Loss of N-terminal acetyltransferase A activity induces thermally unstable ribosomal proteins and increases their turnover in Saccharomyces cerevisiae.


Journal

Nature communications
ISSN: 2041-1723
Titre abrégé: Nat Commun
Pays: England
ID NLM: 101528555

Informations de publication

Date de publication:
27 07 2023
Historique:
received: 02 11 2022
accepted: 14 07 2023
medline: 31 7 2023
pubmed: 28 7 2023
entrez: 27 7 2023
Statut: epublish

Résumé

Protein N-terminal (Nt) acetylation is one of the most abundant modifications in eukaryotes, covering ~50-80 % of the proteome, depending on species. Cells with defective Nt-acetylation display a wide array of phenotypes such as impaired growth, mating defects and increased stress sensitivity. However, the pleiotropic nature of these effects has hampered our understanding of the functional impact of protein Nt-acetylation. The main enzyme responsible for Nt-acetylation throughout the eukaryotic kingdom is the N-terminal acetyltransferase NatA. Here we employ a multi-dimensional proteomics approach to analyze Saccharomyces cerevisiae lacking NatA activity, which causes global proteome remodeling. Pulsed-SILAC experiments reveals that NatA-deficient strains consistently increase degradation of ribosomal proteins compared to wild type. Explaining this phenomenon, thermal proteome profiling uncovers decreased thermostability of ribosomes in NatA-knockouts. Our data are in agreement with a role for Nt-acetylation in promoting stability for parts of the proteome by enhancing the avidity of protein-protein interactions and folding.

Identifiants

pubmed: 37500638
doi: 10.1038/s41467-023-40224-x
pii: 10.1038/s41467-023-40224-x
pmc: PMC10374663
doi:

Substances chimiques

N-Terminal Acetyltransferases EC 2.3.1.88
Ribosomal Proteins 0
N-Terminal Acetyltransferase A EC 2.3.1.254
Saccharomyces cerevisiae Proteins 0
Proteome 0
Acetyltransferases EC 2.3.1.-
N-Terminal Acetyltransferase E EC 2.3.1.258

Types de publication

Journal Article Research Support, Non-U.S. Gov't

Langues

eng

Sous-ensembles de citation

IM

Pagination

4517

Subventions

Organisme : European Research Council
ID : EPIC-XS-823839
Pays : International

Informations de copyright

© 2023. The Author(s).

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Auteurs

Ulises H Guzman (UH)

Novo Nordisk Foundation Center for Protein Research, Proteomics Program, Faculty of Health and Medical Sciences, University of Copenhagen, Copenhagen, Denmark.

Henriette Aksnes (H)

Department of Biomedicine, University of Bergen, Bergen, Norway.

Rasmus Ree (R)

Department of Biomedicine, University of Bergen, Bergen, Norway.

Nicolai Krogh (N)

Department of Cellular and Molecular Medicine, University of Copenhagen, Copenhagen, Denmark.

Magnus E Jakobsson (ME)

Novo Nordisk Foundation Center for Protein Research, Proteomics Program, Faculty of Health and Medical Sciences, University of Copenhagen, Copenhagen, Denmark.
Department of Immunotechnology, Lund University, Lund, Sweden.

Lars J Jensen (LJ)

Novo Nordisk Foundation Center for Protein Research, Proteomics Program, Faculty of Health and Medical Sciences, University of Copenhagen, Copenhagen, Denmark.

Thomas Arnesen (T)

Department of Biomedicine, University of Bergen, Bergen, Norway. thomas.arnesen@uib.no.
Department of Biosciences, University of Bergen, Bergen, Norway. thomas.arnesen@uib.no.
Department of Surgery, Haukeland University Hospital, Bergen, Norway. thomas.arnesen@uib.no.

Jesper V Olsen (JV)

Novo Nordisk Foundation Center for Protein Research, Proteomics Program, Faculty of Health and Medical Sciences, University of Copenhagen, Copenhagen, Denmark. jesper.olsen@cpr.ku.dk.

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Classifications MeSH