Effective dynamics of nucleosome configurations at the yeast
PHO5 promoter
S. cerevisiae
chromatin regulation
chromatin remodeling
chromosomes
computational biology
gene expression
nucleosome configurations
nucleosome dynamics
systems biology
Journal
eLife
ISSN: 2050-084X
Titre abrégé: Elife
Pays: England
ID NLM: 101579614
Informations de publication
Date de publication:
05 03 2021
05 03 2021
Historique:
received:
29
04
2020
accepted:
04
03
2021
pubmed:
6
3
2021
medline:
5
2
2022
entrez:
5
3
2021
Statut:
epublish
Résumé
Chromatin dynamics are mediated by remodeling enzymes and play crucial roles in gene regulation, as established in a paradigmatic model, the
Identifiants
pubmed: 33666171
doi: 10.7554/eLife.58394
pii: 58394
pmc: PMC8004102
doi:
pii:
Substances chimiques
Histones
0
Nucleosomes
0
Saccharomyces cerevisiae Proteins
0
Acid Phosphatase
EC 3.1.3.2
PHO5 protein, S cerevisiae
EC 3.1.3.2
Banques de données
GEO
['GSE6666', 'GSE8299']
Types de publication
Journal Article
Research Support, Non-U.S. Gov't
Langues
eng
Sous-ensembles de citation
IM
Informations de copyright
© 2021, Wolff et al.
Déclaration de conflit d'intérêts
MW, AS, PK, UG No competing interests declared
Références
Mol Cell. 2007 Sep 7;27(5):817-28
pubmed: 17803945
Sci Rep. 2016 Feb 04;6:20319
pubmed: 26843321
Oncogene. 2001 May 28;20(24):3039-46
pubmed: 11420719
Cell Syst. 2016 Jan 27;2(1):49-58
pubmed: 27136689
Nat Methods. 2020 Dec;17(12):1191-1199
pubmed: 33230324
Nature. 1997 Sep 18;389(6648):251-60
pubmed: 9305837
Genes Dev. 2006 Aug 1;20(15):2009-17
pubmed: 16882978
J Mol Biol. 2017 Mar 24;429(6):808-822
pubmed: 28189426
Mol Cell Biol. 2005 Apr;25(7):2698-707
pubmed: 15767675
J Biol Chem. 2006 Mar 3;281(9):5539-45
pubmed: 16407267
Cell. 2002 Feb 22;108(4):475-87
pubmed: 11909519
J Mol Biol. 1993 Jun 5;231(3):658-67
pubmed: 8515443
Genes Dev. 2014 Nov 15;28(22):2492-7
pubmed: 25403179
Mol Cell Biol. 2000 Mar;20(6):1899-910
pubmed: 10688638
Nature. 1994 Feb 10;367(6463):525-32
pubmed: 8107823
Methods Mol Biol. 1999;119:417-25
pubmed: 10804529
Science. 2007 Mar 9;315(5817):1405-8
pubmed: 17347438
Mol Cell. 2018 Jul 19;71(2):294-305.e4
pubmed: 30017582
Mol Biol Cell. 2008 Aug;19(8):3308-22
pubmed: 18508913
EMBO J. 1994 Oct 17;13(20):4848-55
pubmed: 7957054
Cell. 1999 Apr 30;97(3):299-311
pubmed: 10319811
Nat Rev Mol Cell Biol. 2003 Aug;4(8):613-20
pubmed: 12923523
Annu Rev Biophys. 2020 May 6;49:199-226
pubmed: 32375018
EMBO J. 1986 Oct;5(10):2681-7
pubmed: 3023055
Proc Natl Acad Sci U S A. 2014 Dec 16;111(50):17893-8
pubmed: 25468975
J Mol Biol. 1986 Oct 20;191(4):659-75
pubmed: 3806678
Sci Adv. 2016 Nov 11;2(11):e1601865
pubmed: 27847876
Mol Cell Biol. 2003 May;23(10):3468-76
pubmed: 12724405
Nat Rev Mol Cell Biol. 2017 Jul;18(7):407-422
pubmed: 28512350
Cell. 2001 Mar 23;104(6):817-27
pubmed: 11290320
Mol Cell. 2007 Aug 3;27(3):393-405
pubmed: 17679090
EMBO J. 1994 Oct 17;13(20):4856-62
pubmed: 7957055
Cell. 2016 Oct 20;167(3):709-721.e12
pubmed: 27768892
Science. 1993 Dec 3;262(5139):1563-6
pubmed: 8248805
Trends Genet. 2000 Aug;16(8):345-51
pubmed: 10904263
EMBO J. 1986 Oct;5(10):2689-96
pubmed: 3536481
Science. 1996 Jan 12;271(5246):209-12
pubmed: 8539622
Nat Genet. 2013 Oct;45(10):1207-15
pubmed: 23955598
Genes Dev. 2017 Nov 15;31(22):2204-2221
pubmed: 29284710
Chromosoma. 2015 Jun;124(2):131-51
pubmed: 25529773
Mol Cell Biol. 2009 Jun;29(11):2960-81
pubmed: 19307305
Mol Cell. 2005 Jul 22;19(2):279-85
pubmed: 16039596
Mol Cell. 2006 Nov 17;24(4):559-68
pubmed: 17188033
Nat Rev Mol Cell Biol. 2017 Sep;18(9):548-562
pubmed: 28537572
Proc Natl Acad Sci U S A. 2014 Jun 17;111(24):E2462-71
pubmed: 24889621
J Biol Chem. 2004 Aug 6;279(32):33057-62
pubmed: 15180994
Elife. 2019 Mar 19;8:
pubmed: 30888317
Nucleic Acids Res. 2014 Apr;42(7):4270-82
pubmed: 24465003
Nucleic Acids Res. 1992 Mar 11;20(5):1031-8
pubmed: 1567507
J Biol Chem. 2007 Sep 21;282(38):27610-21
pubmed: 17631505
Cell. 1999 Jun 25;97(7):843-52
pubmed: 10399913
Science. 1992 Dec 11;258(5089):1780-4
pubmed: 1465613
Mol Cell. 1999 Oct;4(4):657-64
pubmed: 10549298
Annu Rev Biophys. 2016 Jul 5;45:153-81
pubmed: 27391925
Cell. 2002 Nov 1;111(3):369-79
pubmed: 12419247
Cell. 1999 Jun 25;97(7):833-42
pubmed: 10399912
Nature. 2007 Dec 13;450(7172):1031-5
pubmed: 18075583
Nat Rev Genet. 2011 Jul 12;12(8):554-64
pubmed: 21747402
Science. 2020 Jun 26;368(6498):1449-1454
pubmed: 32587015
EMBO J. 2001 Sep 3;20(17):4944-51
pubmed: 11532958
Cell. 1992 Nov 27;71(5):853-64
pubmed: 1423633
Annu Rev Biochem. 2014;83:671-96
pubmed: 24606138
Annu Rev Biochem. 2002;71:247-73
pubmed: 12045097
Mol Cell. 1999 Nov;4(5):735-43
pubmed: 10619021
Nat Methods. 2020 Mar;17(3):319-327
pubmed: 32042188
Cell. 1999 Feb 5;96(3):389-92
pubmed: 10025404
Nat Genet. 2020 Apr;52(4):418-427
pubmed: 32203463
Nature. 2012 Jun 28;486(7404):496-501
pubmed: 22722846
Genes Dev. 1999 Sep 15;13(18):2369-74
pubmed: 10500094
Science. 1999 May 7;284(5416):977-80
pubmed: 10320381
Mol Cell Biol. 2010 Aug;30(16):4060-76
pubmed: 20566699
Genome Res. 2019 Dec;29(12):1996-2009
pubmed: 31694866
Nucleic Acids Res. 2014;42(17):10888-902
pubmed: 25190457
PLoS Biol. 2013;11(8):e1001621
pubmed: 23940458
Mol Cell. 1999 Oct;4(4):649-55
pubmed: 10549297