Matthias Fahrner

Affiliations

Institute for Surgical Pathology, Medical Center-University of Freiburg, Faculty of Medicine, University of Freiburg, 79106 Freiburg, Germany.
Faculty of Biology, Albert-Ludwigs University of Freiburg, 79104 Freiburg, Germany.
Spemann Graduate School of Biology and Medicine, Albert-Ludwigs University of Freiburg, 79104 Freiburg, Germany.

Publications (29)

Orai1 Boosts SK3 Channel Activation.

Cancers

Avec: Adéla Tiffner , Valentina Hopl , Romana Schober , Matthias Sallinger , Herwig Grabmayr , Carmen Höglinger , Marc Fahrner , Victoria Lunz , Lena Maltan , Irene Frischauf , Denis Krivic , Rajesh Bhardwaj , Rainer Schindl , Matthias A Hediger , Isabella Derler

Oxidative Stress-Induced STIM2 Cysteine Modifications Suppress Store-Operated Calcium Entry.

Cell reports

Avec: Christine Silvia Gibhardt , Sabrina Cappello , Rajesh Bhardwaj , Romana Schober , Sonja Agnes Kirsch , Zuriñe Bonilla Del Rio , Stefan Gahbauer , Anna Bochicchio , Magdalena Sumanska , Christian Ickes , Ioana Stejerean-Todoran , Miso Mitkovski , Dalia Alansary , Xin Zhang , Aram Revazian , Marc Fahrner , Victoria Lunz , Irene Frischauf , Ting Luo , Daria Ezerina , Joris Messens , Vsevolod Vadimovich Belousov , Markus Hoth , Rainer Arnold Böckmann , Matthias Albrecht Hediger , Rainer Schindl , Ivan Bogeski

A single amino acid deletion in the ER Ca

Science signaling

Avec: Thilini H Gamage , Herwig Grabmayr , Ferdinand Horvath , Marc Fahrner , Doriana Misceo , William Edward Louch , Gjermund Gunnes , Helen Pullisaar , Janne Elin Reseland , Staale Petter Lyngstadaas , Asbjørn Holmgren , Silja S Amundsen , Petr Rathner , Linda Cerofolini , Enrico Ravera , Heinrich Krobath , Claudio Luchinat , Thomas Renger , Norbert Müller , Christoph Romanin , Eirik Frengen

CRAC channel opening is determined by a series of Orai1 gating checkpoints in the transmembrane and cytosolic regions.

The Journal of biological chemistry

Avec: Adéla Tiffner , Romana Schober , Carmen Höglinger , Daniel Bonhenry , Saurabh Pandey , Victoria Lunz , Matthias Sallinger , Irene Frischauf , Marc Fahrner , Sonja Lindinger , Lena Maltan , Sascha Berlansky , Michael Stadlbauer , Rainer Schindl , Rudiger Ettrich , Christoph Romanin , Isabella Derler

Mechanism of STIM activation.

Current opinion in physiology

Avec: Marc Fahrner , Herwig Grabmayr , Christoph Romanin

Discovery of a small protein factor involved in the coordinated degradation of phycobilisomes in cyanobacteria.

Proceedings of the National Academy of Sciences of the United States of America

Avec: Vanessa Krauspe , Matthias Fahrner , Philipp Spät , Claudia Steglich , Nicole Frankenberg-Dinkel , Boris Maček , Oliver Schilling , Wolfgang R Hess

Depletion of histone methyltransferase KMT9 inhibits lung cancer cell proliferation by inducing non-apoptotic cell death.

Cancer cell international

Avec: Hannah Maria Baumert , Eric Metzger , Matthias Fahrner , Julie George , Roman K Thomas , Oliver Schilling , Roland Schüle

Defects in the STIM1 SOARα2 domain affect multiple steps in the CRAC channel activation cascade.

Cellular and molecular life sciences : CMLS

Avec: Carmen Höglinger , Herwig Grabmayr , Lena Maltan , Ferdinand Horvath , Heinrich Krobath , Martin Muik , Adela Tiffner , Thomas Renger , Christoph Romanin , Marc Fahrner , Isabella Derler

The many states of STIM1.

eLife

Avec: Marc Fahrner , Christoph Romanin

Science CommuniCa

Cells

Avec: Christina Humer , Sascha Berlansky , Herwig Grabmayr , Matthias Sallinger , Andreas Bernhard , Marc Fahrner , Irene Frischauf

Galaxy Training: A powerful framework for teaching!

PLoS computational biology

Avec: Saskia Hiltemann , Helena Rasche , Simon Gladman , Hans-Rudolf Hotz , Delphine Larivière , Daniel Blankenberg , Pratik D Jagtap , Thomas Wollmann , Anthony Bretaudeau , Nadia Goué , Timothy J Griffin , Coline Royaux , Yvan Le Bras , Subina Mehta , Anna Syme , Frederik Coppens , Bert Droesbeke , Nicola Soranzo , Wendi Bacon , Fotis Psomopoulos , Cristóbal Gallardo-Alba , John Davis , Melanie Christine Föll , Matthias Fahrner , Maria A Doyle , Beatriz Serrano-Solano , Anne Claire Fouilloux , Peter van Heusden , Wolfgang Maier , Dave Clements , Florian Heyl , Auteur inconnu , Björn Grüning , Bérénice Batut

Sequential activation of STIM1 links Ca

Science signaling

Avec: Romana Schober , Daniel Bonhenry , Victoria Lunz , Jinhui Zhu , Adela Krizova , Irene Frischauf , Marc Fahrner , MengQi Zhang , Linda Waldherr , Tony Schmidt , Isabella Derler , Peter B Stathopulos , Christoph Romanin , Rüdiger H Ettrich , Rainer Schindl

STIM Proteins: An Ever-Expanding Family.

International journal of molecular sciences

Avec: Herwig Grabmayr , Christoph Romanin , Marc Fahrner

Fostering accessible online education using Galaxy as an e-learning platform.

PLoS computational biology

Avec: Beatriz Serrano-Solano , Melanie C Föll , Cristóbal Gallardo-Alba , Anika Erxleben , Helena Rasche , Saskia Hiltemann , Matthias Fahrner , Mark J Dunning , Marcel H Schulz , Beáta Scholtz , Dave Clements , Anton Nekrutenko , Bérénice Batut , Björn A Grüning

Using proteomics for stratification and risk prediction in patients with solid tumors.

Pathologie (Heidelberg, Germany)

Avec: Tilman Werner , Matthias Fahrner , Oliver Schilling

The switching process from buprenorphine sublingual tablets to the monthly buprenorphine subcutaneous depot injection in opioid dependent patients.

Addiction biology

Avec: Stephanie Paula Elisabeth Guillery , Sven Reiners , Marius Fahrner , Sören Enge , Rainer Hellweg , Hagen Kunte , Golo Kronenberg

EEG Reactivity in Neurologic Prognostication in Post-Cardiac Arrest Patients: A Narrative Review.

Resuscitation

Avec: Marlen Fahrner , Jaeho Hwang , Sung-Min Cho , Nitish V Thakor , Christa W Habela , Peter W Kaplan , Romergryko G Geocadin

Subgroup stratification and outcome in recently diagnosed generalized myasthenia gravis.

Neurology

Avec: Matthias Tomschik , Eva Hilger , Jakob Rath , Eva-Maria Mayer , Michael Fahrner , Hakan Cetin , Wolfgang N Löscher , Fritz Zimprich

Interhelical interactions within the STIM1 CC1 domain modulate CRAC channel activation.

Nature chemical biology

Avec: Petr Rathner , Marc Fahrner , Linda Cerofolini , Herwig Grabmayr , Ferdinand Horvath , Heinrich Krobath , Agrim Gupta , Enrico Ravera , Marco Fragai , Matthias Bechmann , Thomas Renger , Claudio Luchinat , Christoph Romanin , Norbert Müller

Transmembrane Domain 3 (TM3) Governs Orai1 and Orai3 Pore Opening in an Isoform-Specific Manner.

Frontiers in cell and developmental biology

Avec: Adéla Tiffner , Lena Maltan , Marc Fahrner , Matthias Sallinger , Sarah Weiß , Herwig Grabmayr , Carmen Höglinger , Isabella Derler

A Systematic Evaluation of Semispecific Peptide Search Parameter Enables Identification of Previously Undescribed N-Terminal Peptides and Conserved Proteolytic Processing in Cancer Cell Lines.

Proteomes

Avec: Matthias Fahrner , Lucas Kook , Klemens Fröhlich , Martin L Biniossek , Oliver Schilling

Calcium Signals during SARS-CoV-2 Infection: Assessing the Potential of Emerging Therapies.

Cells

Avec: Sascha Berlansky , Matthias Sallinger , Herwig Grabmayr , Christina Humer , Andreas Bernhard , Marc Fahrner , Irene Frischauf

Democratizing data-independent acquisition proteomics analysis on public cloud infrastructures via the Galaxy framework.

GigaScience

Avec: Matthias Fahrner , Melanie Christine Föll , Björn Andreas Grüning , Matthias Bernt , Hannes Röst , Oliver Schilling

Swing-out opening of stromal interaction molecule 1.

Protein science : a publication of the Protein Society

Avec: Ferdinand Horvath , Sascha Berlansky , Lena Maltan , Herwig Grabmayr , Marc Fahrner , Isabella Derler , Christoph Romanin , Thomas Renger , Heinrich Krobath

Targeted and explorative profiling of kallikrein proteases and global proteome biology of pancreatic ductal adenocarcinoma, chronic pancreatitis, and normal pancreas highlights disease-specific proteome remodelling.

Neoplasia (New York, N.Y.)

Avec: Janina Werner , Patrick Bernhard , Miguel Cosenza-Contreras , Niko Pinter , Matthias Fahrner , Prama Pallavi , Johannes Eberhard , Peter Bronsert , Felix Rückert , Oliver Schilling

Integration of proteomics in the molecular tumor board.

Proteomics

Avec: Johanna Thiery , Matthias Fahrner

Data-independent acquisition: A milestone and prospect in clinical mass spectrometry-based proteomics.

Molecular & cellular proteomics : MCP

Avec: Klemens Fröhlich , Matthias Fahrner , Eva Brombacher , Adrianna Seredynska , Maximilian Maldacker , Clemens Kreutz , Alexander Schmidt , Oliver Schilling

Proteome biology of primary colorectal carcinoma and corresponding liver metastases.

Neoplasia (New York, N.Y.)

Avec: Matthias Fahrner , Peter Bronsert , Stefan Fichtner-Feigl , Andreas Jud , Oliver Schilling

Netherton syndrome subtypes share IL-17/IL-36 signature with distinct IFN-α and allergic responses.

The Journal of allergy and clinical immunology

Avec: Claire Barbieux , Mathilde Bonnet des Claustres , Matthias Fahrner , Evgeniya Petrova , Lam C Tsoi , Olivier Gouin , Florent Leturcq , Pascale Nicaise-Roland , Christine Bole , Vivien Béziat , Emmanuelle Bourrat , Oliver Schilling , Johann E Gudjonsson , Alain Hovnanian

Réseau de co-auteurs

Marc Fahrner 14 collaborations

Herwig Grabmayr 10 collaborations

Christoph Romanin 9 collaborations

Oliver Schilling 9 collaborations

Irene Frischauf 6 collaborations

Isabella Derler 6 collaborations

Matthias Sallinger 5 collaborations

Lena Maltan 5 collaborations

Romana Schober 4 collaborations

Carmen Höglinger 4 collaborations

Victoria Lunz 4 collaborations

Rainer Schindl 4 collaborations

Ferdinand Horvath 4 collaborations

Heinrich Krobath 4 collaborations

Thomas Renger 4 collaborations

Sascha Berlansky 4 collaborations

Adéla Tiffner 3 collaborations

Rajesh Bhardwaj 2 collaborations

Petr Rathner 2 collaborations

Linda Cerofolini 2 collaborations

Enrico Ravera 2 collaborations

Claudio Luchinat 2 collaborations

Norbert Müller 2 collaborations

Daniel Bonhenry 2 collaborations

Christina Humer 2 collaborations

Andreas Bernhard 2 collaborations

Saskia Hiltemann 2 collaborations

Helena Rasche 2 collaborations

Cristóbal Gallardo-Alba 2 collaborations

Melanie Christine Föll 2 collaborations

Beatriz Serrano-Solano 2 collaborations

Dave Clements 2 collaborations

Bérénice Batut 2 collaborations

Klemens Fröhlich 2 collaborations

Peter Bronsert 2 collaborations

Valentina Hopl 1 collaboration

Denis Krivic 1 collaboration

Matthias A Hediger 1 collaboration

Christine Silvia Gibhardt 1 collaboration

Sabrina Cappello 1 collaboration

Sonja Agnes Kirsch 1 collaboration

Zuriñe Bonilla Del Rio 1 collaboration

Stefan Gahbauer 1 collaboration

Anna Bochicchio 1 collaboration

Magdalena Sumanska 1 collaboration

Christian Ickes 1 collaboration

Ioana Stejerean-Todoran 1 collaboration

Miso Mitkovski 1 collaboration

Dalia Alansary 1 collaboration

Xin Zhang 1 collaboration

Aram Revazian 1 collaboration

Ting Luo 1 collaboration

Daria Ezerina 1 collaboration

Joris Messens 1 collaboration

Vsevolod Vadimovich Belousov 1 collaboration

Markus Hoth 1 collaboration

Rainer Arnold Böckmann 1 collaboration

Matthias Albrecht Hediger 1 collaboration

Ivan Bogeski 1 collaboration

Thilini H Gamage 1 collaboration

Doriana Misceo 1 collaboration

William Edward Louch 1 collaboration

Gjermund Gunnes 1 collaboration

Helen Pullisaar 1 collaboration

Janne Elin Reseland 1 collaboration

Staale Petter Lyngstadaas 1 collaboration

Asbjørn Holmgren 1 collaboration

Silja S Amundsen 1 collaboration

Eirik Frengen 1 collaboration

Saurabh Pandey 1 collaboration

Sonja Lindinger 1 collaboration

Michael Stadlbauer 1 collaboration

Rudiger Ettrich 1 collaboration

Vanessa Krauspe 1 collaboration

Philipp Spät 1 collaboration

Claudia Steglich 1 collaboration

Nicole Frankenberg-Dinkel 1 collaboration

Boris Maček 1 collaboration

Wolfgang R Hess 1 collaboration

Hannah Maria Baumert 1 collaboration

Eric Metzger 1 collaboration

Julie George 1 collaboration

Roman K Thomas 1 collaboration

Roland Schüle 1 collaboration

Martin Muik 1 collaboration

Adela Tiffner 1 collaboration

Simon Gladman 1 collaboration

Hans-Rudolf Hotz 1 collaboration

Delphine Larivière 1 collaboration

Daniel Blankenberg 1 collaboration

Pratik D Jagtap 1 collaboration

Thomas Wollmann 1 collaboration

Anthony Bretaudeau 1 collaboration

Nadia Goué 1 collaboration

Timothy J Griffin 1 collaboration

Coline Royaux 1 collaboration

Yvan Le Bras 1 collaboration

Subina Mehta 1 collaboration

Anna Syme 1 collaboration

Frederik Coppens 1 collaboration

Bert Droesbeke 1 collaboration

Nicola Soranzo 1 collaboration

Wendi Bacon 1 collaboration

Fotis Psomopoulos 1 collaboration

John Davis 1 collaboration

Maria A Doyle 1 collaboration

Anne Claire Fouilloux 1 collaboration

Peter van Heusden 1 collaboration

Wolfgang Maier 1 collaboration

Florian Heyl 1 collaboration

None None 1 collaboration

Björn Grüning 1 collaboration

Jinhui Zhu 1 collaboration

Adela Krizova 1 collaboration

MengQi Zhang 1 collaboration

Linda Waldherr 1 collaboration

Tony Schmidt 1 collaboration

Peter B Stathopulos 1 collaboration

Rüdiger H Ettrich 1 collaboration

Melanie C Föll 1 collaboration

Anika Erxleben 1 collaboration

Mark J Dunning 1 collaboration

Marcel H Schulz 1 collaboration

Beáta Scholtz 1 collaboration

Anton Nekrutenko 1 collaboration

Björn A Grüning 1 collaboration

Tilman Werner 1 collaboration

Stephanie Paula Elisabeth Guillery 1 collaboration

Sven Reiners 1 collaboration

Marius Fahrner 1 collaboration

Sören Enge 1 collaboration

Rainer Hellweg 1 collaboration

Hagen Kunte 1 collaboration

Golo Kronenberg 1 collaboration

Marlen Fahrner 1 collaboration

Jaeho Hwang 1 collaboration

Sung-Min Cho 1 collaboration

Nitish V Thakor 1 collaboration

Christa W Habela 1 collaboration

Peter W Kaplan 1 collaboration

Romergryko G Geocadin 1 collaboration

Matthias Tomschik 1 collaboration

Eva Hilger 1 collaboration

Jakob Rath 1 collaboration

Eva-Maria Mayer 1 collaboration

Michael Fahrner 1 collaboration

Hakan Cetin 1 collaboration

Wolfgang N Löscher 1 collaboration

Fritz Zimprich 1 collaboration

Agrim Gupta 1 collaboration

Marco Fragai 1 collaboration

Matthias Bechmann 1 collaboration

Sarah Weiß 1 collaboration

Lucas Kook 1 collaboration

Martin L Biniossek 1 collaboration

Björn Andreas Grüning 1 collaboration

Matthias Bernt 1 collaboration

Hannes Röst 1 collaboration

Janina Werner 1 collaboration

Patrick Bernhard 1 collaboration

Miguel Cosenza-Contreras 1 collaboration

Niko Pinter 1 collaboration

Prama Pallavi 1 collaboration

Johannes Eberhard 1 collaboration

Felix Rückert 1 collaboration

Johanna Thiery 1 collaboration

Eva Brombacher 1 collaboration

Adrianna Seredynska 1 collaboration

Maximilian Maldacker 1 collaboration

Clemens Kreutz 1 collaboration

Alexander Schmidt 1 collaboration

Stefan Fichtner-Feigl 1 collaboration

Andreas Jud 1 collaboration

Claire Barbieux 1 collaboration

Mathilde Bonnet des Claustres 1 collaboration

Evgeniya Petrova 1 collaboration

Lam C Tsoi 1 collaboration

Olivier Gouin 1 collaboration

Florent Leturcq 1 collaboration

Pascale Nicaise-Roland 1 collaboration

Christine Bole 1 collaboration

Vivien Béziat 1 collaboration

Emmanuelle Bourrat 1 collaboration

Johann E Gudjonsson 1 collaboration

Alain Hovnanian 1 collaboration