Geometrically programmed self-limited assembly of tubules using DNA origami colloids.


Journal

Proceedings of the National Academy of Sciences of the United States of America
ISSN: 1091-6490
Titre abrégé: Proc Natl Acad Sci U S A
Pays: United States
ID NLM: 7505876

Informations de publication

Date de publication:
25 10 2022
Historique:
entrez: 17 10 2022
pubmed: 18 10 2022
medline: 20 10 2022
Statut: ppublish

Résumé

Self-assembly is one of the most promising strategies for making functional materials at the nanoscale, yet new design principles for making self-limiting architectures, rather than spatially unlimited periodic lattice structures, are needed. To address this challenge, we explore the tradeoffs between addressable assembly and self-closing assembly of a specific class of self-limiting structures: cylindrical tubules. We make triangular subunits using DNA origami that have specific, valence-limited interactions and designed binding angles, and we study their assembly into tubules that have a self-limited width that is much larger than the size of an individual subunit. In the simplest case, the tubules are assembled from a single component by geometrically programming the dihedral angles between neighboring subunits. We show that the tubules can reach many micrometers in length and that their average width can be prescribed through the dihedral angles. We find that there is a distribution in the width and the chirality of the tubules, which we rationalize by developing a model that considers the finite bending rigidity of the assembled structure as well as the mechanism of self-closure. Finally, we demonstrate that the distributions of tubules can be further sculpted by increasing the number of subunit species, thereby increasing the assembly complexity, and demonstrate that using two subunit species successfully reduces the number of available end states by half. These results help to shed light on the roles of assembly complexity and geometry in self-limited assembly and could be extended to other self-limiting architectures, such as shells, toroids, or triply periodic frameworks.

Identifiants

pubmed: 36252043
doi: 10.1073/pnas.2207902119
pmc: PMC9618141
doi:

Substances chimiques

Colloids 0
DNA 9007-49-2

Types de publication

Journal Article Research Support, Non-U.S. Gov't Research Support, U.S. Gov't, Non-P.H.S.

Langues

eng

Sous-ensembles de citation

IM

Pagination

e2207902119

Subventions

Organisme : NIGMS NIH HHS
ID : R01 GM108021
Pays : United States

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Auteurs

Daichi Hayakawa (D)

Martin A. Fisher School of Physics, Brandeis University, Waltham, MA 02453.

Thomas E Videbaek (TE)

Martin A. Fisher School of Physics, Brandeis University, Waltham, MA 02453.

Douglas M Hall (DM)

Department of Polymer Science and Engineering, University of Massachusetts, Amherst, MA 01003.

Huang Fang (H)

Martin A. Fisher School of Physics, Brandeis University, Waltham, MA 02453.

Christian Sigl (C)

Department of Physics, Technical University of Munich, 80333 Munich, Germany.

Elija Feigl (E)

Department of Physics, Technical University of Munich, 80333 Munich, Germany.

Hendrik Dietz (H)

Department of Physics, Technical University of Munich, 80333 Munich, Germany.

Seth Fraden (S)

Martin A. Fisher School of Physics, Brandeis University, Waltham, MA 02453.

Michael F Hagan (MF)

Martin A. Fisher School of Physics, Brandeis University, Waltham, MA 02453.

Gregory M Grason (GM)

Department of Polymer Science and Engineering, University of Massachusetts, Amherst, MA 01003.

W Benjamin Rogers (WB)

Martin A. Fisher School of Physics, Brandeis University, Waltham, MA 02453.

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Classifications MeSH