Distribution, assembly, and interactions of soil microorganisms in the bright coniferous forest area of China's cold temperate zone.

Amplicon sequencing Core microbiome Ecological niche Microbial biogeography Nivicolous myxomycetes Vegetation type

Journal

The Science of the total environment
ISSN: 1879-1026
Titre abrégé: Sci Total Environ
Pays: Netherlands
ID NLM: 0330500

Informations de publication

Date de publication:
01 Nov 2023
Historique:
received: 30 04 2023
revised: 06 07 2023
accepted: 07 07 2023
medline: 25 9 2023
pubmed: 13 7 2023
entrez: 12 7 2023
Statut: ppublish

Résumé

The bright coniferous forest area in the cold temperate zone of China is a terrestrial ecosystem primarily dominated by low mountain Larix gmelinii trees. Limited information is available regarding the assembly mechanisms and interactions of microbial communities in the soil in this region. This study employed high-throughput techniques to obtain DNA from myxomycetes, bacteria, and fungi in the soil, evaluated their diversity in conjunction with environmental factors, associated them with the assembly process, and explored the potential interaction relationships between these microorganisms. The findings of our study showed that environmental factors had a more significant influence on the α and β diversity of bacteria compared to myxomycetes and fungi. Microbial communities were influenced by environmental selection and geographical diffusion, although environmental selection appeared to have a more significant impact than geographical diffusion. Our study suggested that different microorganisms exhibited unique evolutionary patterns and may have different assembly modes within phylogenetic groups. Myxomycetes and fungi exhibited a similar assembly process that was mainly influenced by stochastic dispersal limitation and drift. In contrast, bacteria's assembly process was primarily influenced by stochastic drift and deterministic homogeneous selection. The community of myxomycetes and fungi is greatly influenced by spatial distribution and random events, while bacteria have a relatively stable population composition in specific regions and may also be subject to environmental constraints. Finally, this study revealed that Humicolopsis cephalosporioides, a fungus that exclusively resided in cold environments, may play a critical role as a keystone species in maintaining molecular ecological networks and was considered a core member of the microbiome.

Identifiants

pubmed: 37437627
pii: S0048-9697(23)04052-4
doi: 10.1016/j.scitotenv.2023.165429
pii:
doi:

Substances chimiques

Soil 0

Types de publication

Journal Article

Langues

eng

Sous-ensembles de citation

IM

Pagination

165429

Informations de copyright

Copyright © 2023 Elsevier B.V. All rights reserved.

Déclaration de conflit d'intérêts

Declaration of competing interest The authors declare that there is no competition of interest.

Auteurs

Gu Rao (G)

School of Life Sciences, Nanjing Normal University, 1 Wenyuan Road, Nanjing 210023, China.

Shu-Zhen Yan (SZ)

School of Life Sciences, Nanjing Normal University, 1 Wenyuan Road, Nanjing 210023, China.

Wen-Long Song (WL)

School of Life Sciences, Nanjing Normal University, 1 Wenyuan Road, Nanjing 210023, China.

Di Lin (D)

School of Life Sciences, Nanjing Normal University, 1 Wenyuan Road, Nanjing 210023, China.

Ya-Jing Chen (YJ)

School of Life Sciences, Nanjing Normal University, 1 Wenyuan Road, Nanjing 210023, China.

Shuang-Lin Chen (SL)

School of Life Sciences, Nanjing Normal University, 1 Wenyuan Road, Nanjing 210023, China. Electronic address: chenshuanglin@njnu.edu.cn.

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Classifications MeSH