National Academy of Sciences of the United States of America
ISSN: 1091-6490
Titre abrégé: Proc Natl Acad Sci U S A
Pays: United States
ID NLM: 7505876

Informations de publication

Date de publication:
02 02 2021
Historique:
entrez: 29 1 2021
pubmed: 30 1 2021
medline: 16 6 2021
Statut: ppublish

Résumé

Phycobilisomes are the major pigment-protein antenna complexes that perform photosynthetic light harvesting in cyanobacteria, rhodophyte, and glaucophyte algae. Up to 50% of the cellular nitrogen can be stored in their giant structures. Accordingly, upon nitrogen depletion, phycobilisomes are rapidly degraded following an intricate genetic program. Here, we describe the role of NblD, a cysteine-rich, small protein in this process in cyanobacteria. Deletion of the

Identifiants

DOI: 10.1073/pnas.2012277118 PMID: 33509926 PMC: PMC7865187
pubmed: 33509926
pii: 2012277118
doi: 10.1073/pnas.2012277118
pmc: PMC7865187
pii:
doi:

Substances chimiques

Bacterial Proteins 0
Phycobilisomes 0
RNA, Messenger 0
Nitrogen N762921K75

Types de publication

Journal Article Research Support, Non-U.S. Gov't

Langues

eng

Sous-ensembles de citation

IM

Informations de copyright

Copyright © 2021 the Author(s). Published by PNAS.

Déclaration de conflit d'intérêts

The authors declare no competing interest.

Références

Mol Microbiol. 2005 Nov;58(3):659-68
pubmed: 16238617
Res Microbiol. 2007 Jan-Feb;158(1):45-50
pubmed: 17224258
Microbiol Rev. 1993 Sep;57(3):725-49
pubmed: 8246846
BMC Microbiol. 2016 Nov 28;16(1):285
pubmed: 27894276
Plant J. 2015 Sep;83(5):845-52
pubmed: 26173720
Biochim Biophys Acta Bioenerg. 2020 Apr 1;1861(4):148047
pubmed: 31306623
Front Microbiol. 2019 Jun 25;10:1428
pubmed: 31293555
Curr Biol. 2008 Mar 25;18(6):410-8
pubmed: 18356055
Nat Struct Mol Biol. 2009 Mar;16(3):334-42
pubmed: 19219048
J Bacteriol. 1992 Jul;174(14):4718-26
pubmed: 1624459
Biochemistry. 2011 Feb 22;50(7):1121-4
pubmed: 21244052
Proc Natl Acad Sci U S A. 2002 Apr 2;99(7):4251-5
pubmed: 11917135
DNA Res. 2012 Dec;19(6):435-48
pubmed: 23069868
Proc Natl Acad Sci U S A. 2014 Jun 10;111(23):E2423-30
pubmed: 24912181
Microbiology (Reading). 2005 Aug;151(Pt 8):2503-2514
pubmed: 16079330
FEMS Microbiol Lett. 2001 Feb 5;195(1):35-9
pubmed: 11166992
Environ Microbiol. 2019 Apr;21(4):1173-1184
pubmed: 30318768
Trends Plant Sci. 2004 Mar;9(3):130-7
pubmed: 15003236
Nucleic Acids Res. 2003 Jan 15;31(2):532-50
pubmed: 12527760
Curr Microbiol. 2007 Jan;54(1):36-41
pubmed: 17171466
FEBS Lett. 2002 Feb 13;512(1-3):71-4
pubmed: 11852054
J Bacteriol. 2001 Mar;183(5):1505-10
pubmed: 11160079
Arch Mikrobiol. 1969;69(2):114-20
pubmed: 4986616
Plant J. 2018 Jun;94(5):813-821
pubmed: 29575252
J Biol Chem. 2001 Oct 12;276(41):38320-8
pubmed: 11479309
Curr Opin Microbiol. 2011 Apr;14(2):167-73
pubmed: 21342783
Biochemistry. 2002 Jun 25;41(25):8004-12
pubmed: 12069591
FEBS Lett. 2008 Apr 2;582(7):1093-6
pubmed: 18325343
Mol Microbiol. 2003 Nov;50(3):1043-54
pubmed: 14617160
J Struct Biol. 1998 Dec 15;124(2-3):311-34
pubmed: 10049814
ISME J. 2014 Dec;8(12):2530-42
pubmed: 25226029
Nat Rev Microbiol. 2018 May;16(5):263-276
pubmed: 29398704
Proc Natl Acad Sci U S A. 2015 Nov 10;112(45):E6243-52
pubmed: 26494284
Plant Cell. 2014 Mar;26(3):1200-12
pubmed: 24681620
Curr Biol. 2016 Nov 7;26(21):2862-2872
pubmed: 27720620
mBio. 2019 Mar 5;10(2):
pubmed: 30837344
Curr Opin Biotechnol. 2018 Feb;49:94-99
pubmed: 28843192
Nat Protoc. 2007;2(12):3278-84
pubmed: 18079728
Science. 2008 Nov 14;322(5904):1110-2
pubmed: 19008448
Photosynth Res. 2017 Apr;132(1):95-106
pubmed: 28078551
Photosynth Res. 2008 Feb-Mar;95(2-3):135-45
pubmed: 17912610
Plant J. 2020 May;102(3):529-540
pubmed: 31820831
Nucleic Acids Res. 2017 Jan 4;45(D1):D551-D554
pubmed: 27899668
DNA Res. 2014 Oct;21(5):527-39
pubmed: 24935866
Biochim Biophys Acta. 2009 Apr;1787(4):272-9
pubmed: 19344661
Nucleic Acids Res. 2019 Jan 8;47(D1):D442-D450
pubmed: 30395289
Mol Cell Proteomics. 2018 Sep;17(9):1650-1669
pubmed: 29848780
PLoS One. 2015 Sep 11;10(9):e0137652
pubmed: 26360249
Proc Natl Acad Sci U S A. 2011 Feb 1;108(5):2124-9
pubmed: 21245330
J Biol Chem. 2006 Feb 24;281(8):5216-23
pubmed: 16356935
Molecules. 2015 Aug 12;20(8):14621-37
pubmed: 26274949
Biochim Biophys Acta. 2014 Oct;1837(10):1653-64
pubmed: 25046143
Nucleic Acids Res. 2018 Jul 2;46(W1):W296-W303
pubmed: 29788355
J Biol Chem. 2008 Nov 21;283(47):32394-403
pubmed: 18818204
Arch Microbiol. 2002 Oct;178(4):256-66
pubmed: 12209258
Mol Microbiol. 2008 Feb;67(4):772-80
pubmed: 18179416
Nucleic Acids Res. 2017 Nov 16;45(20):11800-11820
pubmed: 29036481
Microbiology (Reading). 1998 Sep;144 ( Pt 9):2449-58
pubmed: 9782492
Mol Cell Proteomics. 2014 Sep;13(9):2513-26
pubmed: 24942700
Biochim Biophys Acta. 2016 Mar;1857(3):288-95
pubmed: 26341017
EMBO J. 1994 Mar 1;13(5):1039-47
pubmed: 8131738
Curr Opin Biotechnol. 2019 Oct;59:150-156
pubmed: 31238294
Mol Microbiol. 2000 Mar;35(5):1192-201
pubmed: 10712699
Proc Natl Acad Sci U S A. 2001 Apr 24;98(9):5116-21
pubmed: 11309499
Sci Rep. 2015 Apr 22;5:9560
pubmed: 25902393
J Bacteriol. 1999 Jan;181(2):610-7
pubmed: 9882677
FEBS Lett. 2003 Nov 27;555(1):40-4
pubmed: 14630316
Microbiol Mol Biol Rev. 1999 Mar;63(1):106-27
pubmed: 10066832
Nature. 2011 May 19;473(7347):337-42
pubmed: 21593866
Front Mol Biosci. 2018 Nov 13;5:91
pubmed: 30483512
Sci Rep. 2018 Jun 14;8(1):9142
pubmed: 29904088
J Biol Chem. 2009 Apr 10;284(15):9861-9
pubmed: 19189962
Sci Rep. 2019 Feb 22;9(1):2560
pubmed: 30796245
Nat Methods. 2016 Sep;13(9):731-40
pubmed: 27348712
PLoS One. 2013;8(2):e56470
pubmed: 23441196
Proc Natl Acad Sci U S A. 1998 Sep 1;95(18):11008-13
pubmed: 9724820
Mol Syst Biol. 2015 Jan 21;11(1):780
pubmed: 25609650
Cell Chem Biol. 2019 Jun 20;26(6):852-862.e6
pubmed: 31006617
Mol Microbiol. 2006 Jul;61(2):457-69
pubmed: 16796668
J Biol Chem. 2014 Apr 25;289(17):11755-66
pubmed: 24610785
Mol Cell. 2019 May 2;74(3):481-493.e6
pubmed: 30904393
Proc Natl Acad Sci U S A. 2013 Jun 11;110(24):9824-9
pubmed: 23703908
J Bacteriol. 2002 May;184(9):2481-90
pubmed: 11948163
Plant Cell Physiol. 2011 Dec;52(12):2115-22
pubmed: 22021405
Nat Rev Microbiol. 2015 Jan;13(1):13-27
pubmed: 25435307

Auteurs

Vanessa Krauspe (V)

Genetics and Experimental Bioinformatics, Faculty of Biology, University of Freiburg, 79104 Freiburg, Germany.
ORCID: 0000-0001-5201-4170

Matthias Fahrner (M)

Institute for Surgical Pathology, Medical Center-University of Freiburg, Faculty of Medicine, University of Freiburg, 79106 Freiburg, Germany.
Faculty of Biology, Albert-Ludwigs University of Freiburg, 79104 Freiburg, Germany.
Spemann Graduate School of Biology and Medicine, Albert-Ludwigs University of Freiburg, 79104 Freiburg, Germany.
ORCID: 0000-0001-7955-2518

Philipp Spät (P)

Department of Quantitative Proteomics, Interfaculty Institute for Cell Biology, University of Tübingen, 72076 Tübingen, Germany.
ORCID: 0000-0001-6349-099X

Claudia Steglich (C)

Genetics and Experimental Bioinformatics, Faculty of Biology, University of Freiburg, 79104 Freiburg, Germany.

Nicole Frankenberg-Dinkel (N)

Department of Microbiology, Faculty of Biology, University of Kaiserslautern, 67663 Kaiserslautern, Germany.
ORCID: 0000-0002-7757-6839

Boris Maček (B)

Department of Quantitative Proteomics, Interfaculty Institute for Cell Biology, University of Tübingen, 72076 Tübingen, Germany.
ORCID: 0000-0002-1206-2458

Oliver Schilling (O)

Institute for Surgical Pathology, Medical Center-University of Freiburg, Faculty of Medicine, University of Freiburg, 79106 Freiburg, Germany.

Wolfgang R Hess (WR)

Genetics and Experimental Bioinformatics, Faculty of Biology, University of Freiburg, 79104 Freiburg, Germany; wolfgang.hess@biologie.uni-freiburg.de.
ORCID: 0000-0002-5340-3423

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Classifications MeSH

questionsmedicales.fr › Sciences de l'information › Sources d'information › Services d'information › Documentation › Données de séquences moléculaires › Séquence d'acides aminés › Discovery of a small protein factor involved...
questionsmedicales.fr › Acides aminés, peptides et protéines › Protéines › Protéines bactériennes › Discovery of a small protein factor involved...
questionsmedicales.fr › Phénomènes chimiques › Phénomènes biochimiques › Séquence conservée › Discovery of a small protein factor involved...
questionsmedicales.fr › Phénomènes génétiques › Régulation de l'expression des gènes › Régulation de l'expression des gènes bactériens › Discovery of a small protein factor involved...
questionsmedicales.fr › Techniques d'investigation › Modèles théoriques › Modèles biologiques › Discovery of a small protein factor involved...
questionsmedicales.fr › Phénomènes génétiques › Variation génétique › Mutation › Discovery of a small protein factor involved...
questionsmedicales.fr › Produits chimiques inorganiques › Gaz › Azote › Discovery of a small protein factor involved...
questionsmedicales.fr › Phénomènes génétiques › Phénotype › Discovery of a small protein factor involved...
questionsmedicales.fr › Phénomènes physiologiques des plantes › Photosynthèse › Discovery of a small protein factor involved...
questionsmedicales.fr › Enzymes et coenzymes › Enzymes › Complexes multienzymatiques › Phycobilisomes › Discovery of a small protein factor involved...
questionsmedicales.fr › Sciences de l'information › Phylogenèse › Discovery of a small protein factor involved...
questionsmedicales.fr › Métabolisme › Liaison aux protéines › Discovery of a small protein factor involved...
questionsmedicales.fr › Acides nucléiques, nucléotides et nucléosides › Acides nucléiques › ARN › ARN messager › Discovery of a small protein factor involved...
questionsmedicales.fr › Bactéries › Bactéries à Gram négatif › Bactéries à Gram négatif photosynthétiques › Cyanobactéries › Synechocystis › Discovery of a small protein factor involved...
questionsmedicales.fr › Phénomènes génétiques › Structures génétiques › Transcriptome › Discovery of a small protein factor involved...