Genome-Wide Analysis of Stress-Responsive Genes and Alternative Splice Variants in


Journal

International journal of molecular sciences
ISSN: 1422-0067
Titre abrégé: Int J Mol Sci
Pays: Switzerland
ID NLM: 101092791

Informations de publication

Date de publication:
26 Sep 2023
Historique:
received: 23 07 2023
revised: 05 09 2023
accepted: 25 09 2023
medline: 23 10 2023
pubmed: 14 10 2023
entrez: 14 10 2023
Statut: epublish

Résumé

Plant roots show distinct gene-expression profiles from those of shoots under abiotic stress conditions. In this study, we performed mRNA sequencing (mRNA-Seq) to analyze the transcriptional profiling of

Identifiants

pubmed: 37834024
pii: ijms241914580
doi: 10.3390/ijms241914580
pmc: PMC10573044
pii:
doi:

Substances chimiques

Sodium Chloride 451W47IQ8X
Abscisic Acid 72S9A8J5GW
Mannitol 3OWL53L36A
RNA, Messenger 0

Types de publication

Journal Article

Langues

eng

Sous-ensembles de citation

IM

Subventions

Organisme : National Research Foundation of Korea
ID : 2020R1I1A3065749
Organisme : National Research Foundation of Korea
ID : 2020R1I1A1A01065816

Références

Plant Cell. 2003 Feb;15(2):509-22
pubmed: 12566588
J Exp Bot. 2006;57(1):201-12
pubmed: 16339784
Plant Cell Physiol. 2016 Apr;57(4):764-75
pubmed: 26556649
J Exp Bot. 2008;59(12):3317-25
pubmed: 18648104
Plant Cell Physiol. 2013 Jul;54(7):1041-55
pubmed: 23592587
Plant Cell. 2013 Oct;25(10):3640-56
pubmed: 24179132
Plant J. 2010 Mar;61(6):1041-52
pubmed: 20409277
Plant Cell. 1998 Aug;10(8):1391-406
pubmed: 9707537
Int J Mol Sci. 2020 Feb 26;21(5):
pubmed: 32111079
Plant J. 2007 Jan;49(2):184-93
pubmed: 17156413
Trends Plant Sci. 2012 Oct;17(10):616-23
pubmed: 22743067
Cell. 2016 Oct 6;167(2):313-324
pubmed: 27716505
Plant J. 2008 Aug;55(3):455-66
pubmed: 18410480
Plant Cell Rep. 2022 Jul;41(7):1549-1560
pubmed: 35562569
BMC Plant Biol. 2006 Oct 12;6:25
pubmed: 17038189
Bioinformatics. 2011 Nov 15;27(22):3209-10
pubmed: 21976420
J Exp Bot. 2023 Mar 28;74(6):1940-1956
pubmed: 36651677
J Exp Bot. 2007;58(2):221-7
pubmed: 17075077
J Exp Bot. 2000 Sep;51(350):1575-84
pubmed: 11006308
Nat Protoc. 2009;4(1):44-57
pubmed: 19131956
Heliyon. 2019 Nov 29;5(11):e02614
pubmed: 31844689
Plant Cell. 2016 Sep;28(9):2291-2311
pubmed: 27495812
Plant Cell Physiol. 2015 May;56(5):930-42
pubmed: 25657344
Plant Cell. 2012 Aug;24(8):3278-95
pubmed: 22942380
New Phytol. 2017 Oct;216(1):163-177
pubmed: 28726305
Plants (Basel). 2021 Sep 18;10(9):
pubmed: 34579478
Annu Rev Plant Biol. 2006;57:781-803
pubmed: 16669782
PLoS One. 2013 Oct 10;8(10):e77261
pubmed: 24130868
J Exp Bot. 2002 Jan;53(366):33-7
pubmed: 11741038
Sci Rep. 2021 Oct 21;11(1):20867
pubmed: 34675221
Mol Plant. 2015 Jul;8(7):1038-52
pubmed: 25617718
Plant Cell. 2008 Jul;20(7):1879-98
pubmed: 18612099
Front Plant Sci. 2016 Feb 23;7:180
pubmed: 26941754
Plant J. 2014 Jan;77(1):136-45
pubmed: 24180429
PLoS One. 2015 Mar 24;10(3):e0121222
pubmed: 25803026
Plant Physiol. 2000 Mar;122(3):967-76
pubmed: 10712561
Ann Bot. 2009 Feb;103(4):551-60
pubmed: 18662937
Plant Cell Environ. 2017 Dec;40(12):2958-2971
pubmed: 28857190
Genome Res. 2003 Nov;13(11):2498-504
pubmed: 14597658
Plant Cell. 2001 Sep;13(9):2063-83
pubmed: 11549764
Annu Rev Plant Biol. 2008;59:651-81
pubmed: 18444910
Nat Rev Genet. 2009 Jan;10(1):57-63
pubmed: 19015660
Bioinformatics. 2009 May 1;25(9):1105-11
pubmed: 19289445
Nature. 2010 Jan 28;463(7280):457-63
pubmed: 20110989
Plants (Basel). 2022 May 21;11(10):
pubmed: 35631794
New Phytol. 2011 Mar;189(4):1122-1134
pubmed: 21087263
New Phytol. 2005 Sep;167(3):645-63
pubmed: 16101905
Plant Cell. 2013 Oct;25(10):3657-83
pubmed: 24179125
Plant Cell. 1995 Dec;7(12):2023-2037
pubmed: 12242367
Biotechnol Adv. 2009 Jan-Feb;27(1):84-93
pubmed: 18950697
Genome Biol. 2011;12(3):R22
pubmed: 21410973
Protein Sci. 2020 Jan;29(1):28-35
pubmed: 31423653
Plant J. 1998 Dec;16(6):681-7
pubmed: 10069075
Plant Mol Biol. 2006 May;61(1-2):95-109
pubmed: 16786294
Curr Opin Plant Biol. 2014 Oct;21:133-139
pubmed: 25104049
Plant Cell Physiol. 2007 Aug;48(8):1170-81
pubmed: 17602187
Trends Plant Sci. 2018 Feb;23(2):140-150
pubmed: 29074233

Auteurs

Hye-Yeon Seok (HY)

Korea Nanobiotechnology Center, Pusan National University, Busan 46241, Republic of Korea.

Sun-Young Lee (SY)

Korea Nanobiotechnology Center, Pusan National University, Busan 46241, Republic of Korea.

Swarnali Sarker (S)

Department of Integrated Biological Science, Pusan National University, Busan 46241, Republic of Korea.

Md Bayzid (M)

Department of Integrated Biological Science, Pusan National University, Busan 46241, Republic of Korea.

Yong-Hwan Moon (YH)

Department of Integrated Biological Science, Pusan National University, Busan 46241, Republic of Korea.
Department of Molecular Biology, Pusan National University, Busan 46241, Republic of Korea.
Institute of Systems Biology, Pusan National University, Busan 46241, Republic of Korea.

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Classifications MeSH