Transcriptomic Responses to Coaggregation between Streptococcus gordonii and Streptococcus oralis.

Streptococcus gordonii Streptococcus oralis biofilms bioinformatics coaggregation oral streptococci transcriptome

Journal

Applied and environmental microbiology
ISSN: 1098-5336
Titre abrégé: Appl Environ Microbiol
Pays: United States
ID NLM: 7605801

Informations de publication

Date de publication:
28 10 2021
Historique:
pubmed: 2 9 2021
medline: 24 12 2021
entrez: 1 9 2021
Statut: ppublish

Résumé

Cell-cell adhesion between oral bacteria plays a key role in the development of polymicrobial communities such as dental plaque. Oral streptococci such as Streptococcus gordonii and Streptococcus oralis are important early colonizers of dental plaque and bind to a wide range of different oral microorganisms, forming multispecies clumps or "coaggregates." S. gordonii actively responds to coaggregation by regulating gene expression. To further understand these responses, we assessed gene regulation in S. gordonii and S. oralis following coaggregation in 25% human saliva. Coaggregates were formed by mixing, and after 30 min, RNA was extracted for dual transcriptome sequencing (RNA-Seq) analysis. In S. oralis, 18 genes (6 upregulated and 12 downregulated) were regulated by coaggregation. Significantly downregulated genes encoded functions such as amino acid and antibiotic biosynthesis, ribosome, and central carbon metabolism. In total, 28 genes were differentially regulated in Streptococcus gordonii (25 upregulated and 3 downregulated). Many genes associated with transporters and a two-component (NisK/SpaK) regulatory system were upregulated following coaggregation. Our comparative analyses of S. gordonii

Identifiants

pubmed: 34469191
doi: 10.1128/AEM.01558-21
pmc: PMC8552878
doi:

Types de publication

Journal Article Research Support, Non-U.S. Gov't

Langues

eng

Sous-ensembles de citation

IM

Pagination

e0155821

Subventions

Organisme : Wenzhou-Kean University
ID : 5000105
Organisme : NSFC International Young Scientist Fund
ID : 31750110452
Organisme : Ministry of Higher Education and Scientific Research (MHESR)
ID : PhD studentship
Organisme : Engineering and Physical Sciences Research Council (EPSRC)
ID : EP/J004111/2
Organisme : Engineering and Physical Sciences Research Council (EPSRC)
ID : EP/N031962/1

Références

J Mol Biol. 2015 Nov 20;427(23):3662-75
pubmed: 26519790
Mol Oral Microbiol. 2020 Apr;35(2):66-77
pubmed: 31994329
Adv Appl Microbiol. 2014;87:43-110
pubmed: 24581389
Appl Environ Microbiol. 2006 Apr;72(4):2837-48
pubmed: 16597990
Front Cell Infect Microbiol. 2014 Sep 12;4:127
pubmed: 25309879
Sci Rep. 2019 May 21;9(1):7664
pubmed: 31113978
Appl Environ Microbiol. 2009 Dec;75(24):7725-33
pubmed: 19837836
Nucleic Acids Res. 2019 Jan 8;47(D1):D607-D613
pubmed: 30476243
Infect Immun. 2005 Oct;73(10):6629-38
pubmed: 16177339
Biofouling. 2014;30(10):1235-51
pubmed: 25421394
Annu Rev Microbiol. 2019 Sep 8;73:335-358
pubmed: 31180804
Antimicrob Agents Chemother. 2013 Apr;57(4):1921-5
pubmed: 23318791
Bioinformatics. 2015 Jan 15;31(2):166-9
pubmed: 25260700
Appl Environ Microbiol. 2012 Jan;78(2):411-9
pubmed: 22101045
Infect Immun. 1979 Jun;24(3):742-52
pubmed: 468376
Mol Oral Microbiol. 2016 Apr;31(2):136-61
pubmed: 26042999
Carbohydr Res. 1989 Aug 15;191(2):279-93
pubmed: 2582463
Sci Rep. 2017 Jun 30;7(1):4409
pubmed: 28667274
J Oral Microbiol. 2017 Nov 27;9(1):1400858
pubmed: 29209465
Proc Natl Acad Sci U S A. 2009 Feb 3;106(5):1578-83
pubmed: 19164580
Genome Biol. 2014;15(12):550
pubmed: 25516281
Int J Syst Evol Microbiol. 2016 Nov;66(11):4803-4820
pubmed: 27534397
Front Microbiol. 2017 Feb 28;8:261
pubmed: 28293219
Proc Natl Acad Sci U S A. 2014 Jul 15;111(28):E2875-84
pubmed: 24965363
FEMS Microbiol Rev. 2010 Jul;34(4):426-44
pubmed: 20070374
FEMS Microbiol Lett. 2001 Dec 18;205(2):225-30
pubmed: 11750807
Biochem Biophys Res Commun. 2012 Mar 23;419(4):715-8
pubmed: 22386992
J Bacteriol. 2003 Jan;185(1):359-70
pubmed: 12486074
Nat Rev Microbiol. 2010 Jul;8(7):471-80
pubmed: 20514044
Microbes Environ. 2015;30(2):189-91
pubmed: 25854411
J Bacteriol. 2003 Jun;185(11):3400-9
pubmed: 12754239
J Comput Biol. 2012 May;19(5):455-77
pubmed: 22506599
FEMS Microbiol Ecol. 2018 May 1;94(5):
pubmed: 29547886
Annu Rev Biochem. 1984;53:75-117
pubmed: 6206783
BMC Microbiol. 2009 Dec 15;9:259
pubmed: 20003481
Mol Oral Microbiol. 2018 Dec;33(6):450-464
pubmed: 30329223
Cell Microbiol. 2014 Feb;16(2):214-31
pubmed: 24079976
Bioinformatics. 2009 Aug 15;25(16):2078-9
pubmed: 19505943
Sci Rep. 2017 Jun 7;7(1):2949
pubmed: 28592797
J Bacteriol. 2008 May;190(10):3646-57
pubmed: 18359813
ISME J. 2020 May;14(5):1207-1222
pubmed: 32042100
Appl Environ Microbiol. 2017 May 17;83(11):
pubmed: 28341674
Lett Appl Microbiol. 2016 Oct;63(4):274-81
pubmed: 27455031

Auteurs

Siew Woh Choo (SW)

Department of Biology, College of Science and Technology, Wenzhou-Kean University, Wenzhou, Zhejiang Province, People's Republic of China.
Zhejiang Bioinformatics International Science and Technology Cooperation Centre Wenzhou-Kean University, Wenzhou, Zhejiang Province, People's Republic of China.

Waleed K Mohammed (WK)

School of Dental Sciences, Faculty of Medical Sciences, Newcastle Universitygrid.1006.7, Newcastle upon Tyne, United Kingdom.
Department of Basic Science, College of Dentistry, University of Anbar, Ramida, Anbar, Iraq.

Naresh V R Mutha (NVR)

Institute of Biological Sciences, Faculty of Science, University of Malaya, Kuala Lumpur, Malaysia.
Center for Excellence of Clinical Microbiome Research, All India Institute of Medical Sciences, Bhubaneswar, India.

Nadia Rostami (N)

School of Dental Sciences, Faculty of Medical Sciences, Newcastle Universitygrid.1006.7, Newcastle upon Tyne, United Kingdom.

Halah Ahmed (H)

School of Dental Sciences, Faculty of Medical Sciences, Newcastle Universitygrid.1006.7, Newcastle upon Tyne, United Kingdom.

Natalio Krasnogor (N)

School of Dental Sciences, Faculty of Medical Sciences, Newcastle Universitygrid.1006.7, Newcastle upon Tyne, United Kingdom.

Geok Yuan Annie Tan (GYA)

Institute of Biological Sciences, Faculty of Science, University of Malaya, Kuala Lumpur, Malaysia.

Nicholas S Jakubovics (NS)

School of Dental Sciences, Faculty of Medical Sciences, Newcastle Universitygrid.1006.7, Newcastle upon Tyne, United Kingdom.

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Classifications MeSH