The microbiome of cryospheric ecosystems.


Journal

Nature communications
ISSN: 2041-1723
Titre abrégé: Nat Commun
Pays: England
ID NLM: 101528555

Informations de publication

Date de publication:
02 06 2022
Historique:
received: 09 11 2021
accepted: 20 05 2022
entrez: 2 6 2022
pubmed: 3 6 2022
medline: 7 6 2022
Statut: epublish

Résumé

The melting of the cryosphere is among the most conspicuous consequences of climate change, with impacts on microbial life and related biogeochemistry. However, we are missing a systematic understanding of microbiome structure and function across cryospheric ecosystems. Here, we present a global inventory of the microbiome from snow, ice, permafrost soils, and both coastal and freshwater ecosystems under glacier influence. Combining phylogenetic and taxonomic approaches, we find that these cryospheric ecosystems, despite their particularities, share a microbiome with representatives across the bacterial tree of life and apparent signatures of early and constrained radiation. In addition, we use metagenomic analyses to define the genetic repertoire of cryospheric bacteria. Our work provides a reference resource for future studies on climate change microbiology.

Identifiants

pubmed: 35655063
doi: 10.1038/s41467-022-30816-4
pii: 10.1038/s41467-022-30816-4
pmc: PMC9163120
doi:

Types de publication

Journal Article Research Support, Non-U.S. Gov't

Langues

eng

Sous-ensembles de citation

IM

Pagination

3087

Informations de copyright

© 2022. The Author(s).

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Auteurs

Massimo Bourquin (M)

River Ecosystems Laboratory, Centre for Alpine and Polar Environmental Research (ALPOLE), École Polytechnique Fédérale de Lausanne, EPFL, Lausanne, Switzerland. massimo.bourquin@epfl.ch.

Susheel Bhanu Busi (SB)

Luxembourg Centre for Systems Biomedicine, University of Luxembourg, Campus Belval, 7, avenue des Hauts-Fourneaux, L-4362, Esch-sur-Alzette, Luxembourg.

Stilianos Fodelianakis (S)

River Ecosystems Laboratory, Centre for Alpine and Polar Environmental Research (ALPOLE), École Polytechnique Fédérale de Lausanne, EPFL, Lausanne, Switzerland.

Hannes Peter (H)

River Ecosystems Laboratory, Centre for Alpine and Polar Environmental Research (ALPOLE), École Polytechnique Fédérale de Lausanne, EPFL, Lausanne, Switzerland.

Alex Washburne (A)

Selva Analytics LLC, Bozeman, MT, 59718, USA.

Tyler J Kohler (TJ)

River Ecosystems Laboratory, Centre for Alpine and Polar Environmental Research (ALPOLE), École Polytechnique Fédérale de Lausanne, EPFL, Lausanne, Switzerland.

Leïla Ezzat (L)

River Ecosystems Laboratory, Centre for Alpine and Polar Environmental Research (ALPOLE), École Polytechnique Fédérale de Lausanne, EPFL, Lausanne, Switzerland.

Grégoire Michoud (G)

River Ecosystems Laboratory, Centre for Alpine and Polar Environmental Research (ALPOLE), École Polytechnique Fédérale de Lausanne, EPFL, Lausanne, Switzerland.

Paul Wilmes (P)

Luxembourg Centre for Systems Biomedicine, University of Luxembourg, Campus Belval, 7, avenue des Hauts-Fourneaux, L-4362, Esch-sur-Alzette, Luxembourg.
Department of Life Sciences and Medicine, Faculty of Science, Technology and Medicine, University of Luxembourg, 7, avenue des Hauts-Fourneaux, L-4362, Esch-sur-Alzette, Luxembourg.

Tom J Battin (TJ)

River Ecosystems Laboratory, Centre for Alpine and Polar Environmental Research (ALPOLE), École Polytechnique Fédérale de Lausanne, EPFL, Lausanne, Switzerland. tom.battin@epfl.ch.

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Classifications MeSH