Altered H3 histone acetylation impairs high-fidelity DNA repair to promote cerebellar degeneration in spinocerebellar ataxia type 7.


Journal

Cell reports
ISSN: 2211-1247
Titre abrégé: Cell Rep
Pays: United States
ID NLM: 101573691

Informations de publication

Date de publication:
30 11 2021
Historique:
received: 07 01 2021
revised: 11 10 2021
accepted: 05 11 2021
entrez: 1 12 2021
pubmed: 2 12 2021
medline: 16 2 2022
Statut: ppublish

Résumé

A common mechanism in inherited ataxia is a vulnerability of DNA damage. Spinocerebellar ataxia type 7 (SCA7) is a CAG-polyglutamine-repeat disorder characterized by cerebellar and retinal degeneration. Polyglutamine-expanded ataxin-7 protein incorporates into STAGA co-activator complex and interferes with transcription by altering histone acetylation. We performed chromatic immunoprecipitation sequencing ChIP-seq on cerebellum from SCA7 mice and observed increased H3K9-promoter acetylation in DNA repair genes, resulting in increased expression. After detecting increased DNA damage in SCA7 cells, mouse primary cerebellar neurons, and patient stem-cell-derived neurons, we documented reduced homology-directed repair (HDR) and single-strand annealing (SSA). To evaluate repair at endogenous DNA in native chromosome context, we modified linear amplification-mediated high-throughput genome-wide translocation sequencing and found that DNA translocations are less frequent in SCA7 models, consistent with decreased HDR and SSA. Altered DNA repair function in SCA7 may predispose the subject to excessive DNA damage, leading to neuron demise and highlights DNA repair as a therapy target.

Identifiants

pubmed: 34852229
pii: S2211-1247(21)01548-5
doi: 10.1016/j.celrep.2021.110062
pmc: PMC8710427
mid: NIHMS1763210
pii:
doi:

Substances chimiques

Ataxin-7 0
Histones 0
Peptides 0
polyglutamine 26700-71-0

Types de publication

Journal Article Research Support, N.I.H., Extramural Research Support, Non-U.S. Gov't

Langues

eng

Sous-ensembles de citation

IM

Pagination

110062

Subventions

Organisme : NCI NIH HHS
ID : K99 CA207729
Pays : United States
Organisme : NIGMS NIH HHS
ID : T32 GM136627
Pays : United States
Organisme : NIDDK NIH HHS
ID : P30 DK063491
Pays : United States
Organisme : NEI NIH HHS
ID : R01 EY014061
Pays : United States
Organisme : NIA NIH HHS
ID : R01 AG033082
Pays : United States
Organisme : NINDS NIH HHS
ID : R35 NS122140
Pays : United States

Informations de copyright

Copyright © 2021 The Authors. Published by Elsevier Inc. All rights reserved.

Déclaration de conflit d'intérêts

Declarations of interests The authors declare no competing interests.

Références

Proc Natl Acad Sci U S A. 2005 Jun 14;102(24):8472-7
pubmed: 15932940
PLoS Genet. 2014 Aug 28;10(8):e1004563
pubmed: 25166505
Nucleic Acids Res. 2017 Jan 4;45(D1):D369-D379
pubmed: 27980099
Nat Cell Biol. 2014 Apr;16(4):293-300
pubmed: 24691255
Bioinformatics. 2020 Apr 15;36(8):2628-2629
pubmed: 31882993
Nat Genet. 1997 Sep;17(1):65-70
pubmed: 9288099
Neuron. 2003 Feb 6;37(3):383-401
pubmed: 12575948
Neuron. 2005 Jun 16;46(6):845-8
pubmed: 15953413
Ann Neurol. 2016 Jun;79(6):983-90
pubmed: 27044000
J Mol Neurosci. 2012 Jun;47(2):219-33
pubmed: 22367614
Mol Cell Biol. 2004 Nov;24(21):9305-16
pubmed: 15485900
PLoS Genet. 2008 Jun 27;4(6):e1000110
pubmed: 18584027
Mol Cell Neurosci. 2021 Jan;110:103584
pubmed: 33338633
Proc Natl Acad Sci U S A. 2008 Jan 29;105(4):1291-6
pubmed: 18216249
Neuron. 2020 Feb 19;105(4):630-644.e9
pubmed: 31859031
Hum Mol Genet. 2004 Jun 15;13(12):1257-65
pubmed: 15115762
Science. 2001 Aug 10;293(5532):1074-80
pubmed: 11498575
Mol Cell Biol. 2001 Oct;21(20):6782-95
pubmed: 11564863
BMC Bioinformatics. 2009 Feb 03;10:48
pubmed: 19192299
Nat Commun. 2013;4:1816
pubmed: 23652004
Proc Natl Acad Sci U S A. 2005 Jun 14;102(24):8478-82
pubmed: 15932941
PLoS Genet. 2017 Jan 25;13(1):e1006554
pubmed: 28121980
Nat Protoc. 2012 Sep;7(9):1728-40
pubmed: 22936215
Nucleic Acids Res. 2018 Jul 2;46(W1):W537-W544
pubmed: 29790989
PLoS Genet. 2010 Aug 12;6(8):
pubmed: 20711355
Cell Cycle. 2003 Sep-Oct;2(5):426-7
pubmed: 12963833
Neuron. 1997 Dec;19(6):1147-50
pubmed: 9427237
Genes Dev. 1999 Oct 15;13(20):2633-8
pubmed: 10541549
J Histochem Cytochem. 2008 Aug;56(8):711-21
pubmed: 18474937
Cell. 2016 Jul 28;166(3):755-765
pubmed: 27372738
J Biol Chem. 1998 Sep 11;273(37):23781-5
pubmed: 9726987
Neuron. 2001 Sep 27;31(6):913-27
pubmed: 11580893
Nat Methods. 2012 Jun 28;9(7):676-82
pubmed: 22743772
Cell Rep. 2019 Jan 29;26(5):1189-1202.e6
pubmed: 30699348
Genes Dev. 1998 Dec 15;12(24):3831-42
pubmed: 9869637
Nat Biotechnol. 2009 Jan;27(1):66-75
pubmed: 19122651
Hum Mol Genet. 2004 Jan 1;13(1):53-67
pubmed: 14613968
Annu Rev Neurosci. 2000;23:217-47
pubmed: 10845064
Nat Commun. 2016 Oct 05;7:13049
pubmed: 27703167
Eur J Hum Genet. 2000 Jan;8(1):4-18
pubmed: 10713882
In Vivo. 2008 May-Jun;22(3):305-9
pubmed: 18610740
Trends Genet. 2016 Sep;32(9):566-575
pubmed: 27450436
Genome Biol. 2008;9(9):R137
pubmed: 18798982
Curr Biol. 2002 Oct 1;12(19):1635-44
pubmed: 12361565
Nucleic Acids Res. 2012 Jul;40(13):5795-818
pubmed: 22467216
Proc Natl Acad Sci U S A. 2000 Nov 21;97(24):12957-8
pubmed: 11058149
PLoS Biol. 2006 Mar;4(3):e67
pubmed: 16494529
Mol Cell Biol. 2002 Jul;22(13):4723-38
pubmed: 12052880
Cerebellum. 2008;7(2):138-49
pubmed: 18418675
Elife. 2019 Apr 17;8:
pubmed: 30994454
Neurotherapeutics. 2019 Oct;16(4):948-956
pubmed: 31364066
Proc Natl Acad Sci U S A. 2018 Feb 20;115(8):1919-1924
pubmed: 29432181
Nat Protoc. 2016 May;11(5):853-71
pubmed: 27031497
Methods Mol Biol. 2011;791:265-86
pubmed: 21913086
Nature. 2003 Nov 13;426(6963):194-8
pubmed: 14608368

Auteurs

Pawel M Switonski (PM)

Departments of Pathology & Laboratory Medicine, Neurology, and Biological Chemistry, University of California, Irvine, Irvine, CA 92697, USA; Department of Neurology, Duke University School of Medicine, Durham, NC 27710, USA; Department of Medical Biotechnology, Institute of Bioorganic Chemistry, Polish Academy of Sciences, Noskowskiego 12/14 Str., 61-704 Poznan, Poland.

Joe R Delaney (JR)

Department of Neurology, Duke University School of Medicine, Durham, NC 27710, USA.

Luke C Bartelt (LC)

Department of Neurology, Duke University School of Medicine, Durham, NC 27710, USA.

Chenchen Niu (C)

Departments of Pathology & Laboratory Medicine, Neurology, and Biological Chemistry, University of California, Irvine, Irvine, CA 92697, USA.

Maria Ramos-Zapatero (M)

Department of Pediatrics, University of California, San Diego, La Jolla, CA 92093, USA.

Nathanael J Spann (NJ)

Department of Cellular & Molecular Medicine, University of California, San Diego, La Jolla, CA 92093, USA.

Akshay Alaghatta (A)

Department of Neurology, Duke University School of Medicine, Durham, NC 27710, USA.

Toby Chen (T)

Department of Neurology, Duke University School of Medicine, Durham, NC 27710, USA.

Emily N Griffin (EN)

Department of Cellular & Molecular Medicine, University of California, San Diego, La Jolla, CA 92093, USA.

Jaidev Bapat (J)

Department of Pediatrics, University of California, San Diego, La Jolla, CA 92093, USA.

Bryce L Sopher (BL)

Department of Neurology, University of Washington Medical Center, Seattle, WA 98195, USA.

Albert R La Spada (AR)

Departments of Pathology & Laboratory Medicine, Neurology, and Biological Chemistry, University of California, Irvine, Irvine, CA 92697, USA; Department of Neurology, Duke University School of Medicine, Durham, NC 27710, USA; UCI Institute for Neurotherapeutics, University of California, Irvine, Irvine, CA 92697, USA. Electronic address: alaspada@uci.edu.

Articles similaires

[Redispensing of expensive oral anticancer medicines: a practical application].

Lisanne N van Merendonk, Kübra Akgöl, Bastiaan Nuijen
1.00
Humans Antineoplastic Agents Administration, Oral Drug Costs Counterfeit Drugs

Smoking Cessation and Incident Cardiovascular Disease.

Jun Hwan Cho, Seung Yong Shin, Hoseob Kim et al.
1.00
Humans Male Smoking Cessation Cardiovascular Diseases Female
Humans United States Aged Cross-Sectional Studies Medicare Part C
1.00
Humans Yoga Low Back Pain Female Male

Classifications MeSH