DNA Tile Self-Assembly Guided by Base Excision Repair Enzymes.
DNA Nanotechnology
DNA Repair Enzymes
DNA Structures
DNA Tiles
Self-Assembly
Journal
Angewandte Chemie (International ed. in English)
ISSN: 1521-3773
Titre abrégé: Angew Chem Int Ed Engl
Pays: Germany
ID NLM: 0370543
Informations de publication
Date de publication:
22 08 2022
22 08 2022
Historique:
received:
07
06
2022
pubmed:
29
6
2022
medline:
19
8
2022
entrez:
28
6
2022
Statut:
ppublish
Résumé
We demonstrate here the use of DNA repair enzymes to control the assembly of DNA-based structures. To do so, we employed uracil-DNA glycosylase (UDG) and formamidopyrimidine DNA glycosylase (Fpg), two enzymes involved in the base excision repair (BER) pathway. We designed two responsive nucleic acid modules containing mutated bases (deoxyuridine or 8-oxo-7,8-dihydroguanine recognized by UDG and Fpg, respectively) that, upon the enzyme repair activity, release a nucleic acid strand that induces the self-assembly of DNA tiles into tubular structures. The approach is programmable, specific and orthogonal and the two responsive modules can be used in the same solution without crosstalk. This allows to assemble structures formed by two different tiles in which the tile distribution can be accurately predicted as a function of the relative activity of each enzyme. Finally, we show that BER-enzyme inhibitors can also be used to control DNA-tile assembly in a specific and concentration-dependent manner.
Identifiants
pubmed: 35762986
doi: 10.1002/anie.202208367
doi:
Substances chimiques
DNA
9007-49-2
Uracil-DNA Glycosidase
EC 3.2.2.-
Types de publication
Journal Article
Research Support, Non-U.S. Gov't
Langues
eng
Sous-ensembles de citation
IM
Pagination
e202208367Informations de copyright
© 2022 Wiley-VCH GmbH.
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