Long-Term Adaptation of Acidophilic Archaeal Ammonia Oxidisers Following Different Soil Fertilisation Histories.
AmoA
Ca. Nitrosotaleaceae
Fertilisation
Low pH
Nitrososphaerales
Soil nitrification
Journal
Microbial ecology
ISSN: 1432-184X
Titre abrégé: Microb Ecol
Pays: United States
ID NLM: 7500663
Informations de publication
Date de publication:
Feb 2022
Feb 2022
Historique:
received:
06
10
2020
accepted:
21
04
2021
pubmed:
11
5
2021
medline:
5
3
2022
entrez:
10
5
2021
Statut:
ppublish
Résumé
Ammonia oxidising archaea (AOA) are ecologically important nitrifiers in acidic agricultural soils. Two AOA phylogenetic clades, belonging to order-level lineages of Nitrososphaerales (clade C11; also classified as NS-Gamma-2.3.2) and family-level lineage of Candidatus Nitrosotaleaceae (clade C14; NT-Alpha-1.1.1), usually dominate AOA population in low pH soils. This study aimed to investigate the effect of different fertilisation histories on community composition and activity of acidophilic AOA in soils. High-throughput sequencing of ammonia monooxygenase gene (amoA) was performed on six low pH agricultural plots originating from the same soil but amended with different types of fertilisers for over 20 years and nitrification rates in those soils were measured. In these fertilised acidic soils, nitrification was likely dominated by Nitrososphaerales AOA and ammonia-oxidising bacteria, while Ca. Nitrosotaleaceae AOA activity was non-significant. Within Nitrososphaerales AOA, community composition differed based on the fertilisation history, with Nitrososphaerales C11 only representing a low proportion of the community. This study revealed that long-term soil fertilisation selects for different acidophilic nitrifier communities, potentially through soil pH change or through direct effect of nitrogen, potassium and phosphorus. Comparative community composition among the differently fertilised soils also highlighted the existence of AOA phylotypes with different levels of stability to environmental changes, contributing to the understanding of high AOA diversity maintenance in terrestrial ecosystems.
Identifiants
pubmed: 33970312
doi: 10.1007/s00248-021-01763-2
pii: 10.1007/s00248-021-01763-2
pmc: PMC8891100
doi:
Substances chimiques
Soil
0
Ammonia
7664-41-7
Types de publication
Journal Article
Langues
eng
Sous-ensembles de citation
IM
Pagination
424-435Subventions
Organisme : National Natural Science Foundation of China
ID : 41530857
Organisme : National Natural Science Foundation of China
ID : 91751204
Organisme : National Natural Science Foundation of China
ID : 41977056
Organisme : The Royal Society
ID : URF150571
Organisme : Natural Environment Research Council
ID : NE/ K016342/1
Informations de copyright
© 2021. The Author(s).
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