Intrinsic catalytic properties of histone H3 lysine-9 methyltransferases preserve monomethylation levels under low S-adenosylmethionine.
S-adenosylmethionine
histone
kinetics
metabolism
methyltransferase
nucleosome
Journal
The Journal of biological chemistry
ISSN: 1083-351X
Titre abrégé: J Biol Chem
Pays: United States
ID NLM: 2985121R
Informations de publication
Date de publication:
07 2023
07 2023
Historique:
received:
18
05
2023
revised:
10
06
2023
accepted:
13
06
2023
medline:
31
7
2023
pubmed:
19
6
2023
entrez:
18
6
2023
Statut:
ppublish
Résumé
S-adenosylmethionine (SAM) is the methyl donor for site-specific methylation reactions on histone proteins, imparting key epigenetic information. During SAM-depleted conditions that can arise from dietary methionine restriction, lysine di- and tri-methylation are reduced while sites such as Histone-3 lysine-9 (H3K9) are actively maintained, allowing cells to restore higher-state methylation upon metabolic recovery. Here, we investigated if the intrinsic catalytic properties of H3K9 histone methyltransferases (HMTs) contribute to this epigenetic persistence. We employed systematic kinetic analyses and substrate binding assays using four recombinant H3K9 HMTs (i.e., EHMT1, EHMT2, SUV39H1, and SUV39H2). At both high and low (i.e., sub-saturating) SAM, all HMTs displayed the highest catalytic efficiency (k
Identifiants
pubmed: 37331600
pii: S0021-9258(23)01966-X
doi: 10.1016/j.jbc.2023.104938
pmc: PMC10404681
pii:
doi:
Substances chimiques
Methyltransferases
EC 2.1.1.-
Histones
0
S-Adenosylmethionine
7LP2MPO46S
Lysine
K3Z4F929H6
Histone-Lysine N-Methyltransferase
EC 2.1.1.43
Types de publication
Journal Article
Research Support, N.I.H., Extramural
Langues
eng
Sous-ensembles de citation
IM
Pagination
104938Subventions
Organisme : NIGMS NIH HHS
ID : R37 GM059785
Pays : United States
Informations de copyright
Copyright © 2023 The Authors. Published by Elsevier Inc. All rights reserved.
Déclaration de conflit d'intérêts
Conflict of interest J. M. D. is cofounder of Galilei Biosciences and consults for Evrys Bio.
Références
Mol Biosyst. 2010 Feb;6(2):357-64
pubmed: 20094655
Genome Biol. 2005;6(8):227
pubmed: 16086857
J Biol Chem. 2013 Dec 27;288(52):36948-56
pubmed: 24214985
Trends Biochem Sci. 2020 Sep;45(9):731-747
pubmed: 32387193
EMBO Rep. 2009 Jul;10(7):769-75
pubmed: 19498464
Biochim Biophys Acta Gene Regul Mech. 2022 Jul;1865(5):194845
pubmed: 35907431
PLoS One. 2013 Jul 02;8(7):e67653
pubmed: 23844048
EMBO J. 2017 Nov 2;36(21):3175-3193
pubmed: 29021282
Mol Cell. 2020 Apr 16;78(2):210-223.e8
pubmed: 32208170
Biochemistry. 2016 Mar 22;55(11):1645-51
pubmed: 26813693
Methods Enzymol. 1999;304:3-19
pubmed: 10372352
Exp Mol Med. 2017 Apr 28;49(4):e324
pubmed: 28450737
J Biomol Screen. 2012 Jan;17(1):71-84
pubmed: 21972038
Nat Metab. 2020 Nov;2(11):1190-1203
pubmed: 33046909
Nat Commun. 2017 Nov 14;8(1):1489
pubmed: 29138400
Biochemistry. 2006 Mar 14;45(10):3272-84
pubmed: 16519522
J Biol Chem. 2005 Feb 18;280(7):5563-70
pubmed: 15590646
J Mol Biol. 2003 Nov 21;334(2):229-40
pubmed: 14607115
Cell Rep. 2020 Oct 27;33(4):108315
pubmed: 33113380
Genes Dev. 2002 Jul 15;16(14):1779-91
pubmed: 12130538
Ann N Y Acad Sci. 2016 Jan;1363:91-8
pubmed: 26647078
PLoS One. 2010 Jan 11;5(1):e8570
pubmed: 20084102
Nature. 2001 Mar 1;410(6824):116-20
pubmed: 11242053
Commun Chem. 2022 Mar 7;5(1):
pubmed: 36071790
J Med Chem. 2014 Jul 24;57(14):5975-85
pubmed: 24971742
Cell Mol Life Sci. 2006 Dec;63(23):2755-63
pubmed: 17013555
Proc Natl Acad Sci U S A. 2008 Dec 30;105(52):20659-64
pubmed: 19088188
Structure. 2013 Jan 8;21(1):98-108
pubmed: 23219879
Nat Rev Mol Cell Biol. 2022 Sep;23(9):623-640
pubmed: 35562425
Nat Struct Mol Biol. 2010 Jan;17(1):38-43
pubmed: 20023638
Biotechnol Lett. 2010 Aug;32(8):1045-52
pubmed: 20429026
J Biol Chem. 2011 Dec 2;286(48):41616-41625
pubmed: 21914792
Cell Metab. 2019 Apr 2;29(4):803-826
pubmed: 30943392
Nature. 2011 Jan 20;469(7330):343-9
pubmed: 21248841
Mol Cell. 2016 Jan 21;61(2):247-59
pubmed: 26778125
Nat Rev Genet. 2022 Sep;23(9):563-580
pubmed: 35338361
J Biol Chem. 2021 Nov;297(5):101276
pubmed: 34619147
Nat Rev Genet. 2020 Dec;21(12):737-753
pubmed: 32908249
Nat Commun. 2019 Jan 9;10(1):94
pubmed: 30626866
Mol Cell. 2003 Dec;12(6):1591-8
pubmed: 14690610
Cell. 2022 Jul 21;185(15):2690-2707
pubmed: 35868274
J Biol Chem. 2010 Oct 8;285(41):31849-58
pubmed: 20675860
J Biol Chem. 2013 May 10;288(19):13592-601
pubmed: 23539621
Nature. 2011 Feb 10;470(7333):279-83
pubmed: 21160473
Cell. 2007 May 18;129(4):823-37
pubmed: 17512414
J Biol Chem. 2006 Jul 21;281(29):20120-8
pubmed: 16702210
Cell. 2001 Nov 2;107(3):323-37
pubmed: 11701123
Cell Stress. 2021 Dec 06;6(1):1-5
pubmed: 35083422
Nature. 2009 May 7;459(7243):108-12
pubmed: 19295514
Cell Rep. 2012 Dec 27;2(6):1645-56
pubmed: 23246002
Nat Genet. 2007 Mar;39(3):311-8
pubmed: 17277777
Cell. 2012 Aug 31;150(5):948-60
pubmed: 22939622
ACS Chem Biol. 2022 Dec 16;17(12):3321-3330
pubmed: 34496208
Elife. 2015 Nov 09;4:
pubmed: 26551560
Biochim Biophys Acta. 2009 Jan;1789(1):45-57
pubmed: 18603028
Nucleic Acids Res. 2021 May 7;49(8):4750-4767
pubmed: 33856458
Cell Metab. 2017 Jan 10;25(1):27-42
pubmed: 27641100
Biochim Biophys Acta. 2015 Jan;1849(1):55-63
pubmed: 25459750
Cell Rep. 2013 Oct 17;5(1):13-20
pubmed: 24095733
Epigenetics. 2014 Dec;9(12):1596-603
pubmed: 25625844
Nat Genet. 2018 Jan;50(1):73-82
pubmed: 29255264