Simulating Crop Root Systems Using OpenSimRoot.
Computational modeling
Functional structural plant modeling
Mathematical modeling
Nutrient uptake
Organ growth
Plant development
Root system architecture
Journal
Methods in molecular biology (Clifton, N.J.)
ISSN: 1940-6029
Titre abrégé: Methods Mol Biol
Pays: United States
ID NLM: 9214969
Informations de publication
Date de publication:
2022
2022
Historique:
entrez:
25
11
2021
pubmed:
26
11
2021
medline:
22
1
2022
Statut:
ppublish
Résumé
Functional-structural plant models are valuable modeling tools in analyzing plant development. A functional-structural plant model combines a three-dimensional representation of plant structure with models for physiological functions in order to better understand plant development. We present a guide to simulating crop root systems with OpenSimRoot, a feature-rich, highly cited, and open-source functional-structural root architecture model. We describe in detail how to create your own input files in conjunction with some examples. The aim of this guide is to highlight the potential of computational modeling in biology and to make modeling more accessible to the plant science community.
Identifiants
pubmed: 34822160
doi: 10.1007/978-1-0716-1816-5_15
doi:
Types de publication
Journal Article
Langues
eng
Sous-ensembles de citation
IM
Pagination
293-323Informations de copyright
© 2022. Springer Science+Business Media, LLC, part of Springer Nature.
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