Federated learning enables big data for rare cancer boundary detection.
Journal
Nature communications
ISSN: 2041-1723
Titre abrégé: Nat Commun
Pays: England
ID NLM: 101528555
Informations de publication
Date de publication:
05 12 2022
05 12 2022
Historique:
received:
07
04
2022
accepted:
16
09
2022
entrez:
5
12
2022
pubmed:
6
12
2022
medline:
17
12
2022
Statut:
epublish
Résumé
Although machine learning (ML) has shown promise across disciplines, out-of-sample generalizability is concerning. This is currently addressed by sharing multi-site data, but such centralization is challenging/infeasible to scale due to various limitations. Federated ML (FL) provides an alternative paradigm for accurate and generalizable ML, by only sharing numerical model updates. Here we present the largest FL study to-date, involving data from 71 sites across 6 continents, to generate an automatic tumor boundary detector for the rare disease of glioblastoma, reporting the largest such dataset in the literature (n = 6, 314). We demonstrate a 33% delineation improvement for the surgically targetable tumor, and 23% for the complete tumor extent, over a publicly trained model. We anticipate our study to: 1) enable more healthcare studies informed by large diverse data, ensuring meaningful results for rare diseases and underrepresented populations, 2) facilitate further analyses for glioblastoma by releasing our consensus model, and 3) demonstrate the FL effectiveness at such scale and task-complexity as a paradigm shift for multi-site collaborations, alleviating the need for data-sharing.
Identifiants
pubmed: 36470898
doi: 10.1038/s41467-022-33407-5
pii: 10.1038/s41467-022-33407-5
pmc: PMC9722782
doi:
Types de publication
Journal Article
Research Support, N.I.H., Extramural
Langues
eng
Sous-ensembles de citation
IM
Pagination
7346Subventions
Organisme : Medical Research Council
ID : MR/W021684/1
Pays : United Kingdom
Organisme : NCI NIH HHS
ID : R01 CA270027
Pays : United States
Organisme : NCATS NIH HHS
ID : UL1 TR001409
Pays : United States
Organisme : NCI NIH HHS
ID : R50 CA211270
Pays : United States
Organisme : NCI NIH HHS
ID : U01 CA242871
Pays : United States
Organisme : NCI NIH HHS
ID : P50 CA211015
Pays : United States
Organisme : NIH HHS
ID : S10 OD023495
Pays : United States
Organisme : NCI NIH HHS
ID : R01 CA269948
Pays : United States
Organisme : NLM NIH HHS
ID : R01 LM013151
Pays : United States
Commentaires et corrections
Type : ErratumIn
Informations de copyright
© 2022. The Author(s).
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