A Competition, Benchmark, Code, and Data for Using Artificial Intelligence to Detect Lesions in Digital Breast Tomosynthesis.


Journal

JAMA network open
ISSN: 2574-3805
Titre abrégé: JAMA Netw Open
Pays: United States
ID NLM: 101729235

Informations de publication

Date de publication:
01 02 2023
Historique:
entrez: 23 2 2023
pubmed: 24 2 2023
medline: 3 3 2023
Statut: epublish

Résumé

An accurate and robust artificial intelligence (AI) algorithm for detecting cancer in digital breast tomosynthesis (DBT) could significantly improve detection accuracy and reduce health care costs worldwide. To make training and evaluation data for the development of AI algorithms for DBT analysis available, to develop well-defined benchmarks, and to create publicly available code for existing methods. This diagnostic study is based on a multi-institutional international grand challenge in which research teams developed algorithms to detect lesions in DBT. A data set of 22 032 reconstructed DBT volumes was made available to research teams. Phase 1, in which teams were provided 700 scans from the training set, 120 from the validation set, and 180 from the test set, took place from December 2020 to January 2021, and phase 2, in which teams were given the full data set, took place from May to July 2021. The overall performance was evaluated by mean sensitivity for biopsied lesions using only DBT volumes with biopsied lesions; ties were broken by including all DBT volumes. A total of 8 teams participated in the challenge. The team with the highest mean sensitivity for biopsied lesions was the NYU B-Team, with 0.957 (95% CI, 0.924-0.984), and the second-place team, ZeDuS, had a mean sensitivity of 0.926 (95% CI, 0.881-0.964). When the results were aggregated, the mean sensitivity for all submitted algorithms was 0.879; for only those who participated in phase 2, it was 0.926. In this diagnostic study, an international competition produced algorithms with high sensitivity for using AI to detect lesions on DBT images. A standardized performance benchmark for the detection task using publicly available clinical imaging data was released, with detailed descriptions and analyses of submitted algorithms accompanied by a public release of their predictions and code for selected methods. These resources will serve as a foundation for future research on computer-assisted diagnosis methods for DBT, significantly lowering the barrier of entry for new researchers.

Identifiants

pubmed: 36821110
pii: 2801740
doi: 10.1001/jamanetworkopen.2023.0524
pmc: PMC9951043
doi:

Types de publication

Journal Article Research Support, N.I.H., Extramural

Langues

eng

Sous-ensembles de citation

IM

Pagination

e230524

Subventions

Organisme : NIBIB NIH HHS
ID : P41 EB017183
Pays : United States
Organisme : NCI NIH HHS
ID : R37 CA248207
Pays : United States
Organisme : NCI NIH HHS
ID : 75N91019D00024
Pays : United States
Organisme : NIBIB NIH HHS
ID : R01 EB021360
Pays : United States

Commentaires et corrections

Type : CommentIn

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Auteurs

Nicholas Konz (N)

Department of Electrical and Computer Engineering, Duke University, Durham, North Carolina.

Mateusz Buda (M)

Department of Radiology, Duke University Medical Center, Durham, North Carolina.
Faculty of Mathematics and Information Science, Warsaw University of Technology, Warsaw, Poland.

Hanxue Gu (H)

Department of Electrical and Computer Engineering, Duke University, Durham, North Carolina.

Ashirbani Saha (A)

Department of Radiology, Duke University Medical Center, Durham, North Carolina.
Department of Oncology, McMaster University, Hamilton, Ontario, Canada.

Jakub Chledowski (J)

Jagiellonian University, Kraków, Poland.
Department of Radiology, NYU Grossman School of Medicine, New York, New York.

Jungkyu Park (J)

Department of Radiology, NYU Grossman School of Medicine, New York, New York.

Jan Witowski (J)

Department of Radiology, NYU Grossman School of Medicine, New York, New York.

Krzysztof J Geras (KJ)

Department of Radiology, NYU Grossman School of Medicine, New York, New York.

Yoel Shoshan (Y)

Medical Image Analytics, IBM Research, Haifa, Israel.

Flora Gilboa-Solomon (F)

Medical Image Analytics, IBM Research, Haifa, Israel.

Daniel Khapun (D)

Medical Image Analytics, IBM Research, Haifa, Israel.

Vadim Ratner (V)

Medical Image Analytics, IBM Research, Haifa, Israel.

Ella Barkan (E)

Medical Image Analytics, IBM Research, Haifa, Israel.

Michal Ozery-Flato (M)

Medical Image Analytics, IBM Research, Haifa, Israel.

Robert Martí (R)

Institute of Computer Vision and Robotics, University of Girona, Girona, Spain.

Akinyinka Omigbodun (A)

Medical and Imaging Informatics Group, Department of Radiological Sciences, David Geffen School of Medicine, University of California Los Angeles.

Chrysostomos Marasinou (C)

Medical and Imaging Informatics Group, Department of Radiological Sciences, David Geffen School of Medicine, University of California Los Angeles.

Noor Nakhaei (N)

Medical and Imaging Informatics Group, Department of Radiological Sciences, David Geffen School of Medicine, University of California Los Angeles.

William Hsu (W)

Medical and Imaging Informatics Group, Department of Radiological Sciences, David Geffen School of Medicine, University of California Los Angeles.
Department of Radiological Sciences, David Geffen School of Medicine, University of California Los Angeles.
Department of Bioengineering, University of California Los Angeles Samueli School of Engineering.

Pranjal Sahu (P)

Department of Computer Science, Stony Brook University, Stony Brook, New York.

Md Belayat Hossain (MB)

Department of Radiology, University of Pittsburgh, Pittsburgh, Pennsylvania.

Juhun Lee (J)

Department of Radiology, University of Pittsburgh, Pittsburgh, Pennsylvania.

Carlos Santos (C)

Department of Radiology, Duke University Medical Center, Durham, North Carolina.

Artur Przelaskowski (A)

Faculty of Mathematics and Information Science, Warsaw University of Technology, Warsaw, Poland.

Jayashree Kalpathy-Cramer (J)

Department of Radiology, Athinoula A. Martinos Center for Biomedical Imaging, Massachusetts General Hospital, Charlestown.

Benjamin Bearce (B)

Department of Radiology, Athinoula A. Martinos Center for Biomedical Imaging, Massachusetts General Hospital, Charlestown.

Kenny Cha (K)

US Food and Drug Administration, Silver Spring, Maryland.

Keyvan Farahani (K)

Center for Biomedical Informatics and Information Technology, National Cancer Institute, Bethesda, Maryland.

Nicholas Petrick (N)

US Food and Drug Administration, Silver Spring, Maryland.

Lubomir Hadjiiski (L)

Department of Radiology, University of Michigan, Ann Arbor.

Karen Drukker (K)

Department of Radiology, University of Chicago, Chicago, Illinois.

Samuel G Armato (SG)

Department of Radiology, University of Chicago, Chicago, Illinois.

Maciej A Mazurowski (MA)

Department of Electrical and Computer Engineering, Duke University, Durham, North Carolina.
Department of Radiology, Duke University Medical Center, Durham, North Carolina.
Department of Computer Science, Duke University, Durham, North Carolina.
Department of Biostatistics and Bioinformatics, Duke University Medical Center, Durham, North Carolina.

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