Mesoscale structure-function relationships in mitochondrial transcriptional condensates.

biomolecular condensates mitochondrial genome phase separation transcription vesicles

Journal

Proceedings of the National Academy of Sciences of the United States of America
ISSN: 1091-6490
Titre abrégé: Proc Natl Acad Sci U S A
Pays: United States
ID NLM: 7505876

Informations de publication

Date de publication:
11 10 2022
Historique:
entrez: 3 10 2022
pubmed: 4 10 2022
medline: 6 10 2022
Statut: ppublish

Résumé

In live cells, phase separation is thought to organize macromolecules into membraneless structures known as biomolecular condensates. Here, we reconstituted transcription in condensates from purified mitochondrial components using optimized in vitro reaction conditions to probe the structure-function relationships of biomolecular condensates. We find that the core components of the mt-transcription machinery form multiphasic, viscoelastic condensates in vitro. Strikingly, the rates of condensate-mediated transcription are substantially lower than in solution. The condensate-mediated decrease in transcriptional rates is associated with the formation of vesicle-like structures that are driven by the production and accumulation of RNA during transcription. The generation of RNA alters the global phase behavior and organization of transcription components within condensates. Coarse-grained simulations of mesoscale structures at equilibrium show that the components stably assemble into multiphasic condensates and that the vesicles formed in vitro are the result of dynamical arrest. Overall, our findings illustrate the complex phase behavior of transcribing, multicomponent condensates, and they highlight the intimate, bidirectional interplay of structure and function in transcriptional condensates.

Identifiants

pubmed: 36191226
doi: 10.1073/pnas.2207303119
pmc: PMC9565167
doi:

Substances chimiques

RNA 63231-63-0

Types de publication

Journal Article Research Support, Non-U.S. Gov't Research Support, N.I.H., Intramural Research Support, N.I.H., Extramural Research Support, U.S. Gov't, Non-P.H.S.

Langues

eng

Sous-ensembles de citation

IM

Pagination

e2207303119

Subventions

Organisme : NIGMS NIH HHS
ID : R35 GM131832
Pays : United States
Organisme : HHS | NIH | National Institute of General Medical Sciences (NIGMS)
ID : 1Fi2GM128585-01
Organisme : HHS | NIH | National Cancer Institute (NCI)
ID : 1-ZIA-BC010309
Organisme : HHS | National Institutes of Health (NIH)
ID : R01NS121114
Organisme : NINDS NIH HHS
ID : R01 NS121114
Pays : United States

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Auteurs

Marina Feric (M)

National Cancer Institute, NIH, Bethesda, MD 20892.
National Institute of General Medical Sciences, NIH, Bethesda, MD 20892.

Azadeh Sarfallah (A)

Department of Biochemistry and Molecular Biology, Thomas Jefferson University, Philadelphia, PA 19107.

Furqan Dar (F)

Department of Physics, Washington University in St. Louis, St. Louis, MO 63130.
Department of Biomedical Engineering, Center for Biomolecular Condensates, Washington University in St. Louis, St. Louis, MO 63130.

Dmitry Temiakov (D)

Department of Biochemistry and Molecular Biology, Thomas Jefferson University, Philadelphia, PA 19107.

Rohit V Pappu (RV)

Department of Biomedical Engineering, Center for Biomolecular Condensates, Washington University in St. Louis, St. Louis, MO 63130.

Tom Misteli (T)

National Cancer Institute, NIH, Bethesda, MD 20892.

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Classifications MeSH