Modulation of NF-YB genes in Ricinus communis L. in response to different temperatures and developmental stages and functional characterization of RcNF-YB8 as an important regulator of flowering time in Arabidopsis thaliana.

Castor bean Flowering time Nuclear transcription factor Phenotyping Ricinus communis

Journal

Plant physiology and biochemistry : PPB
ISSN: 1873-2690
Titre abrégé: Plant Physiol Biochem
Pays: France
ID NLM: 9882449

Informations de publication

Date de publication:
Sep 2021
Historique:
received: 13 02 2021
accepted: 08 05 2021
pubmed: 5 6 2021
medline: 8 9 2021
entrez: 4 6 2021
Statut: ppublish

Résumé

We have characterized the NF-YB gene family in R. communis using bioinformatics, ecotopic expression, and transcriptomics. A total of 14 RcNF-YB genes were identified in R. communis genome using the conserved NF-YB region. This number is similar to what is found in A. thaliana (13 genes) and O. sativa (11 genes), whereas it is considerably lower to what is found in P. trichocarpa (21 genes) and S. lycopersycum (29 genes). Several regulatory cis-elements were identified in the promoter region, including low temperature, defense and stress, MIC, MYB, and abscisic acid. RcNF-YB is strongly modulated by temperature and it is dependent on the stage of germination. In general, RcNF-YB genes showed higher expression levels in dry seeds and early imbibition (EI) samples as compared to later stages of seedling development. Ectopic expression of RcNF-YB8 reduced flowering time in Arabidopsis reducing the time required for the formation of the first visible bud, the time required to open the first flower, and the time required for the formation of the first visible silique. At the end of the life cycle, ectopic expression of RcNF-YB8 affected plant height (PH), silique length (SL), the total number of silique per plant, 1000-seed weight, and seed size. Our data demonstrated the role of RcNF-YB8 in flowering time, plant height and seed production, and it shows that it may constitute a key target gene for breeding superior R. communis genotypes.

Identifiants

pubmed: 34087742
pii: S0981-9428(21)00261-8
doi: 10.1016/j.plaphy.2021.05.014
pii:
doi:

Types de publication

Journal Article

Langues

eng

Sous-ensembles de citation

IM

Pagination

20-30

Informations de copyright

Copyright © 2021 Elsevier Masson SAS. All rights reserved.

Auteurs

Valdir G Neto (VG)

Laboratório de Bioquímica, Biotecnologia e Bioprodutos, Departamento de Bioquímica e Biofísica, Universidade Federal da Bahia, Reitor Miguel Calmon s/n, 40160-100, Salvador, Brazil; Metabolomics Research Group, Departamento de Química Orgânica, Instituto de Química, Universidade Federal da Bahia, Rua Barão de Jeremoabo s/n, 40170-115, Salvador, Brazil.

Renato D de Castro (RD)

Laboratório de Bioquímica, Biotecnologia e Bioprodutos, Departamento de Bioquímica e Biofísica, Universidade Federal da Bahia, Reitor Miguel Calmon s/n, 40160-100, Salvador, Brazil. Electronic address: renatodelmondez@ufba.br.

Bianca L S Lima (BLS)

Laboratório de Bioquímica, Biotecnologia e Bioprodutos, Departamento de Bioquímica e Biofísica, Universidade Federal da Bahia, Reitor Miguel Calmon s/n, 40160-100, Salvador, Brazil.

Camilo J B Vieira (CJB)

Laboratório de Bioquímica, Biotecnologia e Bioprodutos, Departamento de Bioquímica e Biofísica, Universidade Federal da Bahia, Reitor Miguel Calmon s/n, 40160-100, Salvador, Brazil.

Neucastle L Rosário (NL)

Laboratório de Bioquímica, Biotecnologia e Bioprodutos, Departamento de Bioquímica e Biofísica, Universidade Federal da Bahia, Reitor Miguel Calmon s/n, 40160-100, Salvador, Brazil.

Luzimar G Fernandez (LG)

Laboratório de Bioquímica, Biotecnologia e Bioprodutos, Departamento de Bioquímica e Biofísica, Universidade Federal da Bahia, Reitor Miguel Calmon s/n, 40160-100, Salvador, Brazil.

Eva Goudsmit (E)

Wageningen Seed Lab, Laboratory of Plant Physiology, Wageningen University (WU), Droevendaalsesteeg 1, NL-6708 PB, Wageningen, the Netherlands.

Wilco Ligterink (W)

Wageningen Seed Lab, Laboratory of Plant Physiology, Wageningen University (WU), Droevendaalsesteeg 1, NL-6708 PB, Wageningen, the Netherlands.

Henk W M Hilhorst (HWM)

Wageningen Seed Lab, Laboratory of Plant Physiology, Wageningen University (WU), Droevendaalsesteeg 1, NL-6708 PB, Wageningen, the Netherlands.

Paulo R Ribeiro (PR)

Laboratório de Bioquímica, Biotecnologia e Bioprodutos, Departamento de Bioquímica e Biofísica, Universidade Federal da Bahia, Reitor Miguel Calmon s/n, 40160-100, Salvador, Brazil; Metabolomics Research Group, Departamento de Química Orgânica, Instituto de Química, Universidade Federal da Bahia, Rua Barão de Jeremoabo s/n, 40170-115, Salvador, Brazil. Electronic address: pauloribeiro@ufba.br.

Articles similaires

Amaryllidaceae Alkaloids Lycoris NADPH-Ferrihemoprotein Reductase Gene Expression Regulation, Plant Plant Proteins
Drought Resistance Gene Expression Profiling Gene Expression Regulation, Plant Gossypium Multigene Family
Arabidopsis Arabidopsis Proteins Osmotic Pressure Cytoplasm RNA, Messenger
Genome Size Genome, Plant Magnoliopsida Evolution, Molecular Arabidopsis

Classifications MeSH