Complex evolutionary history of felid anelloviruses.

Anelloviridae / classification Animals Biological Coevolution Coinfection / veterinary DNA, Viral / genetics Felidae / classification Genetic Variation Genome, Viral / genetics Open Reading Frames Phylogeny Recombination, Genetic Sequence Analysis, DNA
Anelloviridae Bobcat Canada lynx Caracal Domestic cat Puma Torque teno virus

Journal

Virology
ISSN: 1096-0341
Titre abrégé: Virology
Pays: United States
ID NLM: 0110674

Informations de publication

Date de publication:
10 2021
Historique:
received: 08 07 2021
revised: 22 07 2021
accepted: 23 07 2021
pubmed: 8 8 2021
medline: 5 1 2022
entrez: 7 8 2021
Statut: ppublish

Résumé

Anellovirus infections are highly prevalent in mammals, however, prior to this study only a handful of anellovirus genomes had been identified in members of the Felidae family. Here we characterise anelloviruses in pumas (Puma concolor), bobcats (Lynx rufus), Canada lynx (Lynx canadensis), caracals (Caracal caracal) and domestic cats (Felis catus). The complete anellovirus genomes (n = 220) recovered from 149 individuals were diverse. ORF1 protein sequence similarity network analysis coupled with phylogenetic analysis, revealed two distinct clusters that are populated by felid-derived anellovirus sequences, a pattern mirroring that observed for the porcine anelloviruses. Of the two-felid dominant anellovirus groups, one includes sequences from bobcats, pumas, domestic cats and an ocelot, and the other includes sequences from caracals, Canada lynx, domestic cats and pumas. Coinfections of diverse anelloviruses appear to be common among the felids. Evidence of recombination, both within and between felid-specific anellovirus groups, supports a long coevolution history between host and virus.

Identifiants

DOI: 10.1016/j.virol.2021.07.013 PMID: 34364185
pubmed: 34364185
pii: S0042-6822(21)00160-4
doi: 10.1016/j.virol.2021.07.013
pii:
doi:

Substances chimiques

DNA, Viral 0

Types de publication

Journal Article Research Support, Non-U.S. Gov't Research Support, U.S. Gov't, Non-P.H.S.

Langues

eng

Sous-ensembles de citation

IM

Pagination

176-189

Informations de copyright

Copyright © 2021 Elsevier Inc. All rights reserved.

Auteurs

Simona Kraberger (S)

The Biodesign Center of Fundamental and Applied Microbiomics, School of Life Sciences, Center for Evolution and Medicine, Arizona State University, Tempe, AZ, 85287, USA. Electronic address: simona.kraberger@asu.edu.

Laurel Ek Serieys (LE)

Environmental Studies, University of California, Santa Cruz, CA, 95064, USA; Institute for Communities and Wildlife in Africa, Department of Biological Sciences, University of Cape Town, Private Bag X3, Rondebosch, Cape Town, 7701, South Africa.

Cécile Richet (C)

The Biodesign Center of Fundamental and Applied Microbiomics, School of Life Sciences, Center for Evolution and Medicine, Arizona State University, Tempe, AZ, 85287, USA.

Nicholas M Fountain-Jones (NM)

School of Natural Sciences, University of Tasmania, Hobart, 7001, Australia.

Guy Baele (G)

Department of Microbiology, Immunology and Transplantation, Rega Institute, KU Leuven, Leuven, Belgium.

Jacqueline M Bishop (JM)

Institute for Communities and Wildlife in Africa, Department of Biological Sciences, University of Cape Town, Private Bag X3, Rondebosch, Cape Town, 7701, South Africa.

Mary Nehring (M)

Department of Microbiology, Immunology & Pathology, Colorado State University, Fort Collins, CO, 80523, USA.

Jacob S Ivan (JS)

Colorado Parks and Wildlife, 317 W. Prospect Rd., Fort Collins, CO, 80526, USA.

Eric S Newkirk (ES)

Speedgoat Wildlife Solutions, Missoula, MT, 59801, USA.

John R Squires (JR)

US Department of Agriculture, Rocky Mountain Research Station, 800 E. Beckwith Ave., Missoula, MT, 59801, USA.

Michael C Lund (MC)

The Biodesign Center of Fundamental and Applied Microbiomics, School of Life Sciences, Center for Evolution and Medicine, Arizona State University, Tempe, AZ, 85287, USA.

Seth Pd Riley (SP)

Santa Monica Mountains National Recreation Area, National Park Service, Thousand Oaks, CA, 91360, USA.

Christopher C Wilmers (CC)

Environmental Studies, University of California, Santa Cruz, CA, 95064, USA.

Paul D van Helden (PD)

DSI-NRF Centre of Excellence for Biomedical Tuberculosis Research/SAMRC Centre for TB Research/Division of Molecular Biology and Human Genetics, Faculty of Medicine and Health Sciences, Stellenbosch University, Tygerberg, 7505, South Africa.

Koenraad Van Doorslaer (K)

School of Animal and Comparative Biomedical Sciences, The BIO5 Institute, Department of Immunobiology, Cancer Biology Graduate Interdisciplinary Program, UA Cancer Center, University of Arizona, Tucson, AZ, 85724, USA.

Melanie Culver (M)

U.S. Geological Survey, Arizona Cooperative Fish and Wildlife Research Unit, University of Arizona, Tucson, AZ, 85721, USA; School of Natural Resources and the Environment, University of Arizona, Tucson, AZ, 85721, USA.

Sue VandeWoude (S)

Department of Microbiology, Immunology and Transplantation, Rega Institute, KU Leuven, Leuven, Belgium.

Darren P Martin (DP)

Computational Biology Group, Institute of Infectious Diseases and Molecular Medicine, University of Cape Town, Cape Town, 7925, South Africa.

Arvind Varsani (A)

The Biodesign Center of Fundamental and Applied Microbiomics, School of Life Sciences, Center for Evolution and Medicine, Arizona State University, Tempe, AZ, 85287, USA; Structural Biology Research Unit, Department of Integrative Biomedical Sciences, University of Cape Town, 7925, Cape Town, South Africa. Electronic address: arvind.varsani@asu.edu.

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Classifications MeSH

questionsmedicales.fr › Virus › Virus non classés › Anellovirus › Complex evolutionary history of felid anelloviruses.
questionsmedicales.fr › Eucaryotes › Animaux › Complex evolutionary history of felid anelloviruses.
questionsmedicales.fr › Phénomènes biologiques › Évolution biologique › Coévolution biologique › Complex evolutionary history of felid anelloviruses.
questionsmedicales.fr › Infection › Co-infection › Complex evolutionary history of felid anelloviruses.
questionsmedicales.fr › Acides nucléiques, nucléotides et nucléosides › Acides nucléiques › ADN › ADN viral › Complex evolutionary history of felid anelloviruses.
questionsmedicales.fr › Eucaryotes › Animaux › Chordés › Vertébrés › Mammifères › Eutheria › Carnivora › Feliformia › Felidae › Complex evolutionary history of felid anelloviruses.
questionsmedicales.fr › Phénomènes génétiques › Variation génétique › Complex evolutionary history of felid anelloviruses.
questionsmedicales.fr › Phénomènes génétiques › Structures génétiques › Génome › Génome microbien › Génome viral › Complex evolutionary history of felid anelloviruses.
questionsmedicales.fr › Phénomènes génétiques › Structures génétiques › Génome › Composants de génome › Gènes › Composants de gène › Cadres ouverts de lecture › Complex evolutionary history of felid anelloviruses.
questionsmedicales.fr › Sciences de l'information › Phylogenèse › Complex evolutionary history of felid anelloviruses.
questionsmedicales.fr › Phénomènes génétiques › Recombinaison génétique › Complex evolutionary history of felid anelloviruses.
questionsmedicales.fr › Techniques d'investigation › Techniques génétiques › Analyse de séquence › Analyse de séquence d'ADN › Complex evolutionary history of felid anelloviruses.